BGIOSGA019918

From RiceWiki
Revision as of 03:00, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019918| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019918, complete gene.| tag = OJ1378_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019918

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019918, complete gene.

LocusTag

OJ1378_A04.10

Ensembl Transcript ID

BGIOSGA019918-TA

Ensembl Protein ID

BGIOSGA019918-PA

Length

2401

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22553329..22555729

Sequence Coding Region

22553329..22554369,22555214..22555417,22555502..22555729

Genome Context

<gbrowseImage1> name=IndicaChromosome05:22553329..22555729 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:22553329..22555729 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGGCGAGCTCGATCCGGCCGCCACGCGCAGCGCTAGTCCTCCTCCTGCTCGCGCTGTCCTTCTCCCTCACCCTCGCCGCCCACTTCGAGGGCTTTGGCTCCGACGACCTCCACTCCGCCCACGCCGACGCGGCCTCGGCAGACGACGAAGACGACGAGGGGCTCGACGTCGAGCTCCCGCCGCCGCCGCGCATCTCCCTCTCCACTTCAACTCCTTCCCCTCCCGTCACCACCACCACCACCACCACCTCCGCTCCAAACCCTAACCCCGATCCCAACCCGACGCTGACCCCGCCGAACCCCACCCCGACGCTCGATCTCTGGGACGAGGACGAGTTCGAGGGCATCCCTGTCCCGGAAGCGGCCTCCTCCGACGAATCCTCCACGCCGGCGGAAGCCGCCCCGTCAGATCCCGCGGCCGATGCCGCGGCCGAGGCGGCGCCGGCCCCGCCCCGGCGGCCCGCGGAGCTGCTCCGCGCGTACACCGTCGAGATCGCGTGCGTCAGCTTCCTGATCTGCTTCCTGCTCAACTACTTCACCGGGAAGCGGCAGAACGAGGCGATCGCGCTCGCCTGGGCCACCAGGTTCGCCACCAGGGACTCCATCTTCGACAAGAATTTCAGCCTCCTCGGCACCGGCGACGGCAAGGACACGCCGCTCCTGATGAAGGAAGGGCAGGACGTGTTCAAGTTCTACGCGAGCGGGAGGCGGTACTGCCAGGGGATGCTCGCCACCATGGAGATGCGCGCGCGGCACGACCTGCTGTCCAAGCTGGTGGAGCTGGTGTTCCCCAGGAAGGACACCATCACGTTCGAGGTGGTGATGAACGAGGAAGCCATGGACCACGTCATGTTGGCCGTGGCGAGGAAGAAGGCGGCCAAGACGATGCAGAAGGAGGAGAGGGATCTGCAGAAATTTGCCGGGGTTCTGACCTCGGCACCCGCCGGGAGGAGATGGGTTGCGGATGAGCTTGCGGTAGTGGCCGAGTCAAAGGAGGTTGCTGGGGATATGATTACTGAAGCCGTGCTGGACCAGGTCCTTGGTGACAAAGCTTTTGAGAAATTTGGGAAATGGTTCATCTCACTTCATTTTTCAGATCAACTGGCAGGCTCTTACAAGAAAGTCCTTTCTTTCAAGTTTGTACTGCCAGATGCAAGCAACATGGCTGAGATGACAAGATTAGTTGCTCTCGTGCCATACTACATTGATTTGGTGGGGCGTTACAAGCTCAGCAACCATGCTCGTTCCAAAACTGAAGCTGCAAGAACAAAAGCTGCCCAGGAGGCTTTCAGGGAGCAACAGGGTCTAAGGCAGGAAGCCCTTCAAAGGAAGAAGGCTGAGAAGAAAAAACTTATGGAAGAGGCAGAGGCCAAATTGAGCGCCGAGGCACTCCGCAAGAAAGAGGAAAAAGAAAGGGCTCGTCAGATGAAGAAGTCCATGCCCAAAGTTAAAATGCTCCGTTCCTAG</cdnaseq>

Protein Sequence

<aaseq>MATASSIRPPRAALVLLLLALSFSLTLAAHFEGFGSDDLHSAHADAASADDEDDEGLDVELPPPPRISLSTSTPSPPVTTTTTTTSAPNPNPDPNPTLTPPNPTPTLDLWDEDEFEGIPVPEAASSDESSTPAEAAPSDPAADAAAEAAPAPPRRPAELLRAYTVEIACVSFLICFLLNYFTGKRQNEAIALAWATRFATRDSIFDKNFSLLGTGDGKDTPLLMKEGQDVFKFYASGRRYCQGMLATMEMRARHDLLSKLVELVFPRKDTITFEVVMNEEAMDHVMLAVARKKAAKTMQKEERDLQKFAGVLTSAPAGRRWVADELAVVAESKEVAGDMITEAVLDQVLGDKAFEKFGKWFISLHFSDQLAGSYKKVLSFKFVLPDASNMAEMTRLVALVPYYIDLVGRYKLSNHARSKTEAARTKAAQEAFREQQGLRQEALQRKKAEKKKLMEEAEAKLSAEALRKKEEKERARQMKKSMPKVKMLRS</aaseq>

Gene Sequence

<dnaseqindica>1..1041#1886..2089#2174..2401#ATGGCGACGGCGAGCTCGATCCGGCCGCCACGCGCAGCGCTAGTCCTCCTCCTGCTCGCGCTGTCCTTCTCCCTCACCCTCGCCGCCCACTTCGAGGGCTTTGGCTCCGACGACCTCCACTCCGCCCACGCCGACGCGGCCTCGGCAGACGACGAAGACGACGAGGGGCTCGACGTCGAGCTCCCGCCGCCGCCGCGCATCTCCCTCTCCACTTCAACTCCTTCCCCTCCCGTCACCACCACCACCACCACCACCTCCGCTCCAAACCCTAACCCCGATCCCAACCCGACGCTGACCCCGCCGAACCCCACCCCGACGCTCGATCTCTGGGACGAGGACGAGTTCGAGGGCATCCCTGTCCCGGAAGCGGCCTCCTCCGACGAATCCTCCACGCCGGCGGAAGCCGCCCCGTCAGATCCCGCGGCCGATGCCGCGGCCGAGGCGGCGCCGGCCCCGCCCCGGCGGCCCGCGGAGCTGCTCCGCGCGTACACCGTCGAGATCGCGTGCGTCAGCTTCCTGATCTGCTTCCTGCTCAACTACTTCACCGGGAAGCGGCAGAACGAGGCGATCGCGCTCGCCTGGGCCACCAGGTTCGCCACCAGGGACTCCATCTTCGACAAGAATTTCAGCCTCCTCGGCACCGGCGACGGCAAGGACACGCCGCTCCTGATGAAGGAAGGGCAGGACGTGTTCAAGTTCTACGCGAGCGGGAGGCGGTACTGCCAGGGGATGCTCGCCACCATGGAGATGCGCGCGCGGCACGACCTGCTGTCCAAGCTGGTGGAGCTGGTGTTCCCCAGGAAGGACACCATCACGTTCGAGGTGGTGATGAACGAGGAAGCCATGGACCACGTCATGTTGGCCGTGGCGAGGAAGAAGGCGGCCAAGACGATGCAGAAGGAGGAGAGGGATCTGCAGAAATTTGCCGGGGTTCTGACCTCGGCACCCGCCGGGAGGAGATGGGTTGCGGATGAGCTTGCGGTAGTGGCCGAGTCAAAGGAGGTTGCTGGGGATATGATTACTGAAGCCGTGCTGGACCAGGTGATGATTTAACCTGCTTACTTATTTTTAGAATTGCTGTTTTTAGCTTCGGTGGTACTGGGTAAATGGTTCTTCTGGTAAGATTGTACAGATGATATAGTGAGGTGTCCTGTTGATGTTGATTCTTTTATGAAAGTAATATAGGTAAGTGCCTTCTAAAACGAAACGGTATATATTACAAATTATCATCAAATAATTTGGAAGTGAGAAAGGTGCAATATTCGACATTCGAGAAACATCTCACTCCCTTCAATTATATCATTAATCACTAACTTCAATATGGATGAAGTGTAAAGGAATTAAATTGTGAATTGATCTGAGTTTCTTACTTTTTGGGTGAATTGGCACCAATTGGATTCTATTATGTTCATAACTATTCTTGTACCAAGATTTTCCCAGAATAGTAACTGTGGATCAAGTAATGTGATGATGGCTTGTATTATCATTTCATTATGTTTGTAATTTAATAATATCATCAGGCTTTTGCATAAGGCAGTGTTGATATTGAACATGCCATATTTGTCTTGGGAAAGTCAGGGTACTGTTCCTAGCTGTTGATGTTTTGCACATTTGGATAGTGAAGAACTTAGGGAGTACCTTGAATTTTTGACTGCTAGAGTTCTACCAAAGTCGCCATCTATATCTTTTTTAACGACTGAAGTAGCCTGTCTTAATGCTATGATAAAGAAAATTACATGGAAGGTTTAGTAATTAAGGATTGACATAGCTTTGCTCAGAATTTTGTCATGGGCTGGCTCAATATGATCCGCATGTCTTTAGTAAGACTGAGCAATGCTATACAGTGGCATACATATATAATGTTTTACAACCTGTTTCTCTGCAGGTCCTTGGTGACAAAGCTTTTGAGAAATTTGGGAAATGGTTCATCTCACTTCATTTTTCAGATCAACTGGCAGGCTCTTACAAGAAAGTCCTTTCTTTCAAGTTTGTACTGCCAGATGCAAGCAACATGGCTGAGATGACAAGATTAGTTGCTCTCGTGCCATACTACATTGATTTGGTGGGGCGTTACAAGCTCAGCAACCATGTGAGTATCTCCTCTATCTTTGTTTTAGGCCACAACCATTTTTCGGTTACAGTGTCTAATTCTTCTTATTCATGGTAATTGCAGGCTCGTTCCAAAACTGAAGCTGCAAGAACAAAAGCTGCCCAGGAGGCTTTCAGGGAGCAACAGGGTCTAAGGCAGGAAGCCCTTCAAAGGAAGAAGGCTGAGAAGAAAAAACTTATGGAAGAGGCAGAGGCCAAATTGAGCGCCGAGGCACTCCGCAAGAAAGAGGAAAAAGAAAGGGCTCGTCAGATGAAGAAGTCCATGCCCAAAGTTAAAATGCTCCGTTCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019918