BGIOSGA019884

From RiceWiki
Revision as of 02:59, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019884| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019884, complete gene.| tag = OsI_199...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019884

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019884, complete gene.

LocusTag

OsI_19987

Ensembl Transcript ID

BGIOSGA019884-TA

Ensembl Protein ID

BGIOSGA019884-PA

Length

2477

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21652841..21655317

Sequence Coding Region

21652841..21653533,21653882..21654049,21654188..21654259,21654621..21654701,21655189..21655317

Genome Context

<gbrowseImage1> name=IndicaChromosome05:21652841..21655317 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:21652841..21655317 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAAGAGGCGGAGGGAAGAGTTGAATGTGAAGGCCAAACCCAGTGACGACAAAGGGCCACCAACAAGGTGCAACCCTGGGTGTGTCAGATCACTGGCTAAGCTGCTTCCAACGGCAGTAGAGCAAAAGATTGAAGAACTCGGTTTAGGGAACCTCTTCAAGTTAAAGCTAGAAGCACTAAGCTGCAGAAAAATCTGCGGAGACCTTTTGGACAAAGCAGTTGTTCATGCAGCGTCTGATCTAATTGAACTCCCCATGGGGGATGTTTCATTGTGGATCTTGGAAAAAGTGGTGCAGCATGCTATTGACATGCCAGTTGGCTCTGTTAAGGGGCTCTCCAAATCAAATAACGCAACAGAATACAAGAGGATGTACGATGCATTGAGGTTCGTATGTAAAAAGTTCCCTTTGCCAAAGGGAAAGGCCAGAACAGCAGCTGGGGGTGCACAGGACAGCGAAGCTGTTGGGGGTGCACAGGGCAGCACAATAGCTGGGGATCAGGCAGATGCTAGGGGTGCACAGGACAGCACAGCAGCTGGGGATGCACAAGACAGCACAACAGCTGCTGGGGATGCACATGACAGTGAAGAGGATTTTGGCGACTATGATTCCACCCCGGCTGACAAGAGAAGAAATATTTTCGTACCGGACAGAATTGTGAACCTGGTTATACATTGTGAGGACGAGGAGGTTGTTATCTTGGACTGCATTGAAGGGAATGACTTGCAAGTGAATGAAGCTGGTAGAATGTACCTATACAATGATGACAAGGTCAAGGGACTTCTCAAGGAAAATCCAAATGATATGATAAAGAAATGGAGGGGTCGGATGACATCGAAGCCCTTAGAGGCTTTTATTAGGATTGAGGTGCCTAAGAGTACTGAGATGCCTAAGAGGATTGAGGTGCTTGAGAGGACTGAGGTGATTGAGTCTGAATTGCTGGGCAAACGCAATGGAACTGCCTGTCTGGACAATGAGCTAACAACAGAGAAAATGGAGAGCGTGAAGCAGATCATGGTAGCCAAGCTGATCAAAATTCCCACACAACCTCAGGTAGATACAATGGGTCCTACATTACAAGGAAATCTCTATGAAAAGTATTATGCATGTTTCTCTGTGTCTCTTAACAACGTAGTCTAG</cdnaseq>

Protein Sequence

<aaseq>MGKRRREELNVKAKPSDDKGPPTRCNPGCVRSLAKLLPTAVEQKIEELGLGNLFKLKLEALSCRKICGDLLDKAVVHAASDLIELPMGDVSLWILEKVVQHAIDMPVGSVKGLSKSNNATEYKRMYDALRFVCKKFPLPKGKARTAAGGAQDSEAVGGAQGSTIAGDQADARGAQDSTAAGDAQDSTTAAGDAHDSEEDFGDYDSTPADKRRNIFVPDRIVNLVIHCEDEEVVILDCIEGNDLQVNEAGRMYLYNDDKVKGLLKENPNDMIKKWRGRMTSKPLEAFIRIEVPKSTEMPKRIEVLERTEVIESELLGKRNGTACLDNELTTEKMESVKQIMVAKLIKIPTQPQVDTMGPTLQGNLYEKYYACFSVSLNNVV</aaseq>

Gene Sequence

<dnaseqindica>1..693#1042..1209#1348..1419#1781..1861#2349..2477#ATGGGGAAGAGGCGGAGGGAAGAGTTGAATGTGAAGGCCAAACCCAGTGACGACAAAGGGCCACCAACAAGGTGCAACCCTGGGTGTGTCAGATCACTGGCTAAGCTGCTTCCAACGGCAGTAGAGCAAAAGATTGAAGAACTCGGTTTAGGGAACCTCTTCAAGTTAAAGCTAGAAGCACTAAGCTGCAGAAAAATCTGCGGAGACCTTTTGGACAAAGCAGTTGTTCATGCAGCGTCTGATCTAATTGAACTCCCCATGGGGGATGTTTCATTGTGGATCTTGGAAAAAGTGGTGCAGCATGCTATTGACATGCCAGTTGGCTCTGTTAAGGGGCTCTCCAAATCAAATAACGCAACAGAATACAAGAGGATGTACGATGCATTGAGGTTCGTATGTAAAAAGTTCCCTTTGCCAAAGGGAAAGGCCAGAACAGCAGCTGGGGGTGCACAGGACAGCGAAGCTGTTGGGGGTGCACAGGGCAGCACAATAGCTGGGGATCAGGCAGATGCTAGGGGTGCACAGGACAGCACAGCAGCTGGGGATGCACAAGACAGCACAACAGCTGCTGGGGATGCACATGACAGTGAAGAGGATTTTGGCGACTATGATTCCACCCCGGCTGACAAGAGAAGAAATATTTTCGTACCGGACAGAATTGTGAACCTGGTTATACATTGTGAGGACGAGGAGGTAAAACAATTAATACGTGGACACGGATATGCTGGTCAGGCTTTTTATTGGCGTGGCCATTGATAGACTGCTAAAGCCAGTACAAACGAGTTATGTAAGCCCAACTACACTTGAAGGGGTACATGACCTTGAAAAATTACGCGACATAGAATGGCCATATATGGTCTATCAAGGCTTGAAAGACGAGTGTAGTGCCTTTCCCGAAAAAAAGGGGAAAAGTTATATCTCCATATATGACATGTTGTGTTGCTCTACTAATTGTAAGTAATAGGACCTGCTTCAAATAATATCTTTTCTCATTTTGGGTATGGAAGTGACTAACTGTAGTGGTGCTGCATTGGTTCACAGGTTGTTATCTTGGACTGCATTGAAGGGAATGACTTGCAAGTGAATGAAGCTGGTAGAATGTACCTATACAATGATGACAAGGTCAAGGGACTTCTCAAGGAAAATCCAAATGATATGATAAAGAAATGGAGGGGTCGGATGACATCGAAGCCCTTAGAGGCTTTTATTGTAAGTACTGAGGACATGTTCATCTGTTAAAGTTTTATAATTATGACTGCACCTGATTGACTTTGTATTTTTGTGTGTCCATTTCAGTTTAAGAAGTGGGAGGATACTTGTTGTGCAAAATTTGTAGAAGTGCCATAGAGGATTGAGGTGCCTAAGAGTACTGAGATGCCTAAGAGGATTGAGGTGCTTGAGAGGACTGAGGTGATTGAGGTAAGTATCCATGCCCCTTTAGTTATGCAAGATTTGTAGTGGTTTGTGAGATTGACTTATGCTATCCTTTATCTCTAGTGTCTTGATATAGAGAAAGAGTACCAGAAGCATGTCTTAGATCTTGGATTTTGATGAGTTCCGTGTGGTTGAGAAGACATATGTTGAATGCTTCGAACCCTTTGGTCATATGCATTCAGAGATACTGCATCTAGTATGCCACCTATGGTCACTGGATTGGAATGAGAAAATCATCCTGAGTGCATATGCTACTGTAAGTACTTATCCAATGGATTTTTTATGTTGTAAGTACTTATCCAAGAACTTATTCAAGAACTTTATGTTGTCTCTTTGATGATTCCAGTCTGAATTGCTGGGCAAACGCAATGGAACTGCCTGTCTGGACAATGAGCTAACAACAGAGAAAATGGAGAGCGTGAAGCAGGTTTGTTCATTATTTTACCGGATCTTTGATTTCAATGTTACTAGGGGAGTGCCTGTGCGTTGCTACGGTCTGAGTATTTCGTCTCTGTGCTAGACCGAATGTGGCTCAAGCACACCCATAACCTAGTTTTTTATGACCATCTCATCCCTTTGCCTATATAAGGTCTTCCGATCGTAAACGTGTACTCCACATAAATCCATCTTCCTTCATTCCTACCCCTAATATTTCTGCTTCCTTCGTGCGGCCACCTCCTCCCTTTTCACTCTTTTGCCTACTCAATCTTTCTCCTCCCCTCCACATATTTCTGAAACCAATATTTCACGGGTTCTATTTTTTCACCCTATACTAATGTTTTAAATACAATAACAAAAGCACGAGTTGCTCTGTACTAATGTTTTTAGTTGTTTTGCTTAACCACTAAAACAAGCATAAACAAAGAAGAGTAAAGTACATAATTAAGTGACATAGTTCAATTAAAAGTGTTCAGATCATGGTAGCCAAGCTGATCAAAATTCCCACACAACCTCAGGTAGATACAATGGGTCCTACATTACAAGGAAATCTCTATGAAAAGTATTATGCATGTTTCTCTGTGTCTCTTAACAACGTAGTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019884