BGIOSGA019879

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Revision as of 02:59, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019879| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019879, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA019879

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019879, complete gene.

LocusTag

OSJNBA0084P24.16

Ensembl Transcript ID

BGIOSGA019879-TA

Ensembl Protein ID

BGIOSGA019879-PA

Length

4042

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21625078..21629119

Sequence Coding Region

21625078..21625570,21626032..21626277,21627136..21627331,21627412..21627671,21627828..21627955
,21628341..21628544,21628672..21628722,21628853..21629119

Genome Context

<gbrowseImage1> name=IndicaChromosome05:21625078..21629119 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:21625078..21629119 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTCGCCTCCGTCCGCTCTCTCCGCCGCCTCTCCTCCTCCTCGTCGTCCTCATCCTTGTCCCCCGCCTCGCTACGCCGCCTCCTCCTCCTCCTCCACCGCCCGCCGCCTCCGCCCCCGCCCCCTCGGCCTCCTCTCCCGCCCTTCCAAACCCTAGCCCGAGGCCTCCTGCCGCGCATCGCGGCGCGGCCTGTGCCCCGCCGCTTCTCCACCGCGTCCTGCTCCTCCACGCTCTTCCGCGTGGGGGAATGCGGCGCCCCCGGCGCCACCGCCATACCCGAGGCGGAGCGAGGCGAGGAGGAGGAGCGTGAGGGGGAGGATGGAGGCGAGGCCGACGCGGCGGTGGAGGTGGCGGCGGGGAGGCATGACACGGACGCGTACGCGGCGGTGGAGCTGGCGCTGGACTCGGTGGTGAAGGTTTTCACGGTGTCCAGTAGCCCCAACTACTTCCTGCCGTGGCAGAACAAGGCGCAGCGCGAGAGCATGGGCTCAGGATTTGTAATTCCGGGGAGGAGAATCGTCACAAATGCTCATGTTATAGCGGATCATACCTTTGTTCTCGTGAGGAAGCATGGGTCGCCTACTAAGTACAAGGCAGAAGTCCAGGCTGTTGGCCATGAGTGCGACTTGGCTCTTCTGAAAGTTGATAGTGAGGAGTTTTGGGATGGAATGAACAGTTTGGAGCTTGGAGACATTCCCTTCTTGCAGGAAGCAGTTGCTGTGGTTGGCTACCCGCAAGGGGGGGACAACATTTCTGTCACCAAGGGTGTGGTCTCTAGAGTTGAGCCAACACAATATGCACATGGTGCTACTCAGCTCATGGCCATACAAATAGATGCGGCTATCAACCCAGGAAACAGCGGAGGGCCTGCAATTATGGGCGACAAAGTTGCTGGAGTTGCTTTTCAAAATTTATCAGGGGCAGAAAACATTGGGTATATTATACCGGTGCCTGTAATTAAACGTTTCATCTCTGGAGTGGAAGAGAGCGGTAAATATTCTGGTTTTTGTACCCTTGGAATATCTTGCCAGGCCACAGAGAATATTCAATTAAGAGAGTGCTTTGGGATGAAGCCTGATTTGACTGGAGTGTTAGTGAGTAGAATAAATCCTCTATCTGATGCTCACAGAGTTCTTAAGAAAGATGACATTCTTCTTGAGTTTGACGGTGTGCCTATAGCAAATGATGGCACAGTCCCATTTCGAAATAGGGAGAGAATCACCTTCGATCATCTGGTGTCCATGAAGAAGCCTGGGGAAATGGCGGTTCTCAAAGTTCTAAGAGATGGCAAAGAGCATGAATTGAATGTCACTGTTAGACCTTTGCAACCTTTAGTCCCTGTACATCAATTTGATAAACTACCCAGCTACTACATCTTTGCTGGTTTTGTTTTCATCCCACTGACCCAGCCTTATCTCCATGAATTTGGAGAAGACTGGTACAACAATTCGCCACGCCGACTGTGTGAACGGGCACTGAGAGAGCTTCCAAAAAAAGCTGGTGAACAACTAGTTATCCTATCTCAGGTTCTCATGGATGATATTAATGTTGGTTATGAAAGGCTCGCTGAACTACAGGTAAAAAGGGTGAACGGTGTGGAAGTAGAAAATCTGAAGCATCTGTGCAGCCTTGTGGAAAGCTGCACTGAAGAAAACCTGAGATTTGATCTGGACGATGAGCGGGTGATCGTCCTGAAATATCAGAACGCAAAGCTCGCCACGTCCCGGATCTTAAAACGGCACAGGATACCGTCGGCCATATCTGCTGACCTCGTCGACGAACAGGCGACTGACGACGGTGAGGAGGCGACTAATGGTGAGATCGAGGCATCATGCACTAGCTAA</cdnaseq>

Protein Sequence

<aaseq>MLASVRSLRRLSSSSSSSSLSPASLRRLLLLLHRPPPPPPPPRPPLPPFQTLARGLLPRIAARPVPRRFSTASCSSTLFRVGECGAPGATAIPEAERGEEEEREGEDGGEADAAVEVAAGRHDTDAYAAVELALDSVVKVFTVSSSPNYFLPWQNKAQRESMGSGFVIPGRRIVTNAHVIADHTFVLVRKHGSPTKYKAEVQAVGHECDLALLKVDSEEFWDGMNSLELGDIPFLQEAVAVVGYPQGGDNISVTKGVVSRVEPTQYAHGATQLMAIQIDAAINPGNSGGPAIMGDKVAGVAFQNLSGAENIGYIIPVPVIKRFISGVEESGKYSGFCTLGISCQATENIQLRECFGMKPDLTGVLVSRINPLSDAHRVLKKDDILLEFDGVPIANDGTVPFRNRERITFDHLVSMKKPGEMAVLKVLRDGKEHELNVTVRPLQPLVPVHQFDKLPSYYIFAGFVFIPLTQPYLHEFGEDWYNNSPRRLCERALRELPKKAGEQLVILSQVLMDDINVGYERLAELQVKRVNGVEVENLKHLCSLVESCTEENLRFDLDDERVIVLKYQNAKLATSRILKRHRIPSAISADLVDEQATDDGEEATNGEIEASCTS</aaseq>

Gene Sequence

<dnaseqindica>1..493#955..1200#2059..2254#2335..2594#2751..2878#3264..3467#3595..3645#3776..4042#ATGCTCGCCTCCGTCCGCTCTCTCCGCCGCCTCTCCTCCTCCTCGTCGTCCTCATCCTTGTCCCCCGCCTCGCTACGCCGCCTCCTCCTCCTCCTCCACCGCCCGCCGCCTCCGCCCCCGCCCCCTCGGCCTCCTCTCCCGCCCTTCCAAACCCTAGCCCGAGGCCTCCTGCCGCGCATCGCGGCGCGGCCTGTGCCCCGCCGCTTCTCCACCGCGTCCTGCTCCTCCACGCTCTTCCGCGTGGGGGAATGCGGCGCCCCCGGCGCCACCGCCATACCCGAGGCGGAGCGAGGCGAGGAGGAGGAGCGTGAGGGGGAGGATGGAGGCGAGGCCGACGCGGCGGTGGAGGTGGCGGCGGGGAGGCATGACACGGACGCGTACGCGGCGGTGGAGCTGGCGCTGGACTCGGTGGTGAAGGTTTTCACGGTGTCCAGTAGCCCCAACTACTTCCTGCCGTGGCAGAACAAGGCGCAGCGCGAGAGCATGGGCTCAGGTAAGCTTAGCAAATCTCAAGCAGTCAGCAGCGAGAGTCCTGAGTAGCGTGTTTCGATCTCTGTTGCTGCGGTAGATGCGTAGGTATGGCGGGCAAGCGATTGCCATTTCTATTGCATGGATCGGTGGAGTGTTACCTTGATGCTGATTGGGCTTAGTTTGACCTTTTATCGATGATCAATAACGGGGTAGTTTGCTGGTTTCAACTGACAGAGACAGTGCGCCCAATTTATGTATTTCTGCTAGTGTGTACTTACTAAGTAGTATGATGAAATGTGCTTCTTGGTTTATGGTAGTCACATGGAGTGCCCTACTATGTTTCATGAACTTTTGAAATGACCTTGCTGTGGGATAAGCCGAACAAATCAGTCATTTGTGGGTTGCTAACTGAGAAAACCTTCTGAAGTTATGCTTGTTTTTTTGGATTTTTGGTTCATCTGCTAATGCATGTCTGTGTTGTAGGATTTGTAATTCCGGGGAGGAGAATCGTCACAAATGCTCATGTTATAGCGGATCATACCTTTGTTCTCGTGAGGAAGCATGGGTCGCCTACTAAGTACAAGGCAGAAGTCCAGGCTGTTGGCCATGAGTGCGACTTGGCTCTTCTGAAAGTTGATAGTGAGGAGTTTTGGGATGGAATGAACAGTTTGGAGCTTGGAGACATTCCCTTCTTGCAGGAAGCAGTTGCTGTGGTTGGCTACCCGCAAGGTATCAATTTTGAAACTAACAGTCCTATATCATTTGCAGTATTATGTGCTTAGATGTTAAACTTGATAGTTTTATGATTTCATCCACTGAACGCATTGAAGTCTATGCAAATGCCATACCCTAACCATCTAGTTTGTATCGGCGTACTGTTCTGTTGTAAATGAATGACAACGATCTAATTGATCACTGAAAGGTCAGTTAGACAAATATGCTAATGAAATTTTACACAATTTTGAAAGAAAGTGAAATTTACCCTATGTTTGTAACCCACTTTTAACATTTGTATAGATAATTTATCATGCCATTAGATTCATCATTTTACCCTTTGTTTGTAATCCACTTTTAACATTAACATTCATATACTCCCTCCATTTCACAATGTAAGACTTTCTAGCATTGTCTATATTCATATAGATGTTAATGTGGGCAATATATTTGTCTAGATTCATTAATATCTATACGAATGCGGGCAATGCTAGAAAGTCTTAAATTGTGAAATGGAGGAAGTAGATAATTTATTATGCTGTTAGACTCATCATTATGAGATTATTTTTTTTTGTATCCCCAGCAATTTTTATGTGGTAGATATTCCTCCTAGCTTCACCTTATACCACATGAACAGCAAGGTACTACACACTTCTCTGTTGAGTGATACCATGATGATCTATCTATGCATGCATGTTTACACAGTTAATTCAGATAGATTAAAATTTTCTCGTGCAGCTTTTCTGCCTCCGATGCTATTGCTAGCATGAATAGCTTTATAGGGCCTTCTCAGTTCTTACTGTAACTATTCTTGTTAGAAAGAAAATCATAAAAATGTGAACAAATTTATGTTTCTGGCTTTCCATTGCTCAGGGGGGGACAACATTTCTGTCACCAAGGGTGTGGTCTCTAGAGTTGAGCCAACACAATATGCACATGGTGCTACTCAGCTCATGGCCATACAAATAGATGCGGCTATCAACCCAGGAAACAGCGGAGGGCCTGCAATTATGGGCGACAAAGTTGCTGGAGTTGCTTTTCAAAATTTATCAGGGGCAGAAAACATTGGGTAGGTCTCTGAAATAACTTTCTAGTCATGCACCAATTGAACCCCTTGCTTTAGCTAGAAATGTAATCCTCCTCTTTCAGGTATATTATACCGGTGCCTGTAATTAAACGTTTCATCTCTGGAGTGGAAGAGAGCGGTAAATATTCTGGTTTTTGTACCCTTGGAATATCTTGCCAGGCCACAGAGAATATTCAATTAAGAGAGTGCTTTGGGATGAAGCCTGATTTGACTGGAGTGTTAGTGAGTAGAATAAATCCTCTATCTGATGCTCACAGAGTTCTTAAGAAAGATGACATTCTTCTTGAGTTTGACGGTGTGCCTATAGCAAATGATGGCACAGGTGGGCTTCACACGACTGTGTACTTTTACATATTTTGGTTTCATGTTCCTGTATTATTTTACCTGGTAGATCATAGCACATAACTATCCTTGGACAAAATATTTGGTATGCCTTGAGTACATTTTTTTTTCACACCAGCTTTTTTAATGCCTGCAGTCCCATTTCGAAATAGGGAGAGAATCACCTTCGATCATCTGGTGTCCATGAAGAAGCCTGGGGAAATGGCGGTTCTCAAAGTTCTAAGAGATGGCAAAGAGCATGAATTGAATGTCACTGTTAGACCTGTGAGTACTTGCAATGTTGCTTATAGAAGTTATACATTTTGATTAACCAGGGTGTTTTTTCTTTCTGCTGCTGGTTACTAATATGATTCAAATGCTACTCTCTTTTATCCTTGCACCTAGTTTTGCTAGTTTTAGGCATGGGTAATGGACTCAACCTTCTCCAAACTTATAATAGTCATTATATAGAGATTTATGTGCAGAACTGCAGATGTATCAGATATCTCAATGATCTCTGTAGGCTAACAAATTGGACCCAAGTATTTTGTACACATGCTTCCATGCCTATGCTTTGCATTCATCATTTCACTTTGCACTTACTTGATCTGTTCAAGTGCTTTTTGGATACGTACACTGGAAATGATCTTATATATAATTTCTTGTGCAGTTGCAACCTTTAGTCCCTGTACATCAATTTGATAAACTACCCAGCTACTACATCTTTGCTGGTTTTGTTTTCATCCCACTGACCCAGCCTTATCTCCATGAATTTGGAGAAGACTGGTACAACAATTCGCCACGCCGACTGTGTGAACGGGCACTGAGAGAGCTTCCAAAAAAAGCTGGTGAACAACTAGTTATCCTATCTCAGGTACTACTTCGCCATCCTTCTCTATTCTAGTACATTTCAAATTAGCTGCTTCAGGATCTTATGAGTATTGCAGGAAACATTCTGCTGAACTTTTCAGTATATGTGTTCTCACTGATTATTGTCTTAGGTTCTCATGGATGATATTAATGTTGGTTATGAAAGGCTCGCTGAACTACAGGTACCGTTGCTGTACAGAAATCCTTAGTTTTCACTACCCAAGTACAGAAATTCTTCAGCATTCTACATTTCTACACATATGTAGTGTCCAGTAGGACATGCACTGATGAAGCTGCATAATATATGATCAGGTAAAAAGGGTGAACGGTGTGGAAGTAGAAAATCTGAAGCATCTGTGCAGCCTTGTGGAAAGCTGCACTGAAGAAAACCTGAGATTTGATCTGGACGATGAGCGGGTGATCGTCCTGAAATATCAGAACGCAAAGCTCGCCACGTCCCGGATCTTAAAACGGCACAGGATACCGTCGGCCATATCTGCTGACCTCGTCGACGAACAGGCGACTGACGACGGTGAGGAGGCGACTAATGGTGAGATCGAGGCATCATGCACTAGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019879