BGIOSGA019885

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Revision as of 02:59, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019885| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019885, complete gene.| tag = P0579A0...")
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Gene Name

BGIOSGA019885

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019885, complete gene.

LocusTag

P0579A05.9

Ensembl Transcript ID

BGIOSGA019885-TA

Ensembl Protein ID

BGIOSGA019885-PA

Length

4670

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21675373..21680042

Sequence Coding Region

21675373..21675459,21676045..21676107,21676273..21676356,21676717..21676824,21676966..21677138
,21678133..21678244,21678466..21678546,21678633..21678695,21678777..21678878
,21679068..21679192,21679315..21679525,21679623..21679697,21679989..21680042

Genome Context

<gbrowseImage1> name=IndicaChromosome05:21675373..21680042 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:21675373..21680042 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGAGGAGTACGACGTGATCGTGCTCGGGACGGGCCTCAAGGAGTGCATCCTCAGCGGCCTCCTCTCCGTCGACGGCCTCAAGGTGTTGCACATGGATAGAAATGACTACTATGGAGGGGATTCCACCTCGCTCAACCTTAACCAGCTGTGGAAGAGGTTTAGAGGGGAAGACAAACCCCCAGCTCATCTGGGTGCAAGCAGAGATTACAATGTAGATATGGTCCCAAAGTTTATGATGGCAAATGGCACATTGGTAAGGACCCTGATTCACACTGATGTGACAAAGTATTTGTCATTCAAAGCTGTTGATGGGAGCTACGTCTTCAGCAAAGGGAAGATTCACAAGGTACCTGCTACTGACATGGAGGCTCTGAAGTCCCCTTTGATGGGCCTTTTTGAGAAACGCAGAGCAAGAAACTTCTTCATTTACGTCCAAGATTATGATGAAGCTGATCCAAAAACACATCAAGGGTTGGATCTTACTACAATGACAACTAGAGAACTGATAGCAAAATATGGTTTAAGTGACGATACTGTGGATTTCATCGGCCATGCACTTGCTCTTCATAGAGATGATCGTTACCTAAATGAACCAGCAATTGATACTGTAAAAAGGATGAAATTATATGCAGAGTCCCTTGCACGCTTTCAAGGAGGTTCACCTTATATTTATCCACTGTACGGTCTGGGTGAGCTGCCACAGGGTTTTGCTCGCCTGAGTGCTGTTTATGGTGGCACTTATATGTTAAATAAGCCAGACTGCAAGGTTGAATTTGATATGGAAGGGAAAGTCTGCGGCGTTACATCAGAAGGAGAAACTGCAAAATGCAAGAAAGTTGTTTGTGACCCTTCCTACTTACCCAACAAGGTTAGGAAGATAGGAAAAGTTGCACGCGCTATTGCTATTATGAGCCACCCGATTGCAAACACAAATGACTCGCACTCAGTCCAGATTATTTTGCCACAGAAACAACTTGGACGCAAGTCAGACATGTATGTCTTCGGTTGCTCATACACACACAATGTTGCTCCAAAAGGGAAGTTCATTGCATTTGTGTCTACAGAAGCAGAGACTGACCATCCAGAGTCTGAGCTAAAGCCTGGGATTGATCTACTTGGTCAAGTAGATGAGCTATTCTTTGATATCTATGATAGATATGAACCCGTGAATGAGCCATCTCTTGATAACTGTTTTGTCTCAACTAGCTATGATGCCACCACACATTTTGAGACAACGGTGACAGACGTTCTTAATATGTATACACTGATCACTGGAAAGACTGTTGATCTCAGTGTCGATTTGAGTGCTGCCAGTGCTGCTGAAGAATATTAG</cdnaseq>

Protein Sequence

<aaseq>MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKRFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPATDMEALKSPLMGLFEKRRARNFFIYVQDYDEADPKTHQGLDLTTMTTRELIAKYGLSDDTVDFIGHALALHRDDRYLNEPAIDTVKRMKLYAESLARFQGGSPYIYPLYGLGELPQGFARLSAVYGGTYMLNKPDCKVEFDMEGKVCGVTSEGETAKCKKVVCDPSYLPNKVRKIGKVARAIAIMSHPIANTNDSHSVQIILPQKQLGRKSDMYVFGCSYTHNVAPKGKFIAFVSTEAETDHPESELKPGIDLLGQVDELFFDIYDRYEPVNEPSLDNCFVSTSYDATTHFETTVTDVLNMYTLITGKTVDLSVDLSAASAAEEY</aaseq>

Gene Sequence

<dnaseqindica>1..87#673..735#901..984#1345..1452#1594..1766#2761..2872#3094..3174#3261..3323#3405..3506#3696..3820#3943..4153#4251..4325#4617..4670#ATGGATGAGGAGTACGACGTGATCGTGCTCGGGACGGGCCTCAAGGAGTGCATCCTCAGCGGCCTCCTCTCCGTCGACGGCCTCAAGGTACGTGGCTAGGGCTCTCGTCTCTCTCTCTCTCTCTCTCTCACCCGCTCGCCGCCGGCTACTAGCTTCCTCAGATGCTCGCCGTCGCCGCCCCCCCGCCGATCCGCCCGCTCCCGTGCTCGGATTCCGCGTCGCTCGACACGGGATCGGGTGTCTCTAGGTGTATCTCCCGTCGATCGGCGTGGGCTGGGATCGCGTAGATCGGGGCTCCGCCGCCCTCGTTTTGGTCTTGGACTCGCAGCGCCGCGCTTTAGATGGGGTTGTAGCTCGCCCATTTGGTCGCTCGTTTAGTGAGCTCTGTAAGCGTAGCGAGATGGTAATTCGTGTAGAGATCGTGGCTGGGGTACCCCGCTTGGATGGGTATAGGTTGCGCGCGATGGTTGTGGTGGTTGCTTGCGTTAGGGGAGGAATCGTGAGTTTTTTTTTTGGGGGGCCTCGGCTAGTGATATCTAGTTTGCTTTGCGTGCTTGAGTAGCCTGGTTCTCTATGCTGGCTTCAGCAAATGATTTTCAATGACATAGCGGGACAGTGATATCGGGAAATTCACAACAAGATCTAACAGACGTGCTTGTGATGGTTTTTCAGGTGTTGCACATGGATAGAAATGACTACTATGGAGGGGATTCCACCTCGCTCAACCTTAACCAGGTAAGCAACTCCAATGAACTAAATTTGAATAGTAGAGGTTTCATATTCGCGTGCTTATTTCTTGCGAAGGGATGCTTATGTTATTACGGAGTACATTATATCCTTTGATTAATTCTATCTTTGTTTGTTTACTGACATTGGTTTTGAATTCGCTTTTGGATTAAGCTGTGGAAGAGGTTTAGAGGGGAAGACAAACCCCCAGCTCATCTGGGTGCAAGCAGAGATTACAATGTAGATATGGTCCCAAAGGTGCGATAGTAACTTCCTGCCTAAAATTATCTTTGTTCTACTTTTAGTAGCAGATAACGAATGTGGCAATGAGGTATCGTATTGTGGTGGTGTCATGACATCATAAACAGAACCCTATTATGGCGCATAGGTTTATCTTGAAACCTTTAGATCTTTTTGTATTATATAGATGTGTTGGTTCGCTGATTTGGAAACTATGTAAATCTCATTTATAGATACTCAGATGGAAAATATCGTCTATGACTTTTGTTGATTGTCATGGGTGGATGGTTTATTACAAGTGGATACTACTATGACTCCATGAATAACATACTGATGTTGCTTGTTGCTTGATTATCTAAAGTTCTTTTGTTTGGGCAGTTTATGATGGCAAATGGCACATTGGTAAGGACCCTGATTCACACTGATGTGACAAAGTATTTGTCATTCAAAGCTGTTGATGGGAGCTACGTCTTCAGCAAAGGGAAGGTAACATCTTCAGCTTATGTTAGTCTTTTAATAGCATCATATTTCCGATAGTGTTTTCTCTAAGTGGTTGTTAGATCTATATTCTGGTGATCTGTTCTTATTCCTATTAACATACCCTTTTCTATTTTCATTGTCAATCAGATTCACAAGGTACCTGCTACTGACATGGAGGCTCTGAAGTCCCCTTTGATGGGCCTTTTTGAGAAACGCAGAGCAAGAAACTTCTTCATTTACGTCCAAGATTATGATGAAGCTGATCCAAAAACACATCAAGGGTTGGATCTTACTACAATGACAACTAGAGAACTGATAGCGTGAGTACATCAGTGCTTGCTTCTCATTAGTGCACACCTTCTGTTTCTAAAGGAAACAACAAATTTGGAACATGCCCATTATCTTTATATGGGAGGTATTGTTGTAATATTGTAGACTTATACATGAACTAACGCGTACATGAAATGTCAAACATCATGTGGGCATCAATCCATACGTGAAACCAAGTTCATTTGAAGGAAAAAAAAAAGCACTCTTGAATATATCAGATGTCTGGCTAATAGTCAATAGCAAAGAGAACATCCATAGCTCCATCTGTCCATTGAGTAGAACTGTAGAAGGGTCTGATAGATGGAATTTTGCATGGAATACAAACGTGGCATGTGGCAGTCTTCATGTACAAAGCAACAGCCCAAAACTTAGTTGCCACTAATGTATTGCTAAATTTAAAATAACTGTTGATACGGCTGAAAGATTTCTTTGGATGAAACTACCTTGGTAATAAAAACCAAAGTAGTTACATTGTTGAACCATGCAACAGATTTGTGTTTATCTGCTGTGTGCTGTGGTACTGCATTACAAGCCTCCTTGGTGCTGCTTATGCAATGTAGAAACCTGAATATCTCTTTCAGGGAAAGTGAAAAATGAAAGCATAGGTGTTGGGGTGGGTTGGAGGTATCTAGGTTATGGCACCAATATAGTTATTACTGGAAAACTTCAATTTGCCGTATTTTTAGTTTGTTCCATATTTGCGTCTTGCCTAATGCAGGCCCACCTAAATATAGATTACCTTCTTTTGTATCTTTTGTAACTTATAAGAAGATTACTTCCTGATGGATATTCTTGTTGTCTTCTAGTGATTGTGTTCCAATAAAAAGGCATTATTTTATGAAAATAGCAGATAAATTTTCTTCCTCACAATATATAATTGATTTGCCTTCAACCTTAGACATGTTGCAAAAGGTTATACCTGTGCTTATTGTTACATTTTATTTGAACATAAGTGACTCTGTTTCCATGTGTCTTCTTTTCCAGAAAATATGGTTTAAGTGACGATACTGTGGATTTCATCGGCCATGCACTTGCTCTTCATAGAGATGATCGTTACCTAAATGAACCAGCAATTGATACTGTAAAAAGGATGAAAGTAAGTCTTGTTTGTAGTTTGCTGTTATCAGTATCCTCTGCTCATATCCTACCATTCCATTTTCATCTCTTAAACACCTTCAGGCTGCATTAGTTAGCCATAATTCATTTCCCGGTTACTACTTACTAGTGTTCCTCTTTTAGCTGTGTCACTGCTGTTTTGTGAATATTCTTTCTTTATGGAGTTCAGTTACATTTATTGGTTATCTTCTGTTCTTGTAGTTATATGCAGAGTCCCTTGCACGCTTTCAAGGAGGTTCACCTTATATTTATCCACTGTACGGTCTGGGTGAGCTGCCACAGGTTAGTCAATTTGTGTTAATTTAAATACATGTCATATTGCATGCGCATGTGTTTTAAGATGGTCATCTGTAATGCTTATTCCACAGGGTTTTGCTCGCCTGAGTGCTGTTTATGGTGGCACTTATATGTTAAATAAGCCAGACTGCAAGGTGCGATTATCATCAACCCAATCATGACTTGCATCATCTGGGTGACAGCCAAATAAAATTTCTTTTGGCATGTCTTTTTAGGTTGAATTTGATATGGAAGGGAAAGTCTGCGGCGTTACATCAGAAGGAGAAACTGCAAAATGCAAGAAAGTTGTTTGTGACCCTTCCTACTTACCCAACAAGGTTAATTTTCTTTCCTGTATTCAGCACAGGATTGTTCTTTTAATATGTTCTTCTGGGATATTTAAATGTCATATTCCATCTCAAGATATTCACAATTGAACTTACTGTGTTTTTCTTCTGCCCTTCCATTTGTTGATAAGTTTTATTAACTGCAACCTCATTTGATGTTCTGCTTACGCTTATTAACAGGTTAGGAAGATAGGAAAAGTTGCACGCGCTATTGCTATTATGAGCCACCCGATTGCAAACACAAATGACTCGCACTCAGTCCAGATTATTTTGCCACAGAAACAACTTGGACGCAAGTCAGACATGTGAGGCCTTTCGCAATCTCAATCACTTCTCATCAGATGAATTACTAGATTTGCTTGCCCAGTGCTTTTAATAAGTTATTCTATCCCCATTTACGGAATTTCTATTGGTATTCTCCTGTTAGGTATGTCTTCGGTTGCTCATACACACACAATGTTGCTCCAAAAGGGAAGTTCATTGCATTTGTGTCTACAGAAGCAGAGACTGACCATCCAGAGTCTGAGCTAAAGCCTGGGATTGATCTACTTGGTCAAGTAGATGAGCTATTCTTTGATATCTATGATAGATATGAACCCGTGAATGAGCCATCTCTTGATAACTGTTTTGTCTCAACTGTAAGTTCTACGGTGTATGATTTTGCACTTGAACATTAAGTTTGGTTGTGTTGGAGTATAATAGTATAAACATCTCTGGTTGTTATTCTCTCTGCAGAGCTATGATGCCACCACACATTTTGAGACAACGGTGACAGACGTTCTTAATATGTATACACTGATCACTGGAAAGGTAAGACACGCTTCTTTTCTCCATTTACTTTAATAAATGTAATGCTTCTGTCTAGCAGTTCAAGCTATTAACCACTGATAATACTTTATATATTTTGTTATAAACACCTTTTCTGGAAGAGTATGGAAAACTAATATCTGTAGGCTATAGAGATTAGATTACCACATTTTCTAAAATAGATCGACCTTTATGTTATCTTCTTAATTACTAAATACATATCTATTCGATTGGCTATTCTGTTGCACAATTATGTATTTTGTCCTTTCTTTCCTAATTCTTCTCTGCTTGCAGACTGTTGATCTCAGTGTCGATTTGAGTGCTGCCAGTGCTGCTGAAGAATATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019885