BGIOSGA019830

From RiceWiki
Revision as of 02:58, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019830| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019830, complete gene.| tag = P0605G0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019830

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019830, complete gene.

LocusTag

P0605G01.11

Ensembl Transcript ID

BGIOSGA019830-TA

Ensembl Protein ID

BGIOSGA019830-PA

Length

2778

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20648282..20651059

Sequence Coding Region

20648282..20648432,20648521..20648542,20649131..20649254,20649940..20650030,20650159..20650248
,20650343..20650443,20650919..20651059

Genome Context

<gbrowseImage1> name=IndicaChromosome05:20648282..20651059 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:20648282..20651059 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAAGCTCGCACTGCTGGGAGAACCCGCCGGCGCTGGACCCGGCCGGCGGAGGGGGCGAGGTCGTCGGCGACTTCGGCGGGCAGAAGGCGTACGTCGCTGGCTCGGCCGGCTCCAAGGCCGCCGTCGTCCTCATCTCCGACGCCTTTGGCTTTGAAGCCCCAAACCTGAGGAAGATAGCAGACAAGGTTGCTTTGTTTGGTTACTTCGTTGTGGTGCCAGATTTCCTTCATGGGGACCCATACCAGCCAGACAATCCCAACAATCCTGGAATTTGGTTACAGTCACATAATCCGAAAGAGGCATTTGAAGAGGCAAAACCAGTTATTGCCGCTCTAAAGGAGAAGGGAGCATCTTTCATTGGGGCTGCAGGTTATTGTTGGGGTGCAAAGGTAGTGGTGGAGTTAGCAAAAGTCCATGAAATCCAGGCTGCTGTATTGCTACACCCTTCTTTACTTGCTGTCGATGACATCAAAGAAGTCAAATGCCCAATTTCTATACTTGGTGCTGAAATTGACAAGACGTCTCCACCAGAGCTGTTAAAGCAGTTTGAGCAGATCCTTTCTCCTAACCCCGAGATTGCTCACTTCGTCAAGATTTTCCCCGGCGTAGAGCATGGATGGGCTGTGAGATACAATCACGATGATGTAGCTGCCGTCAAGAGCGCTGAGGAAGCCCTGGAAGACATGATGGATTGGTTCAAGAAATACCTGAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MASSHCWENPPALDPAGGGGEVVGDFGGQKAYVAGSAGSKAAVVLISDAFGFEAPNLRKIADKVALFGYFVVVPDFLHGDPYQPDNPNNPGIWLQSHNPKEAFEEAKPVIAALKEKGASFIGAAGYCWGAKVVVELAKVHEIQAAVLLHPSLLAVDDIKEVKCPISILGAEIDKTSPPELLKQFEQILSPNPEIAHFVKIFPGVEHGWAVRYNHDDVAAVKSAEEALEDMMDWFKKYLK</aaseq>

Gene Sequence

<dnaseqindica>1..151#240..261#850..973#1659..1749#1878..1967#2062..2162#2638..2778#ATGGCAAGCTCGCACTGCTGGGAGAACCCGCCGGCGCTGGACCCGGCCGGCGGAGGGGGCGAGGTCGTCGGCGACTTCGGCGGGCAGAAGGCGTACGTCGCTGGCTCGGCCGGCTCCAAGGCCGCCGTCGTCCTCATCTCCGACGCCTTTGGTAACTTCCGATTCATCACGAGTTAAATTGAACATGCAAGGATCGACTAGGGATGTTGACTGCTGAAATACCATTTCCCTCTTTGCAGGCTTTGAAGCCCCAAACCTGAGGTAAGCTATGGAACCTACTTTGAACTTGCAGTTGCTTGCTGGTATTTCTAGTACGCGTAATGGATAGTGTAGAAGGCATTTCTAAGTGGACAAAACTGCATTTACATCAGTTATTCTGAATTTCCTCTTCCAAAACCTTGTTTCAGGATAAGGGGATCAGAATTACACAAGAATAGTGGATCTTCCTTTTGAAGTTTTCAATTCAGATTTGTCTACTATTGCATACATTCCTATTTGTTCAACTCATACTTGTTGAATTTGTGCATTTGTTGAATATATACTTAGCAAAATAATACAGTATAATGTTGAATTTCATGATGTAGCATAATCAGATTGGTATTGGAACTAGATTTTGCTTTTATGCTCTATTTGAAGTGCATCTGTTTGCTTCCTTAGCAAAAGTAACACAGTATGATGTTGAATCTCATGATGAAGGTTGAATTAGTCGAGCTCTATGTAGCAAAATCAGATGGGTACTGGAACTACGATTTTGCTTGTGTGCTCTATTTGATGTGCATCTGCTTGTTTCTAGCAATACCCATCATTTATAAACTGACACGAATTTAAATATTTCGATATTTCGTGAAGGAAGATAGCAGACAAGGTTGCTTTGTTTGGTTACTTCGTTGTGGTGCCAGATTTCCTTCATGGGGACCCATACCAGCCAGACAATCCCAACAATCCTGGAATTTGGTTACAGTCACATAATCCGGTTCGTTATCTCCTCAACTTTTACCTATCCTTGAGGTTTCATGCCTATCCTTAAGGTTTCAGGACAGTTTGTTTCTATTTTCTTCTTGAAAATATTTCTGTGGAAATGTTACCATTGTCTGTGGCACGATCGCACAATGCTCCTAGCCAAGCTTGTTTCAAGCAGTAAATAATTCATTCAACCCTGTCAGAATCACATACGGAGTATAAACCTTCTGGGCATGCCTCAAGAATGTCGTCAGTTTGAGTGAACATTTTGCTGATAACTGCACTAGATGACTCTCTGAACTTTCAGTTCTTCTGCATTTATACTTTTTGTAAATGTTCTGATCATTCAGGCACTCATAGAGCTGGTTGTTTTTTCTTTTCCTTGCTATAGCCTTCCAAGGCTATAGACTTGTAATTTTTTTTCTGCTCTATCAACACGAAATGTCATACTATCTTGTGCGTGTTGTTTATAAAAATAGTGTGTTAAAGATTCTTCTTTAATTTAACCATTGACTAGTCAGATAGCATATGATATCTGGTTTGGTCTTTTCAAGCAAAGTATTATGTAAATTTAGGACCTATATTGGCTCTCCACACCCTGAAAACTTTTTTTATCTATGTTGAAAAGTTTTATCAAGCAGAAAAAAAATATTTCTTTTAATCTTTTAGATAATGGAAGATAAATTTTATTTTAATAGAAAGAGGCATTTGAAGAGGCAAAACCAGTTATTGCCGCTCTAAAGGAGAAGGGAGCATCTTTCATTGGGGCTGCAGGTTATTGTTGGGGTGGTAAGTTCCATGTGTTTTACTTTTGAACTACAATTTGAAGGTTGTCTTTTTAGTAGTAATTCTTGTTTTTTGTTCTCAAAAAATTTCCCCTTAACATGTATAAATATCACCACTTTTCATATTTTCAGCAAAGGTAGTGGTGGAGTTAGCAAAAGTCCATGAAATCCAGGCTGCTGTATTGCTACACCCTTCTTTACTTGCTGTCGATGACATCAAAGGTTAAATTTGTATTGCTCGAGTTTCCACGTCCTAAATTTCATCTACTACAAGGGCTTCAAGCACTTAACCTCTGATATATTAACTAATGCTCAGAAGTCAAATGCCCAATTTCTATACTTGGTGCTGAAATTGACAAGACGTCTCCACCAGAGCTGTTAAAGCAGTTTGAGCAGATCCTTTCTCCTAACCCCGAGGTAAGTTGTCAACCTTTGGGTTGATCTTAAGCTAGAAAATTTACAGAAAGTAAGGAATGCTCAGATTCAGTTAATAGTTCACTACTGATCTAAATTTGCATATATGAAATCCTTGATGCCAAATTATGTGTCTCGACTGTTTGTTATGTGTTTTGATTATTTAACAACAATCAAGGTGGACTGCCTTATAAATCACATGATTATTAGTATTTCTATAATGGCAAATGTAATTTTACGATATAGGACACCCATATGGGGCACCATGGTGCCCGGGCACCAAGGTATGAAATACACAAATTCACTCCAAAATTTTAAAATATATGCAAACATAATATGTGTGCAAATCGACCAGGTCTTTTTCCTGCTTTTCAAATGTATTTCTAACTTAAGCCCTGCATGTTTGGATATCCACGTGAGCACTTCAGTTCAGATTAAAAATCTCGGAGAGCCTTGAGGTCTTCCATTTTCTCTACAGATTGCTCACTTCGTCAAGATTTTCCCCGGCGTAGAGCATGGATGGGCTGTGAGATACAATCACGATGATGTAGCTGCCGTCAAGAGCGCTGAGGAAGCCCTGGAAGACATGATGGATTGGTTCAAGAAATACCTGAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019830