BGIOSGA019815

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Revision as of 02:58, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019815| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019815, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA019815

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019815, complete gene.

LocusTag

OSJNBA0014C03.6

Ensembl Transcript ID

BGIOSGA019815-TA

Ensembl Protein ID

BGIOSGA019815-PA

Length

4608

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20364634..20369241

Sequence Coding Region

20364634..20364647,20364966..20365756,20367161..20367336,20368068..20368291,20368449..20369241

Genome Context

<gbrowseImage1> name=IndicaChromosome05:20364634..20369241 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:20364634..20369241 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGTGCGCGCAGTCGCCCGCGAAGATCCACCGGTCCAAGAGCATGCCCCTGCCCCCGCAGACCAAGGGCCCCGCGGTGCTCCACAGCGACTCGATTAGGGAGGATGACGAGGAGGAGGCGGAGATAGAGGAGGAAGAGGACGAGGACGAGCATCTCGATGACCGGCGGCGGAGGCTGCGTCACCGGCCGCAGGTACCGCCGCTCGTGTCTTCGCCCGCACCGGGAACGCCGGTGACGCCTCAGCCGCCGCCGCCGCCGCCGCCGCCTCCACCGGACTCGAAGCCCGGAGTTGACACGTGGGACTATTTCTTCTCCATGGACGAGGGGATGGCCTCCATTGCCCCCGACGACGACGAGATCATCCAGGAGCCAGAAGACGAGAAGTATGTCCCTGCCTCGCCGCCGCGCCCTCCCCTTTCCCCTCCTACCCCGGTAGCAGCGCCGGCGCCACAGGAGGAGTTTGAGGAAGATCCACGGACGCCGGAGATGGTCACGCCGCCGCCATCGCTCCCGCCAAGGCCGCCTGCGGTGTCGTCCAAGAAGAAGAAGGGGAAGGGGAAGGGGAAGCATAGGGCGGCGCACCACCAGCACACGGAGTCGGCGCCGCCGGTCACATTAGTCGGCGGCGGCGGGGGAAAGGCCGGGAAGGTGGTCCCCGTCGAGTTGCCGCGCATCGATCTTCTGCGGGTGCTCGCCGAGATCGACGACAGGTTCCTCAAGGCGTCGGAGAGCGCCGGGGAGGTGTCCAAGGTTCTGGAGGCCAACAGGATGCATTACCACTCCAATTTCGTTGACACCCGAGGGCACATCGATCATTCTGCTAGAGTCATGAAGATCATAACATGGAATAGATCCTTCAGAGCCATGCAAAATGGAGATGATGGGAAGGACGACTTTGAAAATGATGAATGGGAGACTTTGGCAACTGTCATAGATAAAATTTTAGCCTGGGAGAAAAAGCTCTATGACGAAGTGAAGGCTGGGGAGCTTATGAAACTTGAATATCAAAGGAAGGTTGCTTTGTTAAATAGACAAAAGAAACACAATGCTGCCACTGAGGTTCTGGAGAAGACTAAAGCTGCTGTAACCCATTTACACACAAGATACATAGTTGATATGCAATCAATGGATTCAACTGTGTCAGAAATTCAACATCTCCGTGATAATCAACTTTATCCAAGACTTTTGGATCTTGCTGACAGGATGGCAAAAATGTGGGAGGACATGCACCTGCACCATGAAAACCAGCTGAAAACTGTGTTAAATCTGAAGTCAGTTGACATTTCTGATTCCCATATTGAAACAAGTGATCATCACCACAGCCACACACGCCAGCTGCGTGATATTGTTGAAAAGTGGACCACAAATTTTAGCGATCTCATGAGTTATCAAAAGGAGTACATAAATGCTCTATATAGCTGGCTGAAACTGAACCTTATACCCATAGAGAGCAGCTTAAAGGAGAAAGTAGCATCTCCACCCAGGGTGCAGCAACCTCCTGTTAAAGCCCTCCTCCAAGCGTGGAATGAACATCTAACCAAGCTGCCTGATGATCTTGCCAAGACTGCCATTGTCAGTTTTAGGGCAGTCCTGGACACCATATTAAGTGTTCAAGATGAAGAGTTGAAACAAAAGGAGACTTGTGAACACACTCGCAAGGAATACATGCGGAAGGCTCGGGCTTTTGAGGATTGGTATCACAAGCACGCACAGCGCAGGGCGTTCGACGTTGATCCAGAGAGTGGCGAGGGGACAAGCCAAAAGGACACAGTTGCGGAGAAGAGATTTGCCGTGGAGAGCTTGAAGAACAAGCTGGACGACGAGGTCGAAGCCCACAACAAGCTGTCGAAGCAAGTCAGGGAGAAGTCCCTTTCGATCCTGAAAGCGCACCTGCCTGAGTTGTTCCGTGCCCTCACCGACTTCTCTCTTGCTTCTTTCGAGATATACTCGAAGATGAGGTTGATGTCACTCATGCAGGATCAGGGTAACAACTAG</cdnaseq>

Protein Sequence

<aaseq>MGCAQSPAKIHRSKSMPLPPQTKGPAVLHSDSIREDDEEEAEIEEEEDEDEHLDDRRRRLRHRPQVPPLVSSPAPGTPVTPQPPPPPPPPPPDSKPGVDTWDYFFSMDEGMASIAPDDDEIIQEPEDEKYVPASPPRPPLSPPTPVAAPAPQEEFEEDPRTPEMVTPPPSLPPRPPAVSSKKKKGKGKGKHRAAHHQHTESAPPVTLVGGGGGKAGKVVPVELPRIDLLRVLAEIDDRFLKASESAGEVSKVLEANRMHYHSNFVDTRGHIDHSARVMKIITWNRSFRAMQNGDDGKDDFENDEWETLATVIDKILAWEKKLYDEVKAGELMKLEYQRKVALLNRQKKHNAATEVLEKTKAAVTHLHTRYIVDMQSMDSTVSEIQHLRDNQLYPRLLDLADRMAKMWEDMHLHHENQLKTVLNLKSVDISDSHIETSDHHHSHTRQLRDIVEKWTTNFSDLMSYQKEYINALYSWLKLNLIPIESSLKEKVASPPRVQQPPVKALLQAWNEHLTKLPDDLAKTAIVSFRAVLDTILSVQDEELKQKETCEHTRKEYMRKARAFEDWYHKHAQRRAFDVDPESGEGTSQKDTVAEKRFAVESLKNKLDDEVEAHNKLSKQVREKSLSILKAHLPELFRALTDFSLASFEIYSKMRLMSLMQDQGNN</aaseq>

Gene Sequence

<dnaseqindica>1..14#333..1123#2528..2703#3435..3658#3816..4608#ATGGGGTGCGCGCAGTCGCGGATCGAGAACGAGGAGGCGGTGGCGCGATGCAAGGAGCGGAGGCAGTGGATGAAGTCGGCCGTGCAGGCGCGGAACGCGTTCGCGGCGGCGCACTCGGCGTACGCCATGTCGCTGCGGGACACGGGCGCCGAGCTCTCCGAGTTCGCGCACGGGGAGGGCGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATCGACACGCTGCCGCCGCCCCCGCCGCCGCTCCCGGAGTTCTCGCCGTCGCCCGCGAAGATCCACCGGTCCAAGAGCATGCCCCTGCCCCCGCAGACCAAGGGCCCCGCGGTGCTCCACAGCGACTCGATTAGGGAGGATGACGAGGAGGAGGCGGAGATAGAGGAGGAAGAGGACGAGGACGAGCATCTCGATGACCGGCGGCGGAGGCTGCGTCACCGGCCGCAGGTACCGCCGCTCGTGTCTTCGCCCGCACCGGGAACGCCGGTGACGCCTCAGCCGCCGCCGCCGCCGCCGCCGCCTCCACCGGACTCGAAGCCCGGAGTTGACACGTGGGACTATTTCTTCTCCATGGACGAGGGGATGGCCTCCATTGCCCCCGACGACGACGAGATCATCCAGGAGCCAGAAGACGAGAAGTATGTCCCTGCCTCGCCGCCGCGCCCTCCCCTTTCCCCTCCTACCCCGGTAGCAGCGCCGGCGCCACAGGAGGAGTTTGAGGAAGATCCACGGACGCCGGAGATGGTCACGCCGCCGCCATCGCTCCCGCCAAGGCCGCCTGCGGTGTCGTCCAAGAAGAAGAAGGGGAAGGGGAAGGGGAAGCATAGGGCGGCGCACCACCAGCACACGGAGTCGGCGCCGCCGGTCACATTAGTCGGCGGCGGCGGGGGAAAGGCCGGGAAGGTGGTCCCCGTCGAGTTGCCGCGCATCGATCTTCTGCGGGTGCTCGCCGAGATCGACGACAGGTTCCTCAAGGCGTCGGAGAGCGCCGGGGAGGTGTCCAAGGTTCTGGAGGCCAACAGGATGCATTACCACTCCAATTTCGTTGACACCCGAGGTCAGTGATTTGATTGCTCCTTGATACTTGCGGTTTTGGAAGTTTTAGTCCCCAAAGTGGGGGGCTTTGTGCCTGTCGCTATGATTTAATCATAAGAATTTGATCTTTTTGGGTGATGGCGATAGCGGCGTGATGGATTCTTGGGTTGATAGAGACCAAAAACTAGTTTCTTGAGGTTGGTGGTAGTGGTGGGCTCTGCTTGGGCAGGCACGTGAGCTGTCCAAACCCCACAATTCCATTTCTCCAAATTGGATGCTCCTGTAGTAGCAGCTAGCAAGCTATAGGAAAGAAGAGATTTTTTGACACAACCATTGGTTTGAGTTACAAATATACAATGCATATCTTGATGGATTTTGATTATGAGGGTCCAAAGAATCCATTTGGACGACACATTCTACTGATTGAAATTAGCATACAAATGACATTCTGGGGTATAACCTATTCAATAATCAATAAAACCTTTCAGTGTACGATGATCAAGAAGACCTGATATTTTTCCTCTCTTTGTTTCAATTTTAGTGCCATATCCAGTATCTATGCATGTTAATAATGAAGAAATGTGTGCTCGTAATTATAAATAGCACACAAGAAGCTTGGGTCCATTTGAAGAATTATGGATGTGCTACAGGGTACTTACAAGCAGGAATGGCTGAATTAATGCGTTGTTATATGTTTGGAATGCACAGCTAGAAGACTCTTTGCTGCTCTCACTGAAAGAATTATGCACAAATTTTAAAGAATGTGTTTGGAAGGGATAGAAACACTACTAATTGTTGAGGGTCAGAAAACCATTGCACACTGTGTTCAGCACACACAGAGGGTAGGCTTGGGACTGCTGGTTTATGCTGTAGCACTAGATATCTTATACACATTCCAGTTACTCCATCACTAAATACAATTCCTGTTGGACTTCACATGATTGCTGTTGTCAGTTTCTCACTTCTATTCAGGTTGGCCATGATTCTTGATAAGAGAAAGCTGAGCGACCTTTCCAATTTTAAATTAAAACTCTATATACACAAATAAGATTCAGCTTAAATTTTAATCAGGAACAAAGGTTAAGATTGAGCTGGTTAGAGCGTACTGAATTATCCCCTTTTGTTTCACTGTTTCTACCCAGTTTTGATATATTGTTCCGCGCCATGCACTCATTTCTGGATTGAGTCAATTTAATTAATTTTGAAACGCAAGCATTTTTCTTATCTTCTGATTAATATATTATAGTAACATTGCTGATCTTGTCTATTCTTCATACAATATAAGTTTTGAAATTAATGGACATCCTCAAATGATAACAATCCTTTCCAATATCTTTATGTTCAGTTATATATTTGTAAATACACGAGTGTAAATGACCTTCTAACTGATTTTTTAAATTTATTTTCATGACATCTTTTTTAACAGGGCACATCGATCATTCTGCTAGAGTCATGAAGATCATAACATGGAATAGATCCTTCAGAGCCATGCAAAATGGAGATGATGGGAAGGACGACTTTGAAAATGATGAATGGGAGACTTTGGCAACTGTCATAGATAAAATTTTAGCCTGGGAGAAAAAGCTCTATGACGAAGTGAAGGTGCTACTCATTCCTTTGATAAAAATAATGTGTGTTTTTTCTGCTAGAAATTTGAACTTCTACAGTACTAGTTTGAAGAAGTTTTGCAATAACAGACATTCTAATATTTATTCTCTACTAGAGTATTAGATGGAATTATATTACCAAGTTCTACTGATTTTTTCTTTCTTCTCTGTGCCTTGTTCAAAGCATCAAGTTGAGAGTAGTTCAAAGCATCAAGTTGAGAGTAAGCCTTAATACATATAATTACTAGGACAAATGTATACATGCGAGAATGTACAATAATGTGGCAGAACACTTCATAATATTACGTGATACTATATATTATTGATACATTGAGTTATCGTAGTACACGATTTACCATTGATTTGTTAGCGTTTTATGCATACCATTTTAATACTTCAATTCAAAATGGATATTGTAAATCTTTTCTGACAGTGATGATGGTTCTCATTTGGAAAATAACATACAAGGAATTCATATATACCATGATTTAGTCTGTTACCACCTGTGGTTAGTACAAATGAAGTTGGCAATAATCCAGCAGGTGGTAGGGGTTCTGAAAAATATGTTCCAAATGAAAATAATCATGAACTTCAAGGTAGCATCATAGTAAAGGAGAAAAGGATCAAAATAGTTGTTGATCAAATAATTAATTGATGCTGTAGCTATTCCACAGTATCCTTGTTGACTTGTACTGTCTAACAACACTTGATGCCTCAATTGCACAGGCTGGGGAGCTTATGAAACTTGAATATCAAAGGAAGGTTGCTTTGTTAAATAGACAAAAGAAACACAATGCTGCCACTGAGGTTCTGGAGAAGACTAAAGCTGCTGTAACCCATTTACACACAAGATACATAGTTGATATGCAATCAATGGATTCAACTGTGTCAGAAATTCAACATCTCCGTGATAATCAACTTTATCCAAGACTTTTGGATCTTGCTGACAGGTAATTTAGATGCATGATGCAGCTTTACCATGAATGATATTTCTAGTATTGTGACCATTGGTTTTTTTTATTGTGCTTTAAAAACATTTAGTTCTCTTATGAATAGATCTGGCAAGTCACGACCCTTTACATTCTTCATTTGGTGCTATGCTTTCAGGATGGCAAAAATGTGGGAGGACATGCACCTGCACCATGAAAACCAGCTGAAAACTGTGTTAAATCTGAAGTCAGTTGACATTTCTGATTCCCATATTGAAACAAGTGATCATCACCACAGCCACACACGCCAGCTGCGTGATATTGTTGAAAAGTGGACCACAAATTTTAGCGATCTCATGAGTTATCAAAAGGAGTACATAAATGCTCTATATAGCTGGCTGAAACTGAACCTTATACCCATAGAGAGCAGCTTAAAGGAGAAAGTAGCATCTCCACCCAGGGTGCAGCAACCTCCTGTTAAAGCCCTCCTCCAAGCGTGGAATGAACATCTAACCAAGCTGCCTGATGATCTTGCCAAGACTGCCATTGTCAGTTTTAGGGCAGTCCTGGACACCATATTAAGTGTTCAAGATGAAGAGTTGAAACAAAAGGAGACTTGTGAACACACTCGCAAGGAATACATGCGGAAGGCTCGGGCTTTTGAGGATTGGTATCACAAGCACGCACAGCGCAGGGCGTTCGACGTTGATCCAGAGAGTGGCGAGGGGACAAGCCAAAAGGACACAGTTGCGGAGAAGAGATTTGCCGTGGAGAGCTTGAAGAACAAGCTGGACGACGAGGTCGAAGCCCACAACAAGCTGTCGAAGCAAGTCAGGGAGAAGTCCCTTTCGATCCTGAAAGCGCACCTGCCTGAGTTGTTCCGTGCCCTCACCGACTTCTCTCTTGCTTCTTTCGAGATATACTCGAAGATGAGGTTGATGTCACTCATGCAGGATCAGGGTAACAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019815