BGIOSGA019816

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Revision as of 02:58, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019816| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019816, complete gene.| tag = OsI_198...")
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Gene Name

BGIOSGA019816

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019816, complete gene.

LocusTag

OsI_19855

Ensembl Transcript ID

BGIOSGA019816-TA

Ensembl Protein ID

BGIOSGA019816-PA

Length

5215

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20393788..20399002

Sequence Coding Region

20393788..20394101,20394262..20394411,20395190..20395325,20395464..20395565,20395798..20395917
,20396042..20396122,20396283..20396623,20397538..20397831,20397943..20398267
,20398409..20398642,20398748..20399002

Genome Context

<gbrowseImage1> name=IndicaChromosome05:20393788..20399002 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:20393788..20399002 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTTCTCTCACAGATATCGGCGTCGCCGCAGGAATAAACATACTGTCCGCATTGGGTTTTCTTCTCGCATTTGCGGTTCTCAGGATACAGCCTATCAACGACAGGGTCTACTTTCCCAAATGGTACCTCAAAGGGACAAGAAGCAGCCCAAGAAGCATGGGAACGGTTTTCTCAAAGTTTGTCAATGCTGATCTCTCGACGTATATCCGCTTCCTGAATTGGATGCCTGCAGCGCTGCAAATGCCTGAGCCCGAGTTGATTGAGCACGCAGGCCTCGACTCCGCGGTATATGTCCGCATATATCTTCTTGGGTTAAAAATATTTGTGCCGATTGCTGTGCTGGCATTCATTGTCCTTGTTCCTATCAACTGGGCTAGTGGAACTTTGGAGAAGGAAAAGAGTCTAAGTTATGATCAAATTGACAAGCTTTCAATATCTAACCTTGGAAAAGGATCGAAAAGATTTTGGGCACACATAGTGATGGCCTATGTATTTACGTTTTGGACGTTTTTCGTGTTGTATCGTGAATACAAGGTTGTAACAACTATGAGATTGCGCTTTCTTGCTATTCAGAATCGTCGAGCTGATCAGTTTACGGTCCTGGTGAGAAATGTACCACCTGACCCAGATGAAACAGTTAGTGAGCATGTTGAGCACTTCTTTGCTGTCAATCATCGTGATCATTATCTCAGTCACCAGACCGTATACAATGCAAACACCCTTGCCGGTTTGGTTGAGCAGAAGAAAGGCTTGCAAAACTGGCTGGTCTACTACGAAAACCAGCATGCTAAAAACCCTGCAAAAAAACCAACTATGAAGACAGGATTGTGGGGCCTTTGGGGGAAAAGAGTGGATGCTATAGAACACTACACCACTGCCATTGAGGAGTTATGCAAACAGGAAGATGAGGAGAGACACAAGGTGATCACTGATCCTAATGCTATTATGCCAGCTGCATTTGTATCTTTCAAAAGCCGGTGGGGAGCTGCTGTTTGCGCTCAAACGCAACAGACGAGCAATCCAACGTTGTGGCTTACCGAGTGGGCCCCAGAACCTCGGGATGTTTTCTGGCCTAATCTCGCGATCCCTTTCGTCGAGCTCTCAGTCCGGAGGCTTATCATGGCCGTTGCACTCTTCTTTCTGACCTTTTTCTTCATGATTCCAATTGCAATTGTCCAATCAATGGCAAACTTGGATGACATTGAACGGATGCTTCCTTTCCTGAAACCTATAATAGAAAGAAATTCACTGAAGTCAATTGTGCAAGGTTTCTTGCCAGGAATCGCATTGAAAATCTTCCTTATACTTCTCCCAACATTTCTTGTGATGATGAGCAAAATTGAAGGTCATACATCACTATCTGGATTGGACAGGAGGACTGCGTCGAAGTATTATTTGTTCCTATTTGTCAATGTGTTCTTGGGGAGTGTAATAACTGGAACAGCGTTCCAACAACTCAACAATTTTATCCATCAGTCAGCTAATAAGTATGCTCAATCTGTCATTGCTTCTTTGTTATGGATGTGGGTTAGGGGAATTCCAGAGATTGTCGGAGAATCCATCCCCATGAAAGCAACATTTTTCATCACATATGTAATGGTTGATGGCTGGGCTGGTGTTGCCGCTGAGGTTCTTAGGTTGAAGCCATTGGTCATGTTCCATATAAAGAATACTTTCTTGGTCAGAACCGAGCGAGATCGAGAGCAGGCCATGGACCCTGGGAGCCTGGATTTTGGCACCACAGAACCAAGGATACAACTGTACTTTCTGCTTGGGCTTGTATATGCTGTCGTGACACCAATTCTTCTACCTTTCATCATAGTGTTCTTTAGCCTTGCCTATCTAGTATTCAGACACCAGATCATTAATGTCTACAATCAGCAATATGAGAGTGGCGCGCAATTCTGGCCAGATGTCCAAAGACGACTGGTTATAGCATTGATAGTATCACAAATCCTCCTGTTGGGACTGCTGAGCACGCAGGAAGCAGAGAAATCCACTGTTGCTCTTCTTCCTCTTCCTGTACTGTCCATATGGTTCCACTATGTTTGCAAGGGCCGCTTTGAGCCAGCGTTTATAAAGTTCCCCCTGCAGGATGCAATGGTAAAGGATACACTGGAACGGGCAAATGACCCAACCCTGAATTTGAGAGAGTACCTGAAGGATGCATATGTGCACCCAGTGTTCCAAAAAAATGACATATATGAGTTTGCTGGCATCGACGAGGAAGAGAAGAACCCCATGGTTGCAACGAAGCGCCAATCGCGAATGAACACACCAGTAGATAGCAAGTTCAATTCCAGTTCTGGCACTAATGAAGGAGAGTTCAGTCGGATGGCTCCTACCTGA</cdnaseq>

Protein Sequence

<aaseq>MGSLTDIGVAAGINILSALGFLLAFAVLRIQPINDRVYFPKWYLKGTRSSPRSMGTVFSKFVNADLSTYIRFLNWMPAALQMPEPELIEHAGLDSAVYVRIYLLGLKIFVPIAVLAFIVLVPINWASGTLEKEKSLSYDQIDKLSISNLGKGSKRFWAHIVMAYVFTFWTFFVLYREYKVVTTMRLRFLAIQNRRADQFTVLVRNVPPDPDETVSEHVEHFFAVNHRDHYLSHQTVYNANTLAGLVEQKKGLQNWLVYYENQHAKNPAKKPTMKTGLWGLWGKRVDAIEHYTTAIEELCKQEDEERHKVITDPNAIMPAAFVSFKSRWGAAVCAQTQQTSNPTLWLTEWAPEPRDVFWPNLAIPFVELSVRRLIMAVALFFLTFFFMIPIAIVQSMANLDDIERMLPFLKPIIERNSLKSIVQGFLPGIALKIFLILLPTFLVMMSKIEGHTSLSGLDRRTASKYYLFLFVNVFLGSVITGTAFQQLNNFIHQSANKYAQSVIASLLWMWVRGIPEIVGESIPMKATFFITYVMVDGWAGVAAEVLRLKPLVMFHIKNTFLVRTERDREQAMDPGSLDFGTTEPRIQLYFLLGLVYAVVTPILLPFIIVFFSLAYLVFRHQIINVYNQQYESGAQFWPDVQRRLVIALIVSQILLLGLLSTQEAEKSTVALLPLPVLSIWFHYVCKGRFEPAFIKFPLQDAMVKDTLERANDPTLNLREYLKDAYVHPVFQKNDIYEFAGIDEEEKNPMVATKRQSRMNTPVDSKFNSSSGTNEGEFSRMAPT</aaseq>

Gene Sequence

<dnaseqindica>1..314#475..624#1403..1538#1677..1778#2011..2130#2255..2335#2496..2836#3751..4044#4156..4480#4622..4855#4961..5215#ATGGGTTCTCTCACAGATATCGGCGTCGCCGCAGGAATAAACATACTGTCCGCATTGGGTTTTCTTCTCGCATTTGCGGTTCTCAGGATACAGCCTATCAACGACAGGGTCTACTTTCCCAAATGGTACCTCAAAGGGACAAGAAGCAGCCCAAGAAGCATGGGAACGGTTTTCTCAAAGTTTGTCAATGCTGATCTCTCGACGTATATCCGCTTCCTGAATTGGATGCCTGCAGCGCTGCAAATGCCTGAGCCCGAGTTGATTGAGCACGCAGGCCTCGACTCCGCGGTATATGTCCGCATATATCTTCTTGGGTGAGCATGCTGTTCGTGCTTTGCAATTGGTCTTTTTTTTTTGTCTTTAAAGTTTCCGAAAAGGTTGAATTCAACTGATAAATGTGACTATATGATTTGGATTGGATGTCAGAACATATTCGGTGTATTATGCTTACTGCATAGTTCTCTTGCTATGCAGGTTAAAAATATTTGTGCCGATTGCTGTGCTGGCATTCATTGTCCTTGTTCCTATCAACTGGGCTAGTGGAACTTTGGAGAAGGAAAAGAGTCTAAGTTATGATCAAATTGACAAGCTTTCAATATCTAACCTTGGAAAAGGATCGAAAAGGTATAATTCTCTGTGCTTCATGTGTGTGTCCTAATGCTTGCCGCACCACCATGGATCGTGCCTTTGTTTCTTTGAATAATTACCTGTGTCGCGTATAATGTTACCGCTAGTCTTTACTTCTCATTCACGGTATAATGCATACCATCATATCCTTCGAACAAGATAATGACATTGAAGGTTTCCTTTCCTATCTGTACTTTGAAAAATTGGCGGTCAGACATTTTGGAATTTTGTGAATATGTTTGAAGTTTTTCAATATCGGTGCACTATTAGATACTTTCAATAAATTTAGTACAAAAATATTTATGCAGTGATAACCTATGCTTAACCTAAAATTGTAACAATTAATGGAGACTGGTGTGACTAATAATCCAAACTGGACCTCTTCGAAATTGATGCATGTTCTAACTTTTTCACATAAATCTGCTCTATTAATACAGAAGTGGCAAACCTTCTGCCCTTTCTTCAAAAAGAAAAAAAAGCTTTTCACATAAATGAATGCAAAGGCTTTGCCTCCAAATAATTTCCCAATTATCGATGATTATTCTAGCGTTTAGTCATCATCACTTTTATCAAATCAGTATTTATGATGCTCTAGCACTAGAATTTGATCAGGCTCTTGCGGTATTTTTCTAACCAACACAAATGCCTAGTAATTAGTTTTTTTTTTCGTTGTCAATTTCACTAGTGAGAGTTTAGCCGAATTTATATCTTGTGTTCGATATCCTGATAGGCTGATAATTTCTCTAATGAATTTATGTTTTTTCCCTGTCAATAGATTTTGGGCACACATAGTGATGGCCTATGTATTTACGTTTTGGACGTTTTTCGTGTTGTATCGTGAATACAAGGTTGTAACAACTATGAGATTGCGCTTTCTTGCTATTCAGAATCGTCGAGCTGATCAGTTTACGGTGAGAGATCTTTCCCGTAACACTCAGATCAGCGAATTTAAACTTCTTTACTAGATTATTTCAACTTTGCAACTTATTATATAGTTATGCTTCTTTTTTTTTGAATTTACGGCGGTGAAAAATTTCTTATTTATCTAGGTCCTGGTGAGAAATGTACCACCTGACCCAGATGAAACAGTTAGTGAGCATGTTGAGCACTTCTTTGCTGTCAATCATCGTGATCATTATCTCAGTCACCAGGTAATAAATTTTGCTATCTTCAATCCGCTGTGGACTTCAGCATTGCTTTTTGTGGAAAAACTAGATAATTAAGTTGTAAGGAAATCCAAATAAGAAACGACTCATTGTATTTCCTTTTGTTCTGTTCTCCTGAATTACCGACAGTTCTTTACTCTTAGCACATAACAAATAGTCCAGCTCAAATGTGTGCTTCTCATTTGGAGTAATTTCTTTTTTATCATATGACCAACAGACCGTATACAATGCAAACACCCTTGCCGGTTTGGTTGAGCAGAAGAAAGGCTTGCAAAACTGGCTGGTCTACTACGAAAACCAGCATGCTAAAAACCCTGCAAAAAAACCAACTATGAAGGTACGGGTTGTCTGTTGCAGATTTATTCTCATGGACCCAAAGCTTTTTAATCATCTAGTATGAAGTTATTGTTTTAGTTTCTGCTAATCTTGCAAGTGGCATGAATCAACTACATTTCTTGTAGACAGGATTGTGGGGCCTTTGGGGGAAAAGAGTGGATGCTATAGAACACTACACCACTGCCATTGAGGAGTTATGCAAACAGGTGCAAGTTTCAGTAATTCATTGGAAGCATTTTCATGCTTTCACCATGTTGACACTTGACAGTGTTACCAGACTACTTGACCACCAATTTTCCTTCGATAAACATATATTTACCCTGTAACAATCAAAATACCAAACGAAATTGCACACTTGCATTGCAGGAAGATGAGGAGAGACACAAGGTGATCACTGATCCTAATGCTATTATGCCAGCTGCATTTGTATCTTTCAAAAGCCGGTGGGGAGCTGCTGTTTGCGCTCAAACGCAACAGACGAGCAATCCAACGTTGTGGCTTACCGAGTGGGCCCCAGAACCTCGGGATGTTTTCTGGCCTAATCTCGCGATCCCTTTCGTCGAGCTCTCAGTCCGGAGGCTTATCATGGCCGTTGCACTCTTCTTTCTGACCTTTTTCTTCATGATTCCAATTGCAATTGTCCAATCAATGGCAAACTTGGATGACATTGAACGGATGCTTCCTTTCCTGAAACCTATAATAGAAAGGTGACTGTTATTACCCATTGTTTTTGCAGTTTAATTTCCATAAAAAATGCATTTGCAGCATGTTGTTGATCAGTGCATCTACATATTTTTTGCCTTCCTATCATGAAAACAGTTAGATAGGTCCAAATTTTGACTAGTAATGATACTGGTATGATGGTACCATACTGAAATAACATCCAATTTCATATAAATAAATGCATATGCATTTCAAACTGGATGTATGATTGGAAGATTTTGCAATTCATTATGTTACATTGTTGACATAATTTCTGGGTAAACATTTGTTTAGCACGCTGTTGAGTACTTATTTCTTTAAGTCACTCTTTCTTGCTAACTAGGATATAATATAAAGCAACAGGAATCGAACCACTCATATAATAAACTGTAATAAAGTAGACTTTTGGATTTGTTGAACATGCTGTAGCCTGTAGGAGTGAACAGTTACCTTCTACATTTCTTTATCATTGAACAAGGAGTAATGTCTGAATGTTGGAATTGAGTACAACCATTAAAATGTTTCATTTTGCTGTCTTCAACCTTTTGATAAACCCATAAAAGTGTGTTGCTGCTGGGTGTGTGACTCCTGGAGTTAGCACTCTGCTATGCTTGGACGTGTTCAGTTCTGGATGTTCATTTGCATTCCTTTGAATCTGAAAATTTATAGGGCTACCAAATTTAGATAATGACAGGTCAAACGTGTATATCATAACAGAAATAATGCTCCACAAGTGCATAGATGCATGACTTGGGTTCATGTTTAAACACTTCAAAATTTCCCTGGCTGGATAAAAAAGTGAGTAAAGAAAAGAAAAATAAATTTAACAAACCCCACATTTGTCACATTACTGTTGTTTACTGTTTGTCACATAGTGTTTTTCTGGATCTAAAATCATTTCTGATGCAATGTACTGCAGAAATTCACTGAAGTCAATTGTGCAAGGTTTCTTGCCAGGAATCGCATTGAAAATCTTCCTTATACTTCTCCCAACATTTCTTGTGATGATGAGCAAAATTGAAGGTCATACATCACTATCTGGATTGGACAGGAGGACTGCGTCGAAGTATTATTTGTTCCTATTTGTCAATGTGTTCTTGGGGAGTGTAATAACTGGAACAGCGTTCCAACAACTCAACAATTTTATCCATCAGTCAGCTAATAAGTATGCTCAATCTGTCATTGCTTCTTTGTTATGGATGTGGGTTAGGGGGTGTGTTTCCCTGACCCCCTGACCCACATTGGTTAAGTTGGTTAATGTTTACCAGCTAGCCAATAATACTAATACCTTACCTTGACACCTTTTGCCTTTTGTTTTCACAAGAATTCCAGAGATTGTCGGAGAATCCATCCCCATGAAAGCAACATTTTTCATCACATATGTAATGGTTGATGGCTGGGCTGGTGTTGCCGCTGAGGTTCTTAGGTTGAAGCCATTGGTCATGTTCCATATAAAGAATACTTTCTTGGTCAGAACCGAGCGAGATCGAGAGCAGGCCATGGACCCTGGGAGCCTGGATTTTGGCACCACAGAACCAAGGATACAACTGTACTTTCTGCTTGGGCTTGTATATGCTGTCGTGACACCAATTCTTCTACCTTTCATCATAGTGTTCTTTAGCCTTGCCTATCTAGTATTCAGACACCAGGTACTAGTCTGCCTTCAAGTTTAAATATACCCTTTTATCATATTGCCACATTCACAATGGCAGAAGCATACGTTTCCGGTCATTCTTCAATCTTCTCTTAGCACGGTCTGCTAATCTTTTTTTCTGCTTCTTTTTTGCAAGATCATTAATGTCTACAATCAGCAATATGAGAGTGGCGCGCAATTCTGGCCAGATGTCCAAAGACGACTGGTTATAGCATTGATAGTATCACAAATCCTCCTGTTGGGACTGCTGAGCACGCAGGAAGCAGAGAAATCCACTGTTGCTCTTCTTCCTCTTCCTGTACTGTCCATATGGTTCCACTATGTTTGCAAGGGCCGCTTTGAGCCAGCGTTTATAAAGTTCCCCCTGCAGGTTAGACTGAAACTTTACTCTTCACACATGCATTCACCATAGCATATAGTAAAATTAAAAACTAAGCTAGAACAATCCTGATACATAAACATTTTGGTCTTGTAGGATGCAATGGTAAAGGATACACTGGAACGGGCAAATGACCCAACCCTGAATTTGAGAGAGTACCTGAAGGATGCATATGTGCACCCAGTGTTCCAAAAAAATGACATATATGAGTTTGCTGGCATCGACGAGGAAGAGAAGAACCCCATGGTTGCAACGAAGCGCCAATCGCGAATGAACACACCAGTAGATAGCAAGTTCAATTCCAGTTCTGGCACTAATGAAGGAGAGTTCAGTCGGATGGCTCCTACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019816

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA019816&oldid=48572"