BGIOSGA019929

From RiceWiki
Revision as of 03:00, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019929| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019929, complete gene.| tag = OJ1058_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019929

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019929, complete gene.

LocusTag

OJ1058_F05.4

Ensembl Transcript ID

BGIOSGA019929-TA

Ensembl Protein ID

BGIOSGA019929-PA

Length

3413

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22705953..22709365

Sequence Coding Region

22705953..22706072,22707067..22707119,22707214..22707323,22707808..22707975,22708267..22708364
,22709004..22709130,22709259..22709365

Genome Context

<gbrowseImage1> name=IndicaChromosome05:22705953..22709365 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:22705953..22709365 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGTGGACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCAAGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGCCTTGGGTTTTTGACTTCCTTGCTATTCATATTCCTAGTTGGAATATTTGTTTCTTCATGGGTGGGTTCAACTGTCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCACATATATTCTGCATCGAAGCAAGTTAGCACTGCTGTTTCACCAGATCAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGTCATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGACTGACAAAGGTGATGAAGAACTGTGCAGTGTATATGTGCCAACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCGAATTTGTCCATTCGAGAAGGGATAGAAATCATTGTTTCTGGAGGAATGACCATGCCGCAGGTGATTGCAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGA</cdnaseq>

Protein Sequence

<aaseq>MPEEKEYAPVPLGQAPEAVDPEDPVKSPPRPTSPANSTRKACFAVLQSWVSRKFMTGCVVLFPVAVTFFITWWFVKFVDGFFSPLYAKLGFDIFGLGFLTSLLFIFLVGIFVSSWVGSTVFWIGEWFIKKMPFVRHIYSASKQVSTAVSPDQNTTAFKEVAIISHPRIGEYAFGFITSTMILQTDKGDEELCSVYVPTNHLYIGDIFLVRSEEIIRPNLSIREGIEIIVSGGMTMPQVIAAPGQTPHKGQSTRLNRMMSA</aaseq>

Gene Sequence

<dnaseqindica>1..120#1115..1167#1262..1371#1856..2023#2315..2412#3052..3178#3307..3413#ATGCCGGAGGAGAAGGAGTACGCGCCCGTGCCCCTCGGCCAGGCGCCGGAGGCGGTGGACCCCGAGGACCCGGTCAAGTCGCCGCCGCGGCCCACCTCGCCGGCGAACTCCACCCGCAAGGTCTAGATCGGTCTTACCCTTCCTTCTGCCCTCTTACCCCTTCCTTCCTCCCGGACGGATTAAAGTATTAAACCCTAATGGTTGCTTGGATCTGGCCGCCGCGCGCCTGTGCTCCTGCTGCGTTTTGATTTTTGATGTCCAGTCTTCTGCTACTTAGCTGTTTGGATTGGACCGTTGACCTGGCCCTCGCGTTCTGTGGCTTGATGGGATGAACATGGCACATAATGCGTTGATGCGCGTGTTTTATGCATGGATTTTTATGTGCTTCAAAACACTTCCTGATGATGATGATGATGCTTACATAGATTTCGACATAGTATTGGATAAAATGTAAATTCTGACTGTTGTAAAAATTAGGTACGAAACACAAACAAGAGGATTTAAATTCTCGAGTGTTGATGTTGGATAGTTTGTACATTAGTGTGTAGGAGAGGAGTGCCCTCTTGCCGTGGACACATGGATTTAAAGTTTAGATGATTCTTGGGCTAACGGATCATCTGGGTTGCTGTATTGACCTATAGTTATTACTGCTTCTACACATTTGGGAATTGTCTACTTTAGAGCATGCCTTAAACACTTTCTTTTTGTCATAAGCAGGGATTGCGTATACTAACAGACCTAAAATCTTATGATGGAATATGTGTCTGACAGTACGAATTTGACAAATGGCACTAAATTTGCCCCTACACGTTGGTCCCTGAGTCAAACTATTATTCTAATGTTGACACTTCTGAAAAATCACATTTGAGAATTATTACTTGTTTAGTTTTGTATGCAGTCTGATCATGTTTTCCATCTTTGAAGGGTTATTTCTTATTTGATAAATATTAGATTCTGTTGACTTCACTGGGCAAATTAGACAACCTGGATCCAGAATTATTGTGTTAACAAATTTTCTGTTTTCACCCAAATGAGTTATACTTCTCCTGTCCATGCATGTGCTAAATTATCTTCAAAATAGTAGTTCTGTGCTTAACCTTGTATGATTAAACAGGCATGTTTTGCTGTTCTTCAAAGCTGGGTGTCAAGAAAATTTATGACAGGATGGTATGTTTTTTCAACAATTAATCTAGACATATCACAAGAGCTAAAGATTATATCCAAGCCTATTAACCTGTTTTATCCCTCTTTTGATTTGCAGCGTAGTTCTTTTCCCTGTTGCTGTTACATTCTTCATCACCTGGTGGTTTGTTAAGTTTGTTGATGGATTTTTCAGTCCACTGTATGCAAAGCTTGGATTTGATATATTTGGTAACTCTTGCAAAAATGCTTCTCTCTGGATATTTGTACTTATTATGGAAAAATACTATACTGTAATAGTTGAGAAATAACAGTCTGTATATTACTCTTTTTTTATATGTAATGCAGTTGTATATTAACATAATTAGACTAGGATGTTTTTTTTTCCTGCTGGATTTTTTTGTGTGTGTTTGATCTAGACTTGATCTCCAAATATTAACTTGGATTTGCAAATCTGGGTGCGAAATAATGTGGTTTAGGTGCTTTAGTCAGGTAATTTAGTTTATGATGCTTTATTTTTATTGGATACAATGTTGATCCTGAACTGCTGACAATGCCAATAACAAGACACTTTTAGCCATTCATCAGTATGTCGTGCAATAACAACATCAAGCTATAACTGGCAAAATTTCATGGTTTGTTCTGTGTGGAGTAATAAAAGTTATGTCTTGTATTAATATTTTGTTCATGACAAATGGTTATCACATCTTTTCAGGCCTTGGGTTTTTGACTTCCTTGCTATTCATATTCCTAGTTGGAATATTTGTTTCTTCATGGGTGGGTTCAACTGTCTTTTGGATTGGAGAATGGTTTATTAAGAAAATGCCTTTTGTAAGGCACATATATTCTGCATCGAAGCAAGTTAGCACTGCTGTTTCACCAGGTGATTCATACGTATATACAAATCTATGTGCTTTGAAATAGTCTACCCATGATATTTCTTTTTAACTCATTCATGTTTTTCACTTGGAGTGACACATTGACACTGTTTCTGAAACTCATAAATTATAGTTGCAAGTTGCAACACTATGTTTCTGCCCACTTCATGTCTTCATGTTGTGTTTTTGTAGGTATTGATAGGTTAATGTATCATTTTAATCATTATATTACAAGTTTCCAACTTTGTTGTAATTCATTTTCTCAACCAGAATTTTTTCTTATTTCTTATTGACAGATCAAAATACAACGGCATTTAAAGAAGTTGCAATAATTAGTCATCCCCGTATTGGTGAATATGCATTTGGATTCATAACATCGACGATGATCCTTCAGGTATTTGTTTATACATATCATGTGCTCTAGAATGAATAGAATCTTGATGGTTTCAGCCTACACCTGCCTAGATGATTACCTCCAGATGCCTCATTCATGTATAACTTCCTTGCTTAGCTTAGCTGACTCCGAGAAACTTTTTGAATGTTTTTAATTTGTTGATTTTCATAAGCATGTGTTCGGTTGCTCCTTTTCTGTGTTTCCTTGTTTCTAGAATAGTTCCCTCACTTTGAGGGAAGTGGCAACGATTAGTTATGTTCATCTGAGTCAAAATAATGGTCACAAGAAATTTTACAAAACCTTGCTTGGCCTTATCTTATTAGCTGACTATTGAACTTAGAGATTATACTAGAAGATAGCTTACTAAAGATTTGCTAGTAGACCTATGCAAGGCCAAACAGCAACACAAAGCAAACATTTGCAGTCGGAACAGTGAAACTGATGCCTTCGACTTTTTAGAAATTGGTGTACATTTTGATTTAGCAAGCAGCACAACAAATACTGTACTTGGTTACATATTAATTATATTACAGAGGCCCATATTTTGTTGCTCTGTGCAACTTCATAACGCCATTATTATCTATGATTGACACTTTTTTTCTGTGCGCTCTGAGATGATCATTTAATATTGCTTTACAGACTGACAAAGGTGATGAAGAACTGTGCAGTGTATATGTGCCAACCAATCATCTATATATCGGTGACATCTTCTTGGTTAGGTCTGAGGAGATTATAAGGCCGAATTTGTCCATTCGAGAAGGGATAGGTTGGTTCCTTTTCCAAATTTTGAAGTTACCGTTTGTGTGCTAGGTCTTTTCTCCTATCCAATTCAGTGTTTTATCCTAGTACATTTCTCTTATTCATCTAATCTTATGCTCTTTGTACTTTTTACAGAAATCATTGTTTCTGGAGGAATGACCATGCCGCAGGTGATTGCAGCACCAGGACAAACACCCCATAAGGGTCAGAGCACCCGTTTAAACAGAATGATGAGTGCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019929