BGIOSGA019828

From RiceWiki
Revision as of 02:58, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019828| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019828, complete gene.| tag = OsI_198...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019828

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019828, complete gene.

LocusTag

OsI_19879

Ensembl Transcript ID

BGIOSGA019828-TA

Ensembl Protein ID

BGIOSGA019828-PA

Length

2865

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20633591..20636455

Sequence Coding Region

20633591..20633741,20633828..20633849,20634332..20634458,20635368..20635458,20635576..20635665
,20635766..20635866,20636315..20636455

Genome Context

<gbrowseImage1> name=IndicaChromosome05:20633591..20636455 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:20633591..20636455 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGCCCGCAGTGCTGCGCGAACCCGCCGACGCTGAACCCCGCCGGCGGGGAGGGGAAGGTCGTGGACAGCTTCGGCGGGATCAAGGCGTACGTCTCCGGCGCCGCCGAGTCCAAGGCCGCCGTCGTCCTCGTCTCCGACGTCTTCGGGTTTGAAGCGCCGAACCTGAGGAAGATAGCCGACAAAGTTGCCTCGTCTGGCTACTTCGTTGTGGTGCCAGATTTCTTACACGGGGATCCTTTTGTACGTGAAAATACTGAGAGACCGATAGAAGTGTGGATAAAAGACCATGGCGCGGATAAAGGGTTTGAAGAAGCAAAACCAGTTATTGCTGCTCTAAAGGAGAAAGGAGTATCTAGTGTTGGGGCTGCAGGTTATTGCTGGGGTGCAAAGGTGGTGGTAGAGTTAGCAAAAGCTCATGAGATCCATGCTGCTGTGATGTGTCACCCCTCTCTTGTTACTGTTGATGATATGAAAGAGGTCAAATGCCCAATTGCTATACTTGGAGCTGAAATTGACCATGTGTCCCCACCAGAAGTAGTAAAACAGTTTGAGCAGGTTCTTTCTTCTAAGTCAGAGATTGGTCACTTTGTCAAGATCTTCCCTGGGGTCGAGCATGGATGGACCGTAAGATACAAGGATGACGATGCCGCTGCTGTCAAGAGCGCCGAGGAAGCCCTGGCAGACATGATCGACTGGTTTAATAAGAACCTCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MASPQCCANPPTLNPAGGEGKVVDSFGGIKAYVSGAAESKAAVVLVSDVFGFEAPNLRKIADKVASSGYFVVVPDFLHGDPFVRENTERPIEVWIKDHGADKGFEEAKPVIAALKEKGVSSVGAAGYCWGAKVVVELAKAHEIHAAVMCHPSLVTVDDMKEVKCPIAILGAEIDHVSPPEVVKQFEQVLSSKSEIGHFVKIFPGVEHGWTVRYKDDDAAAVKSAEEALADMIDWFNKNLK</aaseq>

Gene Sequence

<dnaseqindica>1..151#238..259#742..868#1778..1868#1986..2075#2176..2276#2725..2865#ATGGCGAGCCCGCAGTGCTGCGCGAACCCGCCGACGCTGAACCCCGCCGGCGGGGAGGGGAAGGTCGTGGACAGCTTCGGCGGGATCAAGGCGTACGTCTCCGGCGCCGCCGAGTCCAAGGCCGCCGTCGTCCTCGTCTCCGACGTCTTCGGTGATTGATCTCCCCTCTCTTTGTTATGTTCCTGCTTAATTAGTTTCTTTTAGTGACGAAAAGTAACGGGTCTTCTCATCGTGCAGGGTTTGAAGCGCCGAACCTGAGGTACAGATTTATCTGTTTGCTACTACTTATTTCGGTTTCACTTGTAGTACAGGATCATGCAGGATATGCCATCGTTGGTCTGTTCCTACTCCTAGTATGTTTTTGGGGAAATGGGTTACTGGGATGTCTTCCGCGCACTGATGGCCATATCGTGCTGGGATTAATTTTTGAAAACTTAATTGCAATTTTCCTGATGACATGTGTCATTTTGAACATTTTGAAGTAAATCTAGCTTGTCGTAAGTACCTGTCATCCGTGACGTACACTATGGAACCTGATGGGATGGCATATCTCATGAAGGAACATAGTAGCTGACAAAGTTTGCTGATTTTGGCATGATTATTATTTTTTTAAAAAATTCTACTCGAATTTTCATGATGGCATGTGACCTCGTTGAAGTGCTCCAGCTTATCGTAAGTACTAACTGTCAGCTGCCTATAACTTGTACTCTGGAACCTGATGTAATTTCTTAATTCGTGAAGGAAGATAGCCGACAAAGTTGCCTCGTCTGGCTACTTCGTTGTGGTGCCAGATTTCTTACACGGGGATCCTTTTGTACGTGAAAATACTGAGAGACCGATAGAAGTGTGGATAAAAGACCATGGCGCGGTTTGTTATTAATTCTCTCCTTAAATTATGTTCCACTTGTTTCTTTTTCTAATGTTAGGAAATGATTCAGATTGCCTTGTTTCAAATTTTCTTGATGCTATATGTTTTCATATTTTGGATTGCCATCTTGTGGATGCTAGTGATTTCTTACTAGCATATACTGTGGTAATTTCTTGAAATTTTCTTAATTTAACTAGGCGTACATAAGAGTACCATTTCATTTTGTGTATATAAGATCTGCCATTCCAATACAACAGCTATGAGCCTATATAATGCTTAGCTATACATCTTTCTGACTTCTAAGCATCTCTTAATTATTAAGAGAGGGCGAAAATAAGCCATAAAGTTTTCTCTAGAGGCCTAGTAATTATCACGTAATCAGAGAAGAAGAGGAAGATATGCACCGTGTAATCGACTGATCGTGATGGCAGATTATAACGGTGTAGATTAATCAATATAGTTGTATATGAAATACGGTTATGTTTATGGAAGAGAAGCAATAGCAATAGTTGTATACTAAATCTAATTCTACTTTTAAAGTCTAGCTCTGTACGAAATTGCATAGGAAAATCTGCTAGTCTGTATGAAGTTATCTTCCCTTATGTTCAAAAGCTTGATTAGATATACCTTACTGACTGTTGGTTCCTTATTCCCTTCATAACTTAGGGATGCAAGGTGGTTGGCCCATGGGTACCCATTGACCTATTCTAGTCCATTTAGTTTGCAATTTTATACATGGTATGAACTAACAAATGAGTGGAAACTGGAAAGTACCTTTTGTTATATGGGACGGGTCAATGGTTAACCATGAGTGGCTAAATTTGCATCCCTAGCTTTGTTTGTCATCTTTCACAGCATTTCTCCTTCTATTGAAAATTTCACCAAACAATACATGTTTCCTTTTTACAGGATAAAGGGTTTGAAGAAGCAAAACCAGTTATTGCTGCTCTAAAGGAGAAAGGAGTATCTAGTGTTGGGGCTGCAGGTTATTGCTGGGGTGGTAAGTGCTGTGTTTTTTTTTTGTCTATTGTGTTTCTGTAATTCTGATCTAGAATTTGAAGGTTTAGCCTGCTAACCGCTGACTGTTGAGTGTCGTGTGACTTCTTCCATGTACCAGCAAAGGTGGTGGTAGAGTTAGCAAAAGCTCATGAGATCCATGCTGCTGTGATGTGTCACCCCTCTCTTGTTACTGTTGATGATATGAAAGGTTAGATCCCTTCATGAGAAATTTCTAGATGCACATACTTTTTTCTCTTGCAGAAGGTTTGATACTTACTCTGTCTGTGGCATGTGCTACCTAATTTCAGAGGTCAAATGCCCAATTGCTATACTTGGAGCTGAAATTGACCATGTGTCCCCACCAGAAGTAGTAAAACAGTTTGAGCAGGTTCTTTCTTCTAAGTCAGAGGTACGTTCTCATTCCACGAAAGATTATCTTCAAGAACCTAGTGCCAAACTGTCCCATTATAGTACATATTGATAGGCCATCCAATCATGCCTTTGGTTTTTTCCTTTTTTTTTTTGAAAGATCCAGCAATTGCGGCTTTGTATTACAAGTAAGAATACCTACACCTACTACAACAAGTATGCCTTTAGCTTTTGATATTGGAATACCCAGCCTCTTTTTGTGACTAAAAGCTATGTAGGCGTGATGCAATGAGAACATTATATTGCCTGTAACTGGCGAAAATTACTGTATGAAACAAGATGAAATACGCAGGAGAAATTAAGGAGAAGAAATCATGTAGTGCAGCAGTTTATATAGAGAAATCGGAGAAACACATTGGCGACAGGAAATTGCTGTAAAGCTCATATGGAGGTTTTTCATTCTGACATGAAATTTGCTGGGTACGCAGATTGGTCACTTTGTCAAGATCTTCCCTGGGGTCGAGCATGGATGGACCGTAAGATACAAGGATGACGATGCCGCTGCTGTCAAGAGCGCCGAGGAAGCCCTGGCAGACATGATCGACTGGTTTAATAAGAACCTCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019828

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA019828&oldid=48584"