Os12g0100100

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Revision as of 10:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0100100| Description = Similar to ALY protein| Version = NM_001071762.1 GI:115486845 GeneID:4351236| Length = 2669 bp| Definition = Oryza ...")
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Gene Name

Os12g0100100

Description

Similar to ALY protein

Version

NM_001071762.1 GI:115486845 GeneID:4351236

Length

2669 bp

Definition

Oryza sativa Japonica Group Os12g0100100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1760..4428

Sequence Coding Region

1777..1935,2002..2109,2492..2560,2652..2836,3923..4088

Expression

GEO Profiles:Os12g0100100

Genome Context

<gbrowseImage1> name=NC_008405:1760..4428 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1760..4428 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggactcgctgctggacatgtccctcgacgacctcatcaccaacaagtacaagcgccgctcccgtccaggtccagcgccctctgcccgccgctcccactcccgcgccgccacccgctccgctgccgctccctatcacgccatcacctttcaggcgccgcccacggcctacgtccacccgacgcccgcggccaacgtcgagaccggcaccaagctctacatctccaacctcgactacgccgtctccaacgaggacatcaaggaactcttctctgaggttggcgatgtcaagcgttactctattaactatgacaggagtggaagatccaagggaactgcagaggttgtattttccagaaaatctgacgccctggctgctgttaagaggtacaacaatgtgcagctggatggcaaacctatgaaacttgagctcattggtataaatattgagccaccaccacctgctatttttggtttcgctgcaccagctggatacttcgattttcctcccaaaaggggtggaagaggatggcctcggggcaggggtggatttggtgggcgtggtcggggtcatgtgggtcgtgggcgagggaggggagaccgtggaagtcggaagatttctgctgaagacctggatgctgacttggacaagtaccatgcggaaggaatgcaaatgagctag</cdnaseq>

Protein Sequence

<aaseq>MAADSLLDMSLDDLITNKYKRRSRPGPAPSARRSHSRAATRSAA APYHAITFQAPPTAYVHPTPAANVETGTKLYISNLDYAVSNEDIKELFSEVGDVKRYS INYDRSGRSKGTAEVVFSRKSDALAAVKRYNNVQLDGKPMKLELIGINIEPPPPAIFG FAAPAGYFDFPPKRGGRGWPRGRGGFGGRGRGHVGRGRGRGDRGSRKISAEDLDADLD KYHAEGMQMS</aaseq>

Gene Sequence

<dnaseqindica>18..176#243..350#733..801#893..1077#2164..2329#gcaacaccatcaagaagatggcggcggactcgctgctggacatgtccctcgacgacctcatcaccaacaagtacaagcgccgctcccgtccaggtccagcgccctctgcccgccgctcccactcccgcgccgccacccgctccgctgccgctccctatcacgccatcacctttcaggtatagtttctctttctttttcttgatttctcgcctgacccaacgaccacgatctattcttcctaggcgccgcccacggcctacgtccacccgacgcccgcggccaacgtcgagaccggcaccaagctctacatctccaacctcgactacgccgtctccaacgaggacatcaaggtaccaccacccgctcctcctttttctttttcttttttccccaaaaaaaattactataatctcaactcaccgtacctggatagctgcattaaactcttattgaattgtcatctttatattcctcaattcccccatcttttcatttcaccaaaccaattttgcttattatttagggtacatccctacacacactcacaacttacccttttcttatggaaaggaaaaccacagctttcttcattattatactcttaagtccacctacaaagcctcagctttgtatctttccagacatttagagcactcattaacctttttcacaatttaattattgtctcattctcactaaattgctctacaatttgctgcttactttactcaggaactcttctctgaggttggcgatgtcaagcgttactctattaactatgacaggagtggaagatccaaggttccaaaccccacctttcttttttcttttacttaatatgtgtcactctttttatgttaaaatgctcattactcataccctgttttgccagggaactgcagaggttgtattttccagaaaatctgacgccctggctgctgttaagaggtacaacaatgtgcagctggatggcaaacctatgaaacttgagctcattggtataaatattgagccaccaccacctgctatttttggtttcgctgcaccagctggatacttcgattttcctcccaaaaggttagtagcttccatatacagcattgtttttctctccccatgaaacaattaactctcaaaattaactactaaggccttgtttggcacagctccagacagtagatttgaagtttgtatgataaattatagtggtttaaaattttaaaattcatccaaaatgtgaaaaaaaatgatttaactaaatgttatcaatgtaatcgtagatccatgaatttgtgaagctaggaatacccaacttctagaaatcttggatcctgagctgtgccaatgagggcctaagataaacctgctctgctttgtaggcatagtctgtagtagtacatagtttgattattacctgcacaaataagtaccagctgataatgtctgccagacagagcttccccggtcaccagtaaagtttgtacaatggggttctgacaagactgaacttcaaaagcggttcttcttggaaaatcttgccgtacttttgagacaaaatttgagtttatgccaagatctgatggaaatatagaaaattttagacgaagtagattctcctgggactcaaacttgtgagctcgcattcagcatgataccaccaatctgcgttagatcttgcaatatggtttgtttgttaaattactcaaactacctataaatcctgaagtaactagccaggtcttcttcttaggtagtcttgaattcaagataaccaaattttaccgaaactaggggatatttcgaaccttggatacagtgccactagactgccttaaaagtccaagcaggataggatcacctgagacatgtatcccttgtatttattaagaatcacctggaaaccttgtttcttgcctcaatgttacctgcagatagtatgccctggccctattacagtttctatcaaatgtggagtgagactgaacttgagtatatccaaataccattttaaactgtttacttttccagggaaccatttaaaattgttttgttatatgatattatgaatcaacagaatttgcactgtgtttttttaagcctagtttgtcaggaagattctgagtaaaacatgtccagtgctgaaattttcagtggacctggcaggggtggaagaggatggcctcggggcaggggtggatttggtgggcgtggtcggggtcatgtgggtcgtgggcgagggaggggagaccgtggaagtcggaagatttctgctgaagacctggatgctgacttggacaagtaccatgcggaaggaatgcaaatgagctagatgaccctcacgctttgttgccttgccttgattgcattaggtagagacagggggacaaactagtaggccttccttggtctccttgttagtattttgtagggatagatgcagaccaacatatgtatactttgtttagatggtgtcataattttgagcagggaatggctaagcttaacctggtaggtagaagctagctcataatatgtaacacggagggagcacaactttgaacttttatagctagtgttgaacttttagctagtgtgggactgtgggttgatggacacacaagcaaagcaagcatgcagcttggcagcctggcaagaggattgaattgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0100100, RefSeq:Os12g0100100