BGIOSGA019860

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Revision as of 02:58, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019860| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019860, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA019860

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019860, complete gene.

LocusTag

OSJNBB0014K18.12

Ensembl Transcript ID

BGIOSGA019860-TA

Ensembl Protein ID

BGIOSGA019860-PA

Length

4783

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21227718..21232500

Sequence Coding Region

21227718..21227771,21228239..21228442,21228518..21228772,21228851..21229066,21229667..21229822
,21229936..21230095,21230845..21230996,21231112..21231199,21231611..21231684
,21231770..21231844,21232222..21232500

Genome Context

<gbrowseImage1> name=IndicaChromosome05:21227718..21232500 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:21227718..21232500 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGGCGCCGCCGCGGGTATCCTGCGGCTCCCTTCTCCAGGAACTTCAGGTACTCTGGGGACAAATTGGCCAGAATGAAGCAGAAAGAGACAGGATGATATTGCAGCTAGAGGAGGATTGCCTCAATGTTTACAGAAAGAAAGTAGAGCAAACAAGAAAGCAAAAGGAGGACCTGATTGAAGAACTTTCTTTTGGTGAATTGGATATTGAGAAAATCCTTTCTGTTCTTGGAGAGCGAGAATCTTTTTCTAGGGTAGAGAAACTTGGGGGTACATTACTGGAACAACTTGCGAAAGTAGAGCCTGTTCTGGAAGATTTGAGACGGAGGAGGGATGAGCGAGTCGAGGAGTTTATGGTTGTACAGGCGCAGATAGTTCGGTTACATGCAGAAATTTCAGGAACAATTGAAAATGGGGATCCTGTACCTCCTTTGGTGGATGAGACAAACCTATCCTTAAGGAGGCTAGCAGAGTTTAAGAGCCAGCTTAAGGAGCTCCAAACTGAAAAGAATCTCAGGCTGCAAAAGATTGATGTACAGATCAATTGTATCCATGAAATCTGCAACATGATGTCTCTTGATCTCAAGAAAGAACTTTATGATGTTCATCCCAGCTTCGTTGAGTTGGGAAGGACCACATCGATGAGTATAAGCGACAGCACACTTGAAAGGCTTGCAGGAAAAGTTCATTCGTTAAATCAAGAAAAGAAACAGAGGCTTCGGAAGTTGCAAGATCTTGGCAGCACACTTATTGAGTTATGGAACCTAATGGACACACCAACTGCTGAACAGAAATGCTTTGACCATGTTACTTCTTTGATTTCAGTCTCACCAAACACAAAAATGCCCCAAGGATGCCTTGCACGTGAACTTATTGAGAAGGTAGATGTTGAGGTTAAGAGGCTGAATTGTTTGAAAGCCAGCAAAATGAAAGAGCTTGTATTAAAGAAAATGATTGAGCTTGAAGAGATCTACAAAAGTGTTCACATGGATATTGACAGTGATTACGAGGGGAGAATTCTCAATGATCTTATTGATTCTGGTAAAGCAGATCTCTCAGATTTGCTTACAGGAATGGATGGTCGAATTACAAAGGCAAGAGAGCACGCTCTAAGCAGAAAGGAAATTCTAGAGAAGGTTGAAAAATGGACATTAGCATCTGAAGAGGAGAGTTGGCTTGATGAATATGAAAGGGATCAGAATCGCTATAATGCTGGTCGAGGAGCTCACAAAAATCTCAAGCGCGCTGAAAAAGCAAGGATGCTGGTTAGCAAAATTCCATCTCTGCTGGAGAATTTAACTGCTAAAATTAAAGCTTGGGAAAAGGAGAACGGTGTCCCATTTATGTATGATAAGATAAGGCTGTTGGATAGTTTAGAAGAATACACCTCAAGAAGACAGCAGAAAGATGAGGAGAAACGGCGATCGCGGGAGCTCAAGAAACTGCAAGAACAGTATGCAGCAGAACAAGGTGCTACGTTTGGAACGAAGCCAAGCCCTGCGCGTCCACCTTCGGCTAGGAAGCCTCTTGGGCAGAGCTCGAACGCCAACATAATCAGTGGAACTCCTACCAGCCGCCGTGTCTGTACCCCGATGGCACGCAAGGGAGGCTTGTCTTCTGGAAAAGTGAAAGAGGCTGGCAAGACAGCCTTTATACCGGCAAACTATGTGGCCCTTCCCAAGGATTGCTCAGACAATTCTAACCTGTGA</cdnaseq>

Protein Sequence

<aaseq>MATAPPRVSCGSLLQELQVLWGQIGQNEAERDRMILQLEEDCLNVYRKKVEQTRKQKEDLIEELSFGELDIEKILSVLGERESFSRVEKLGGTLLEQLAKVEPVLEDLRRRRDERVEEFMVVQAQIVRLHAEISGTIENGDPVPPLVDETNLSLRRLAEFKSQLKELQTEKNLRLQKIDVQINCIHEICNMMSLDLKKELYDVHPSFVELGRTTSMSISDSTLERLAGKVHSLNQEKKQRLRKLQDLGSTLIELWNLMDTPTAEQKCFDHVTSLISVSPNTKMPQGCLARELIEKVDVEVKRLNCLKASKMKELVLKKMIELEEIYKSVHMDIDSDYEGRILNDLIDSGKADLSDLLTGMDGRITKAREHALSRKEILEKVEKWTLASEEESWLDEYERDQNRYNAGRGAHKNLKRAEKARMLVSKIPSLLENLTAKIKAWEKENGVPFMYDKIRLLDSLEEYTSRRQQKDEEKRRSRELKKLQEQYAAEQGATFGTKPSPARPPSARKPLGQSSNANIISGTPTSRRVCTPMARKGGLSSGKVKEAGKTAFIPANYVALPKDCSDNSNL</aaseq>

Gene Sequence

<dnaseqindica>1..54#522..725#801..1055#1134..1349#1950..2105#2219..2378#3128..3279#3395..3482#3894..3967#4053..4127#4505..4783#ATGGCGACGGCGCCGCCGCGGGTATCCTGCGGCTCCCTTCTCCAGGAACTTCAGGTTCGATCCCCGCGCCTGCTCTGTTCATACGGCCTCCTGGGACGCGGTTTTGGATTCAGGTCGAGGGCGTGTTCTTTTTGGTGCGATTTTTTTTAGGGAAGTCGTGGTTGATGGTGGGTGAGGGATTCGAATCATATATTTATTTTTTATTTTGGCTTTTGTGAGGAAAGATTGTTTGCTCTTTGGCGGCAAAGGTACTGGTATGTGGCCATGTGGGCGGAATCGGACGACGATCTTTGTGTTTTGTGATCCTTTGCTCTGTATATCGTGAGTACTTGTTAGAAACAAAGTTATCGCTCCTTATTTCGTGAATTCGATTGTGCTCGTTATTAGATTTTGTGGCGTCCCCTGATGATAATCTCGGTTCCCTCTTTTGTATCCATGTGTTCTCATCACATTGGATGTAAATTCTTTAATATCATTTATGCCTTTTTATACGAATCTGCTACTGTTATCTGTTGATCCAGGTACTCTGGGGACAAATTGGCCAGAATGAAGCAGAAAGAGACAGGATGATATTGCAGCTAGAGGAGGATTGCCTCAATGTTTACAGAAAGAAAGTAGAGCAAACAAGAAAGCAAAAGGAGGACCTGATTGAAGAACTTTCTTTTGGTGAATTGGATATTGAGAAAATCCTTTCTGTTCTTGGAGAGCGAGAATCTTTTTCTAGGGTGTGTGAATTGCTTTATCCATTCCATGCCTTTTTGTATGTATCATTCGCTTATTGTATGTTTTTACATATGCAGGTAGAGAAACTTGGGGGTACATTACTGGAACAACTTGCGAAAGTAGAGCCTGTTCTGGAAGATTTGAGACGGAGGAGGGATGAGCGAGTCGAGGAGTTTATGGTTGTACAGGCGCAGATAGTTCGGTTACATGCAGAAATTTCAGGAACAATTGAAAATGGGGATCCTGTACCTCCTTTGGTGGATGAGACAAACCTATCCTTAAGGAGGCTAGCAGAGTTTAAGAGCCAGCTTAAGGAGCTCCAAACTGAAAAGGTTGTGCACCATCTTTAAAACTTTGCCTCCCAGATTCTTGAGCTCTTATGTTTATATTGATTGTTTTAAAATTTTCAGAATCTCAGGCTGCAAAAGATTGATGTACAGATCAATTGTATCCATGAAATCTGCAACATGATGTCTCTTGATCTCAAGAAAGAACTTTATGATGTTCATCCCAGCTTCGTTGAGTTGGGAAGGACCACATCGATGAGTATAAGCGACAGCACACTTGAAAGGCTTGCAGGAAAAGTTCATTCGTTAAATCAAGAAAAGAAACAGAGGCTTCGGAAGGTATTTATATTTGTTGCCTCACTTATTAATTGTATCTCTCAAAAACATTGTTCATATAGTAAAAGAAGTTGCTACATCATTCTTATTGCAACACTTTCACATTGTTCGTTTGTTTCTACTACTGTTTGAAAATTTGGCCTTCAGTATGCTAGATATTATTATGTGATTCACCTTGACAAAAGCATAATTTTCAGGAAATTCTCTAGGGCCATATAATGGAAATTAAGTTCATTGTATTGAGAGCATAATTTTTGAGATCATAATGTAACAGCTTACCATCTTATATTTTCATTTTTCTTACTTCATGTACACCATCTCCGGATACTCAGATTGTGTACTGTCAAGAGAATGGTTTCCTGACTTTACCATTCATAACAGAGTCACACTAATGTAATATTTTTACGTACCATTATACTACAGCATTTTTATTTTCCATCAAGTTTTTATTCCTCATGTGGTCCCTCTTGTTCTTCACATCGTCTGTGCTTCGCTGGTGATTTGCATGTTATTACTTCATGAATTTACAGACGTTTATTTTCACTCCATGTTTTTTCCTCATATATCTATACTCACTGCTGAACTTTGCTTTCTGTTTTGCAGTTGCAAGATCTTGGCAGCACACTTATTGAGTTATGGAACCTAATGGACACACCAACTGCTGAACAGAAATGCTTTGACCATGTTACTTCTTTGATTTCAGTCTCACCAAACACAAAAATGCCCCAAGGATGCCTTGCACGTGAACTTATTGAGAAGGTTACAATTGATCGACCATTTTATGTTCTTTTGCTTTATTTGGATTGTCATTGAAGCTAATGTCTCTGAGTTAACTTAATTATTGTGTAAAATCCTTTCACTCCTTATTTTAGGTAGATGTTGAGGTTAAGAGGCTGAATTGTTTGAAAGCCAGCAAAATGAAAGAGCTTGTATTAAAGAAAATGATTGAGCTTGAAGAGATCTACAAAAGTGTTCACATGGATATTGACAGTGATTACGAGGGGAGAATTCTCAATGATCTTATTGATTCTGGTAAACTTCTCTCTTGTTCCCTTCAACCTGAGAAATTCATGACTGAAGTCATCATACAGTTCTCTTCTTATATTGTGCCTTTCCATTGTGTTCTGGTAGTGAAGCGAACTATGTTTTCATTTGACTTGTAGACAAACTCAAATCTTGGCATAAGAATGAAATAGGTTCCTTCTAGAACAAAATGTACACGTATTGTTTGGTTTCTAGGAAAGGCCTGTTTAATTGAAACCACTGGTTTCTTATTATAGCATACCCTAATCCACAAACATTATCATGTCGTTATCATCTCTTAATACTTTTGTGCATTTGTTATTTGATTATAAACCCACCAAATACTGTTTAGAACGTGATGTAATTGTGCCCCATATAACTTGCACTTATCCTTAGAATGCTATTATAATATTTTTCCTTGATAGACTGAATTATCCTTGTACTGCTATTGTAATGTGCGTTTTACATCTGGATACACAAGTTGCTTCCCTTCTTCATGAAAAAGAAGAATGATTAGTTAATTATTTTCATTATTCCAAATATTTAGTGTACTATTAATAAGATTTATGATTAGCAATTACAATATAGGTTGTTTGCTTCACTTTTAGCCTTTATGTTGATTCAGTCTTCAATTCCATCTGGATTTATCCAATTGTTGTGGAATTTATTAGTCACTTTTGATAATTTTCTCTTTAGTGTATCCCCTTATGGTTTCTTACTGCTAATCATCAAATTTGATGATATTTGCACCTTGTCAGGTAAAGCAGATCTCTCAGATTTGCTTACAGGAATGGATGGTCGAATTACAAAGGCAAGAGAGCACGCTCTAAGCAGAAAGGAAATTCTAGAGAAGGTTGAAAAATGGACATTAGCATCTGAAGAGGAGAGTTGGCTTGATGAATATGAAAGGGTACCTTAAATTTTCTCTTTTTGACAGGATGCTCTTCAGTTTAAACAGTTGCAACATATCTTCAGTCTAACTTCATCTGTCATATATCAGGTCTAATTCTTAGTTTTCATTTCAGGATCAGAATCGCTATAATGCTGGTCGAGGAGCTCACAAAAATCTCAAGCGCGCTGAAAAAGCAAGGATGCTGGTTAGCAAAATTCCATGTAAGCCTATATACTTGTTTTTTTTTGTGGCTGTACTGGTTTATTGGAGATACCAGATATCTTATGTTTTAATGTACTCCAATCATTAAAGATACTTCAAAAGGCCTATCATCACTATTTTGGTTTACATAAAGGGTAGCTAATGAGTACATCAGTATTCAATTGATCATTTCTCTTTTTCGTTTATTCCTTAACTATATGTCTATATCCATATGCTAAATTGCTTCTTGAAATATTCTTAGTGGTCCCTATTTGGTTAGGATCTAATTTCTAGTTGCATTAACAACTACCATTAGTTCTAACATCTGAACTTTATTTCTGGCACTTTTTTCTTGTTTTAAGTTTTTTTTTATCAACAAGTTATCACTGAATATACCTAATTTTCAACTTCCATGTGATTTTATACTTTAGCTCTGCTGGAGAATTTAACTGCTAAAATTAAAGCTTGGGAAAAGGAGAACGGTGTCCCATTTATGTATGATAAGGCAAGTCCCGTTTCTCAATGCTACTGTTTTAATTAATTTTGTCAATTTCATCTTGCTTATTTACAATTTGGGCTTTCATTTACAGATAAGGCTGTTGGATAGTTTAGAAGAATACACCTCAAGAAGACAGCAGAAAGATGAGGAGAAACGGCGATCGCGGGTTGGTTTTTGTTTTCTCTGCCATCTGTCGTGCCCAATCTTGGTTGCATTCGTTAGTGTGTTCAGTTTGTAGTTTCCTTTAGCATATATTGCTAGTATATCCATAACTATGCTTTTGCTTGGCAGGCGGATCTACCGCTGACACTAACTGTTGGGGGTGACCCCTAGTGTCCATGGTTTGCGGACGTCCTGCCATGGCACGCTAGATACTTTAGGCGTCTTGTTTTTTTATCACTTATTGGCAGTTTTGCCAGCTGAATGTCTCCTTTATTTCATATGCATGATCTACTTTTAGTGATACTATCATGGAAGGAGAGGTTAACTTCCCTGGTACAAATTCCATGACTTAATGTTTTTGGATGTTTCTACTCTTTGCAGGAGCTCAAGAAACTGCAAGAACAGTATGCAGCAGAACAAGGTGCTACGTTTGGAACGAAGCCAAGCCCTGCGCGTCCACCTTCGGCTAGGAAGCCTCTTGGGCAGAGCTCGAACGCCAACATAATCAGTGGAACTCCTACCAGCCGCCGTGTCTGTACCCCGATGGCACGCAAGGGAGGCTTGTCTTCTGGAAAAGTGAAAGAGGCTGGCAAGACAGCCTTTATACCGGCAAACTATGTGGCCCTTCCCAAGGATTGCTCAGACAATTCTAACCTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019860

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA019860&oldid=48616"