BGIOSGA019904

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Revision as of 02:59, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019904| Description = Japonica Group Os05g0426000 (Os05g0426000) mRNA,| Definition = Oryza sativa Indica Group BGIOSGA019904, complete gene....")
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Gene Name

BGIOSGA019904

Description

Japonica Group Os05g0426000 (Os05g0426000) mRNA,

Definition

Oryza sativa Indica Group BGIOSGA019904, complete gene.

LocusTag

NM_001062134.1

Ensembl Transcript ID

BGIOSGA019904-TA

Ensembl Protein ID

BGIOSGA019904-PA

Length

3182

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22120021..22123202

Sequence Coding Region

22120021..22120057,22120184..22120220,22120870..22120965,22122261..22122543,22122780..22122899
,22122990..22123202

Genome Context

<gbrowseImage1> name=IndicaChromosome05:22120021..22123202 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:22120021..22123202 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGATTTGGCGAAGTTCTTGTTTGGAGTTTCTGGCAATGTCATCGCGCTCTTCCTCTTCTTATCCCCAGTGCCTACTTTCTGGAGGATCATTCGGAGGAAATCAACAGAGGATTTCTCTGGGGTGCCATACAACATGACACTCATCAACTGCCTCCTCTCTGCATGGTACGGGCTGCCGTTCGTGTCCCCAAACAACATCCTGGTGTCGACGATCAACGGCGCCGGCGCGGTGATCGAGACGGCGTACGTGGTGGTGTTCCTCGTGTTCGCCTCCACCCACAAGACGCGGCTGCGCACGCTCGGCCTCGCCGCGGCCGTCGCGTCGGTGTTCGCGGCGGTGGCGCTCGTCTCCCTCCTCGCCCTCCACGGCCAGCACCGCAAGCTCCTCTGCGGCGTCGCCGCCACCGTCTGCTCCATCTGCATGTACGCCTCCCCCCTCTCCATCATGAGGCTGGTGATCAAGACGAAGAGCGTGGAGTACATGCCGTTCCTGCTGTCGCTGGCCGTGTTCCTGTGCGGCACGTCGTGGTTCATCTACGGCTTGCTCGGCCGCGACCCCTTCGTCACGATTCCGAACGGGTGCGGGAGCTTTCTTGGCGCCGTGCAGCTGGTGCTCTACGCCATCTACCGCAACAACAAGGGCGCCGGCGGCGGCAGCGGCGGCAAGCAGGCCGGCGACGACGACGTGGAGATGGCCGAGGGGAGGAACAACAAGGTCGCCGACGGCGGCGCCGCCGAAGACGACTCGACGGCCGGCGGCAAGGCGGGCACCGAAGTGTAG</cdnaseq>

Protein Sequence

<aaseq>MEDLAKFLFGVSGNVIALFLFLSPVPTFWRIIRRKSTEDFSGVPYNMTLINCLLSAWYGLPFVSPNNILVSTINGAGAVIETAYVVVFLVFASTHKTRLRTLGLAAAVASVFAAVALVSLLALHGQHRKLLCGVAATVCSICMYASPLSIMRLVIKTKSVEYMPFLLSLAVFLCGTSWFIYGLLGRDPFVTIPNGCGSFLGAVQLVLYAIYRNNKGAGGGSGGKQAGDDDVEMAEGRNNKVADGGAAEDDSTAGGKAGTEV</aaseq>

Gene Sequence

<dnaseqindica>1..37#164..200#850..945#2241..2523#2760..2879#2970..3182#ATGGAGGATTTGGCGAAGTTCTTGTTTGGAGTTTCTGGTGAGTGTTACTCAGTACTCTAGCTTGATTATATTGGTTCCTGTGAATTTTGTTAGGTTATAAGAAGTATTTGGTGAGTGTTCTTGTTGGCTTTCTTCAGCTTACTGGTTGGTTTTGTTCTTTCAGGCAATGTCATCGCGCTCTTCCTCTTCTTATCCCCAGTGTAAGTATCAAAGGTTGATGCATCTCACTGTCTCTCTTTTGGACTGGTAGCTGTTATATTTATAAAGAGAGGGTCAAAGATGATAAGAAAAGTGGTGCCATAAATTTAGTGAGCTCGCCAAACATAGGGTTTCCGAAGTGGATCTTTTTCTCTGAAATTATGAAGTGTAATTGTAGCTAGATCCAGATACATAAACCCACATGATGTCATGAATGACATGCACAGCTTGTCTCGTAAGAAAGAGCTAGAATTCAAGGGGAGAGCTAGAATTCAAGGGGATCCATGCATCTGTTTTTACCTCGTAATAGTATATTTGGCCGTGTACATCCAGCAATTTTCTTCATCAGTTCTTTCTATATCCTCATAATTAATAGCATCTGTTTTTAGATGTAGAGGCCAGTATTTTTTTTAAAAAAAACCATATAGTGTTCCAGCAATTTAAACTAGAAACTTCCGGCATACACTGTACTTTGCCACCATCAATTCCAAACAAGTCATGTTCTTTGTCCGGTTCTGAAATTATTTTTCTTGAAAAAAAATGTTTTAATTTTACTGTTGCTGGTTGCTGTCTTGCATTGAACAGAGGTATTACTACTGCTAGCATCTAATGAATTTGTGAACCAAAAAAACACACTTGTTTTTTTCACAGGCCTACTTTCTGGAGGATCATTCGGAGGAAATCAACAGAGGATTTCTCTGGGGTGCCATACAACATGACACTCATCAACTGCCTCCTCTCTGCATGGTAATCTTCTCAAAATATTCACAATAACCAAGTAACCGACATAACCTACAGTACAAGCTTAGCTACATGCCTCCTCGTATAAATGAACGATACAATGTTTTGGAAACGATTCTAGGTTGGTCGGTAATTTTCGTATTTACAATTTACTAACTATTTAATGGTTTGCAATATGTACGCCACTAAAATAAATATGGCTATAAATGGTCAAAAATGTTACTATTCCAACATAAATGATACTTGTTCGGTCAAGAATTTTCGGTACCATTTTCAACCCTACCTCCATGCCTTTGTGAAGCATATAATCCAAAATTGATGAGATGGCATAATATTACAATCTGCTTAGAAGGATAGGACCTGGTAGAAAAAGTAGTATTTCTTCCGCCCCAAAATATAACAATTTTGAGCACTCAGGATTTATCCTAAAATATAATAACTTCACCAACGTTTTCTTCCCAACCAACCATCACCCTTCAGCAATCACTTTTCGCACTTACCTACACTTGTCAACCAATGACAATTTAATAGTTGTATCTATTTTCTTAATAACCGTGTCCAACTCTAAAATTTTTTATTATTTGGGACGGAGTGAGTACAAATTACCTGCTGGAAGGGCATAATCTATATATGAGGAATTTTGAAAAGGAAAAGAGAGTTAAACTAATTAGCATGAATATTCTATTTAAATAATTGTATTTTAAACGAAACTGGATAGACTAGTACATTATGGTTCATCCTTATTCCCATGTCACCTCAAATTGATTTCTGTCCTGGCACTATGCCGTCAGAAAAAAGAATATCCCTATTTCTCTACAGTTACAAAAACAGTTTAATTTCCGCGGTAGAAAAAAAAACTTGCAAAATTTGAAGCGTCCTTTAAAAGGAATTATGTCAGAATGGACCGAAAATAACCAGAAATTTACGATCCATCTAAACACACTTTTAAACCTAGTCAAAAACGTAATAAACATGGGACCATCTATACATTTGTCGATAAATTTTCTTCTAAAAATTTTACATATGTAATTATAGTACAATCATAGTGTAATTACACTGTAACTTATAGGTATCGAGCCGATCACATCTTAACAGGCCCTAAATAACAACACGACACACACGGTCAGGTTAGAAATTTCAGTCCGAAATTTCGTAACCCCCACCCCGGCACGATACTATATAAATTCAGTCAAAAATTACTATTTAGTTTGATTTCAAACAAATTCGCTCCGAAAATTTGGCAGAAGATTAAACCCTGCACACGGTTTAACGCTGCCGATGCCTTGTGTTGAATTGCGAAGGTACGGGCTGCCGTTCGTGTCCCCAAACAACATCCTGGTGTCGACGATCAACGGCGCCGGCGCGGTGATCGAGACGGCGTACGTGGTGGTGTTCCTCGTGTTCGCCTCCACCCACAAGACGCGGCTGCGCACGCTCGGCCTCGCCGCGGCCGTCGCGTCGGTGTTCGCGGCGGTGGCGCTCGTCTCCCTCCTCGCCCTCCACGGCCAGCACCGCAAGCTCCTCTGCGGCGTCGCCGCCACCGTCTGCTCCATCTGCATGTACGCCTCCCCCCTCTCCATCATGGTACGTGCCTGCCATTCTCGGTTTCATGGATTGGATTTTTTTCAAAGAAAAATAGTTTTAATTATACGACGCAATCAGCCAAACCGGCTTATGTTAAGGGAACGGGGAAAAACTTAAACTAAAACTTAAGAAGAACTACGGTGGCTAAACTCAACTCCTAACAGCGGAAACTTCTTGGATTGGATTTCGTGGCGATTACTCGCTTGTTGATTGGTTTTCATGGTGAATCGATACAGAGGCTGGTGATCAAGACGAAGAGCGTGGAGTACATGCCGTTCCTGCTGTCGCTGGCCGTGTTCCTGTGCGGCACGTCGTGGTTCATCTACGGCTTGCTCGGCCGCGACCCCTTCGTCACGGTGCGTGTCGTGCCACCGGCCGCCGGCGCCCGCGTGCAGCTCAAACAGTTGATTGATTTGATTGGTGTTCGATCGTTTTTGTTTGGACAGATTCCGAACGGGTGCGGGAGCTTTCTTGGCGCCGTGCAGCTGGTGCTCTACGCCATCTACCGCAACAACAAGGGCGCCGGCGGCGGCAGCGGCGGCAAGCAGGCCGGCGACGACGACGTGGAGATGGCCGAGGGGAGGAACAACAAGGTCGCCGACGGCGGCGCCGCCGAAGACGACTCGACGGCCGGCGGCAAGGCGGGCACCGAAGTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019904