Os11g0708900

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Revision as of 09:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0708900| Description = Similar to Phenylalanine ammonia-lyase (EC 4.3.1.5) (Fragment)| Version = NM_001075097.1 GI:115486842 GeneID:4351235|...")
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Gene Name

Os11g0708900

Description

Similar to Phenylalanine ammonia-lyase (EC 4.3.1.5) (Fragment)

Version

NM_001075097.1 GI:115486842 GeneID:4351235

Length

2255 bp

Definition

Oryza sativa Japonica Group Os11g0708900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:30821052..30823306

Sequence Coding Region

30821052..30821425,30821578..30823306

Expression

GEO Profiles:Os11g0708900

Genome Context

<gbrowseImage1> name=NC_008404:30821052..30823306 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:30821052..30823306 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtgtgagaccggtgtcaacggctcagggccgcgcggcagcgaccccttgtactggggcaaggcggcagagggtgttgcggggagccacctcgaggaggtgaagaggatggtggttgagtaccgcgcgccgctggtgaagatcgacggcgccatgctcagcgtcgccaaggtggcagccgtcgccggcgaggccgcccgggtgcaggtggtgctggacgaatccgcacgaccccgcctggaggctagccgcgagtgggttttcgaaagcaccatgaatggcaccgacacgtacggcgtcaccaccggcttcgggggtgccgcccaccgccgcaccaaggagttcgccgcgctccagaaagagctgatccgatacctcaacgccggcgtctttggagccagccgcagcgacggctacacgctgccgacggaggtcacgcgcgcagccatgctcgtgcgcatcaacaccctcacccagggctactcgggcatccgcttcgagatcctcgaggccatcgccaagctgctcaacgccaacgttacgccgtgcctgccgctccggggcaccatcaccgcgtccggcgacctggtccctctgtcctacatcgccggcctaatcaccggccgccacaactccgcggcggtggccccggacggcaccaaggtggacgccgccgaggcattcaggatggccggcatcgagcacgggttcttcgcgttgcagcccaaggaagggctcgccatcgtcaacggcacggccgtgggctccggcctcgcggcgatcgtgctcttcgaggccaacgtcctcgccgtccttgccgaggtcctctcggcggtgtactgcgaggtaatggccggcaatccggagtacaccgaccacctcatccacgcgctgaagcaccaccctggacagatcgaagctgcggccatcatggagcacatactggaaggcagctcctacatgaagaagcttgccaaggacaaggagcagggccagggcgagcttgaccggctgacgaagctgaagcaggacaggtacgccatccgcacggcgccgcagtggctcggcccgcaggtcgaggtcatccgcttcgccaccaagtccatcgagcgggagatcaactccgtcaacgacaacccggtcatcgacgtcgcccgccgcaaggcgctccacggcggcaacttccagggcactcccgtcggggtgtccatggacaacactcgtctcgccatcgctgccatcggcaggctcatgttctcgcagttctccgagctcgtcagtagcttctacagcaacggccttccctccaacctgtccggcgggcgcaacccgagcttggactacggtttcaatggcgccgaggtcgccatggcgtcctactgctctgagctccagttcctcgccaacccggtgaccaaccatgtgcagaccgcggagcagcacaaccagagcgtcaactctctcggcctcatctcctccaggatgactgcagaggccgtcaccatcctgaagctcatgtcctctactttcctcatcgcactgtgccaggccgtcgacctgcgccaactcgaggagagcatcaaggccgctgttaacaagtgcgtgacgaatgtcgccaagaaatccctgaccctggccatggacgacgacgaccatctgctagcgctgctcggcgctgctatcgaccgcgtggcggtgttcacgtacgcagaagacccatgcagatccagcttgccactcatgcagaagctccgcgcggtgctcatggagcatgcgctggccaataacggtgacatcctcctggccaaggtggctgagttcgagcagcagctccgcgcggtgctccccgacgaggtggaggccgcacgcgccgctgtagagagcggcacggccccgaacaggatctccgactgccgctcgtacccgctgtacaggttcgtgcgcaaggagctcggcgccgagtacctgaccggcgagaagacgcggtctcccggggaggaggtggacaaggtggtgatcgccatgaaccagcacaagcacatccatccactgctggagtgcctcagcgagtggaaaggcgcgcccctgccacttagctga</cdnaseq>

Protein Sequence

<aaseq>MECETGVNGSGPRGSDPLYWGKAAEGVAGSHLEEVKRMVVEYRA PLVKIDGAMLSVAKVAAVAGEAARVQVVLDESARPRLEASREWVFESTMNGTDTYGVT TGFGGAAHRRTKEFAALQKELIRYLNAGVFGASRSDGYTLPTEVTRAAMLVRINTLTQ GYSGIRFEILEAIAKLLNANVTPCLPLRGTITASGDLVPLSYIAGLITGRHNSAAVAP DGTKVDAAEAFRMAGIEHGFFALQPKEGLAIVNGTAVGSGLAAIVLFEANVLAVLAEV LSAVYCEVMAGNPEYTDHLIHALKHHPGQIEAAAIMEHILEGSSYMKKLAKDKEQGQG ELDRLTKLKQDRYAIRTAPQWLGPQVEVIRFATKSIEREINSVNDNPVIDVARRKALH GGNFQGTPVGVSMDNTRLAIAAIGRLMFSQFSELVSSFYSNGLPSNLSGGRNPSLDYG FNGAEVAMASYCSELQFLANPVTNHVQTAEQHNQSVNSLGLISSRMTAEAVTILKLMS STFLIALCQAVDLRQLEESIKAAVNKCVTNVAKKSLTLAMDDDDHLLALLGAAIDRVA VFTYAEDPCRSSLPLMQKLRAVLMEHALANNGDILLAKVAEFEQQLRAVLPDEVEAAR AAVESGTAPNRISDCRSYPLYRFVRKELGAEYLTGEKTRSPGEEVDKVVIAMNQHKHI HPLLECLSEWKGAPLPLS</aaseq>

Gene Sequence

<dnaseqindica>1..374#527..2255#atggagtgtgagaccggtgtcaacggctcagggccgcgcggcagcgaccccttgtactggggcaaggcggcagagggtgttgcggggagccacctcgaggaggtgaagaggatggtggttgagtaccgcgcgccgctggtgaagatcgacggcgccatgctcagcgtcgccaaggtggcagccgtcgccggcgaggccgcccgggtgcaggtggtgctggacgaatccgcacgaccccgcctggaggctagccgcgagtgggttttcgaaagcaccatgaatggcaccgacacgtacggcgtcaccaccggcttcgggggtgccgcccaccgccgcaccaaggagttcgccgcgctccagaaagagctgatccggtacgactttaattagctgtacactactagtatacttgagtattttattttatactactaattgctcactgtcacaagctatatataatgctagtaattaattcgttcattgggtgggtggttctgaatgaaaatcaaatacttcattaaagatacctcaacgccggcgtctttggagccagccgcagcgacggctacacgctgccgacggaggtcacgcgcgcagccatgctcgtgcgcatcaacaccctcacccagggctactcgggcatccgcttcgagatcctcgaggccatcgccaagctgctcaacgccaacgttacgccgtgcctgccgctccggggcaccatcaccgcgtccggcgacctggtccctctgtcctacatcgccggcctaatcaccggccgccacaactccgcggcggtggccccggacggcaccaaggtggacgccgccgaggcattcaggatggccggcatcgagcacgggttcttcgcgttgcagcccaaggaagggctcgccatcgtcaacggcacggccgtgggctccggcctcgcggcgatcgtgctcttcgaggccaacgtcctcgccgtccttgccgaggtcctctcggcggtgtactgcgaggtaatggccggcaatccggagtacaccgaccacctcatccacgcgctgaagcaccaccctggacagatcgaagctgcggccatcatggagcacatactggaaggcagctcctacatgaagaagcttgccaaggacaaggagcagggccagggcgagcttgaccggctgacgaagctgaagcaggacaggtacgccatccgcacggcgccgcagtggctcggcccgcaggtcgaggtcatccgcttcgccaccaagtccatcgagcgggagatcaactccgtcaacgacaacccggtcatcgacgtcgcccgccgcaaggcgctccacggcggcaacttccagggcactcccgtcggggtgtccatggacaacactcgtctcgccatcgctgccatcggcaggctcatgttctcgcagttctccgagctcgtcagtagcttctacagcaacggccttccctccaacctgtccggcgggcgcaacccgagcttggactacggtttcaatggcgccgaggtcgccatggcgtcctactgctctgagctccagttcctcgccaacccggtgaccaaccatgtgcagaccgcggagcagcacaaccagagcgtcaactctctcggcctcatctcctccaggatgactgcagaggccgtcaccatcctgaagctcatgtcctctactttcctcatcgcactgtgccaggccgtcgacctgcgccaactcgaggagagcatcaaggccgctgttaacaagtgcgtgacgaatgtcgccaagaaatccctgaccctggccatggacgacgacgaccatctgctagcgctgctcggcgctgctatcgaccgcgtggcggtgttcacgtacgcagaagacccatgcagatccagcttgccactcatgcagaagctccgcgcggtgctcatggagcatgcgctggccaataacggtgacatcctcctggccaaggtggctgagttcgagcagcagctccgcgcggtgctccccgacgaggtggaggccgcacgcgccgctgtagagagcggcacggccccgaacaggatctccgactgccgctcgtacccgctgtacaggttcgtgcgcaaggagctcggcgccgagtacctgaccggcgagaagacgcggtctcccggggaggaggtggacaaggtggtgatcgccatgaaccagcacaagcacatccatccactgctggagtgcctcagcgagtggaaaggcgcgcccctgccacttagctga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0708900, RefSeq:Os11g0708900