BGIOSGA019825

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Revision as of 02:58, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019825| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019825, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA019825

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019825, complete gene.

LocusTag

OSJNBB0092G21.14

Ensembl Transcript ID

BGIOSGA019825-TA

Ensembl Protein ID

BGIOSGA019825-PA

Length

3891

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20578695..20582585

Sequence Coding Region

20578695..20578776,20578885..20578995,20579109..20579191,20579283..20579376,20579463..20579792
,20580015..20580294,20580396..20580557,20580735..20580950,20581059..20581096
,20581198..20581361,20581434..20581547,20581643..20581684,20581806..20582585

Genome Context

<gbrowseImage1> name=IndicaChromosome05:20578695..20582585 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:20578695..20582585 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAGCAGATCCGGCCCCATCCTCGACGCCGCCGCCCTCCTCCCCGGCGCCCGCGGCTTCTCCGTCCCGGCATCCTCCAGGTGAGGAAGGAGGAGGGGCTGAGCGCGTGGAGGTGGAGTACGTGGATCCCCCGAGCCCAGATTGCTGCGGCGGAGCCGACCCGGACCATGCGCCGCCGCCGTCGCCGAAAGGTGAGGAGCCGGTGGTGAGCGCTGAGGAGGAGCAGGCGGCGGTTGCAGGAGGTGAAGGGGAGGCTCTTCGCAGCTTCTTGGAGGAATTTGGAGACCAAGGGGATGATTCCCTTATCCCGTCACCGAAGCTGAAGCAGATAAACACCCCTGACCGCCTCGCTGCTCTTCGTTTTCTTGGGGGAAAGTATAACAGCTTGTTAGAGAGGTACAAGCAGCAGGTGGCTAAGTGTGCCGAGGAGTGTGCGCCGAGGTACGATGGCTTGAAGAAGAAGTATGCAGATGAGTGTGCAGAACGGCGACGATTATACAATGAGCTCATTGAACTGAGGGGTAACATCAGGGTTTTTTGTCGATGCCGCCCTCTAAGCACTGCTGAGATCTCCAATGGGTGTTCATCTATAGTTCAGATCGATCCATCCCATGAGACTGAGCTGCAGTTTGTTCCATCTGATAAAGACAGGAAGGCTTTTAAGTTTGATCATGTTTTTGGACCATCTGACAATCAAGAGACTGTCTTTGCTGAAAGCTTGCCTGTTGTGCGGTCTGTCATGGACGGTTTCAACGTATGCATCTTTGCATATGGACAAACTGGAACTGGGAAAACCTTCACCATGGAAGGGATTCCAGAGGATAGGGGTGTTAACTACAGAGCATTGGAAGAATTATTCAGGTTGTCTGAAGAAAGAAGCTCTTCTGTTGCCTACACATTTGCTGTGAGCATTTTGGAAGTCTATAATGAAAAAATCAGGGATCTTCTAGATGAAAGCTCTGAGCAAACAGGAAGAAAATTGGACATAAAGCAAACTGCTGATGGAACACAAGAGGTGGCTGGTTTGATTGAAGCTCCAATTTATACTATAGATGGTGTTTGGGAGAAACTGAAAGTTGGAGCTAAAAATAGATCGGTTGGAGCAACTAGTGCCAATGAACTAAGCAGCCGCTCTCATAGCTTGGTTAAGGTTACCGTCAGGAGTGAGCATCTTGTGACAGAGCAAAAGTGGAGGAGCCATATCTGGTTGGTCGACCTAGCTGGAAGTGAGCGTGTGAATAAAACAGAAGTAGAAGGGGACAGGCTAAAGGAGTCACAGTTCATAAACAAGTCGCTCTCTGCTTTGGGCGATGTTATTTCTGCCCTTGCCTCAAAAAATGCACACATTCCTTATAGAAATTCCAAGTTGACTCATCTGCTCCAAAGCTCTTTAGGTGGGGATTGCAAGACACTCATGTTCGTGCAGATAAGTCCAAGTTCTGCAGACTCGGGAGAGACTCTCTGCTCACTTAACTTTGCTAGTAGAGTTAGAGCTATAGATCATGGCCCTGCTCGTAAACAAGCAGATCCAGCTGAAACTTTTAAGCTCAAGCAGATGACAGAGAAAATTCGTCATGAGGAGAAGGAAAATGCAAAGTTACTTGAAAGCTTGCAACTGACGCAGCTTAAGTATGCTTCTCGAGAGAATGTCATCAAGACACTTCAAGAGAAGATAAGGGAGGCTGAACAAACGTCCAAAACTTATCAGCAGCGGCCAATGAGAAGAAGGCTGCCAGGGATACAGCTAGATCAAGCAAAGCCACCACTTGCTCCTATGAGGCAGAGACCACCTCTTGGAAGAATTGGCAATCACATTCCACCTAAGGCTCCTCTTAAACTGAGGCTCAGTAAAGCACCCACAATTCAAAATAAAGAGAACATTCCTGTCATGATGAACAAAGGATCCTCTGGGGCTGATACCAGCAAGGCTGTTGCTGGCAAGGCACGGCGAGTTTCTCTGACTCCTGTGATTCGACACATACCTCTGCAGCCCAAGAGGCGATCCTCACTCGCGGTACTACCAACCCAGAGAGAACAGCTGTCCATATTTCCTGATAAGAGATCAGTGTCCCGTCTGTCCCATATTCAGATGCCAAGGAGATCAATTGCAACATTTAATTCAATTCCAGCAACACCATTAGCAGCTGCTGCACATAAACAGGTTGATGGCACCCCAGAAGCACGGCAATTGAGGAGAATCGAGTTCAGCAGTTGCAAGTTCAGAAGCCCTCCAGCGCTGGCCAGGTTCAACTCAAGGAATAACGCCTTGTCACCTCAGCAGAAGCTGCGGCTAGCATCTGGCTCAGGAAATGCCAGCAAAATATGCTTCAGTGTTCAGAAGAGAGTGATCCTAGGTTCACCTGCTCCAGTGAAAAGCAGTCTGCTCTCTGGTACTGGCATCTTCAATCCAGCTCTGCGCGAGAAAATGATGGCGGCGAAAATAGGGAATGCGCAGCGCGTGTTCAACACCAACAGGAGGAAGTCTGTCCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MEADPAPSSTPPPSSPAPAASPSRHPPGEEGGGAERVEVEYVDPPSPDCCGGADPDHAPPPSPKGEEPVVSAEEEQAAVAGGEGEALRSFLEEFGDQGDDSLIPSPKLKQINTPDRLAALRFLGGKYNSLLERYKQQVAKCAEECAPRYDGLKKKYADECAERRRLYNELIELRGNIRVFCRCRPLSTAEISNGCSSIVQIDPSHETELQFVPSDKDRKAFKFDHVFGPSDNQETVFAESLPVVRSVMDGFNVCIFAYGQTGTGKTFTMEGIPEDRGVNYRALEELFRLSEERSSSVAYTFAVSILEVYNEKIRDLLDESSEQTGRKLDIKQTADGTQEVAGLIEAPIYTIDGVWEKLKVGAKNRSVGATSANELSSRSHSLVKVTVRSEHLVTEQKWRSHIWLVDLAGSERVNKTEVEGDRLKESQFINKSLSALGDVISALASKNAHIPYRNSKLTHLLQSSLGGDCKTLMFVQISPSSADSGETLCSLNFASRVRAIDHGPARKQADPAETFKLKQMTEKIRHEEKENAKLLESLQLTQLKYASRENVIKTLQEKIREAEQTSKTYQQRPMRRRLPGIQLDQAKPPLAPMRQRPPLGRIGNHIPPKAPLKLRLSKAPTIQNKENIPVMMNKGSSGADTSKAVAGKARRVSLTPVIRHIPLQPKRRSSLAVLPTQREQLSIFPDKRSVSRLSHIQMPRRSIATFNSIPATPLAAAAHKQVDGTPEARQLRRIEFSSCKFRSPPALARFNSRNNALSPQQKLRLASGSGNASKICFSVQKRVILGSPAPVKSSLLSGTGIFNPALREKMMAAKIGNAQRVFNTNRRKSVL</aaseq>

Gene Sequence

<dnaseqindica>1..82#191..301#415..497#589..682#769..1098#1321..1600#1702..1863#2041..2256#2365..2402#2504..2667#2740..2853#2949..2990#3112..3891#ATGGAAGCAGATCCGGCCCCATCCTCGACGCCGCCGCCCTCCTCCCCGGCGCCCGCGGCTTCTCCGTCCCGGCATCCTCCAGGTACGCGCGTGCTTCGTGGTTCCGTGAGGGGCGGGTGGAGGAATGGGTGGGCTAGGGTTTTTTGTGGGTTCGTGTCTCAAGGTGTGTCCTGACTCTTTTTTTTGGCAGGTGAGGAAGGAGGAGGGGCTGAGCGCGTGGAGGTGGAGTACGTGGATCCCCCGAGCCCAGATTGCTGCGGCGGAGCCGACCCGGACCATGCGCCGCCGCCGTCGCCGAAAGGTTGGGTGCCTTGTCCTGTAGCGTATAAGCGATTATTAGGGCTTAATTTTTGTTTGTCTCATGGTGCGGCGAGGGCTTGTTTTGTATTCTGTCTCATGGTGGCAAAATGTCAGGTGAGGAGCCGGTGGTGAGCGCTGAGGAGGAGCAGGCGGCGGTTGCAGGAGGTGAAGGGGAGGCTCTTCGCAGCTTCTTGGAGGTGGGAAATTTTGGTGTTCTTGCTCAAAGATCTGTTAGGTTTTCTGTACTCCGTGCTTTGTTTCTGATTTGTAGGGTTCTATTTCTTGCAGGAATTTGGAGACCAAGGGGATGATTCCCTTATCCCGTCACCGAAGCTGAAGCAGATAAACACCCCTGACCGCCTCGCTGCTCTTCGTTTTCTTGGTACACCTTGCACAATGAAATATACTTTTTACCTTGCTCATGGAGGTTATCTGCATCTAGAGTCATGATTGGTATGTGTGTTGTAGGGGGAAAGTATAACAGCTTGTTAGAGAGGTACAAGCAGCAGGTGGCTAAGTGTGCCGAGGAGTGTGCGCCGAGGTACGATGGCTTGAAGAAGAAGTATGCAGATGAGTGTGCAGAACGGCGACGATTATACAATGAGCTCATTGAACTGAGGGGTAACATCAGGGTTTTTTGTCGATGCCGCCCTCTAAGCACTGCTGAGATCTCCAATGGGTGTTCATCTATAGTTCAGATCGATCCATCCCATGAGACTGAGCTGCAGTTTGTTCCATCTGATAAAGACAGGAAGGCTTTTAAGTTTGATCATGTTTTTGGACCATCTGACAATCAAGGTATGATAATTTGCTTTTCTTTGTACAGTCCATTTACATATTCTGTGGGAAGATACAAAAAACATCGTGTCAAATACTATAATTATACTGCAATCATAGTTTGGTTGAACAGAAGACATTTTCTCTGTTTCTTACGGCACATCTTGGGACATGATTATATGTTGAAAGATATGAATCATATTCTGTTTCTTTAATGCACTATGATCAATGTTTTTCTTTCAGAGACTGTCTTTGCTGAAAGCTTGCCTGTTGTGCGGTCTGTCATGGACGGTTTCAACGTATGCATCTTTGCATATGGACAAACTGGAACTGGGAAAACCTTCACCATGGAAGGGATTCCAGAGGATAGGGGTGTTAACTACAGAGCATTGGAAGAATTATTCAGGTTGTCTGAAGAAAGAAGCTCTTCTGTTGCCTACACATTTGCTGTGAGCATTTTGGAAGTCTATAATGAAAAAATCAGGGATCTTCTAGATGAAAGCTCTGAGCAAACAGGAAGAAAGTATATTTCCTTTGTCCCATTTATTTGATAGTATCCATTTAATACTGATTTGTAATTAATCTATTCAATTTTAACACACAATATCCTTGTTCTATGCAAAGATTGGACATAAAGCAAACTGCTGATGGAACACAAGAGGTGGCTGGTTTGATTGAAGCTCCAATTTATACTATAGATGGTGTTTGGGAGAAACTGAAAGTTGGAGCTAAAAATAGATCGGTTGGAGCAACTAGTGCCAATGAACTAAGCAGCCGCTCTCATAGGTGAGGCTTTTTGTGTTTCATTGACAGTATCCCTTTAAAGTAATTTAACTTATATATTAGAATTTGCTGCTATTTTTCAATGTTGATAATAGATCATCCTCAATTAAAAGTGTGCTTCTACAACGTTATTGTAATGATAATTTGATGATGGTATTTGTGGTTCTGTTCTATATGCAGCTTGGTTAAGGTTACCGTCAGGAGTGAGCATCTTGTGACAGAGCAAAAGTGGAGGAGCCATATCTGGTTGGTCGACCTAGCTGGAAGTGAGCGTGTGAATAAAACAGAAGTAGAAGGGGACAGGCTAAAGGAGTCACAGTTCATAAACAAGTCGCTCTCTGCTTTGGGCGATGTTATTTCTGCCCTTGCCTCAAAAAATGCACACATTCCTTATAGGTCAGTAATATTTAATATCTATAGAATTAAACATCTGTATTGTCCAGCTACTTCAAGAACTATAGCTTCATCTCAGTCTCACCACTGTTTACCTTTTTCTGTCAATAGAAATTCCAAGTTGACTCATCTGCTCCAAAGCTCTTTAGGTAAGTTCAATTTTTCTGGTACCAATTGTTCTTAAAAATTCTTTTATTGAATTAGCAAATTAGCAAGTAGATAGATTACTCATGATGGTTGGCTTGTACAGGTGGGGATTGCAAGACACTCATGTTCGTGCAGATAAGTCCAAGTTCTGCAGACTCGGGAGAGACTCTCTGCTCACTTAACTTTGCTAGTAGAGTTAGAGCTATAGATCATGGCCCTGCTCGTAAACAAGCAGATCCAGCTGAAACTTTTAAGCTCAAGCAGATGGTAATTTGATTCTTTCAATACTAAAAAATTATGATGCAACTTAACTGATACTAACTGGAAACATCATTTCAGACAGAGAAAATTCGTCATGAGGAGAAGGAAAATGCAAAGTTACTTGAAAGCTTGCAACTGACGCAGCTTAAGTATGCTTCTCGAGAGAATGTCATCAAGACACTTCAAGAGAAGGTATGTTGGCTAGATTCATTGTTATTCTCTTGGATGGCCTTGCATATCTTATGAAACAAAATGCTGGCAAATAACCCGACGAATATTGTGAACAGATAAGGGAGGCTGAACAAACGTCCAAAACTTATCAGCAGCGGGTAAGTAGGATAACCACTTCTGTTTAATTCATCAGAGACCAGATTCTGCATGCATTTGAATATTCTTATCTGTGCGTGACATTTTCTTTTGTACAGGTTAGAGAGCTAGAAAATGAATTAGCCAATGAGAAGAAGGCTGCCAGGGATACAGCTAGATCAAGCAAAGCCACCACTTGCTCCTATGAGGCAGAGACCACCTCTTGGAAGAATTGGCAATCACATTCCACCTAAGGCTCCTCTTAAACTGAGGCTCAGTAAAGCACCCACAATTCAAAATAAAGAGAACATTCCTGTCATGATGAACAAAGGATCCTCTGGGGCTGATACCAGCAAGGCTGTTGCTGGCAAGGCACGGCGAGTTTCTCTGACTCCTGTGATTCGACACATACCTCTGCAGCCCAAGAGGCGATCCTCACTCGCGGTACTACCAACCCAGAGAGAACAGCTGTCCATATTTCCTGATAAGAGATCAGTGTCCCGTCTGTCCCATATTCAGATGCCAAGGAGATCAATTGCAACATTTAATTCAATTCCAGCAACACCATTAGCAGCTGCTGCACATAAACAGGTTGATGGCACCCCAGAAGCACGGCAATTGAGGAGAATCGAGTTCAGCAGTTGCAAGTTCAGAAGCCCTCCAGCGCTGGCCAGGTTCAACTCAAGGAATAACGCCTTGTCACCTCAGCAGAAGCTGCGGCTAGCATCTGGCTCAGGAAATGCCAGCAAAATATGCTTCAGTGTTCAGAAGAGAGTGATCCTAGGTTCACCTGCTCCAGTGAAAAGCAGTCTGCTCTCTGGTACTGGCATCTTCAATCCAGCTCTGCGCGAGAAAATGATGGCGGCGAAAATAGGGAATGCGCAGCGCGTGTTCAACACCAACAGGAGGAAGTCTGTCCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019825

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA019825&oldid=48581"