BGIOSGA020004

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Revision as of 03:01, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020004| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020004, complete gene.| tag = OS05G04...")
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Gene Name

BGIOSGA020004

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020004, complete gene.

LocusTag

OS05G0465800

Ensembl Transcript ID

BGIOSGA020004-TA

Ensembl Protein ID

BGIOSGA020004-PA

Length

4408

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24318378..24322785

Sequence Coding Region

24318378..24318678,24319486..24319648,24319725..24319773,24319867..24319980,24320053..24320475
,24320548..24320934,24321018..24321113,24321219..24321334,24321411..24321513
,24321633..24321721,24321827..24321977,24322058..24322207,24322298..24322426
,24322517..24322595,24322676..24322785

Genome Context

<gbrowseImage1> name=IndicaChromosome05:24318378..24322785 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:24318378..24322785 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGGGGACTACGTGGACGTGCCGCTGGGCGGCGGCGGGCAGAGCACGCTGCCGCCGGTGGCGCCGCTGAAGAAGCAGCCGTCGCGGCTGGCGTCCGGGATGAAGCGGCTGGCGTCCATGGTGCCCGACACGATGAAGCTGAAGCGGACGCACTCCAGCGCGCAGCCGGCGCTGCGCGGCCTGCGCTTCCTCGACAAGACGTCGGCGGGGAAGGACGGGTGGAAGAACGTCGAGAAGCGGTTCGACGAGATGAGCGCCGACGGACGCCTGCCCCAGGAGAGCTTCGCCAAATGCATCGGTATGGCGGATTCTAAGGAGTTTGCAAGCGAGGTGTTTGTGGCATTGGCGAGAAGGAGGAGCATCAAACCAGAAGATGGGATAACAAAGGAACAGCTGAAAGAATTTTGGGAGGAGTTGACTGATCAGAACTTTGATTCACGACTACGAATATTCTTTGACATGTGTGACAAGAATGGTGATGGGCAGCTTACAGAGGACGAGGTCAAAGAGGTTATTGTGTTGAGTGCCGCAGCAAACAAACTTGCCAAGTTGAAAAGCCATGCTGCAACCTACGCCTCACTGATCATGGAAGAGCTGGATCCTGATCATCGCGGTTACATTGAGATTTGGCAGCTGGAGACGCTACTCCGTGGTATGGTGACAGCCCAAGGGCCTCCAGAGAAGGTGAAGCTGGCTTCAGCAAGCCTTGCAAGGACAATGGTCCCTTCCAGTCACCGGAGTCCAATGCAGAGGCGTTTCAACAAGACTGTTGACTTCATCCATGAGAATTGGAAGAGGATATGGGTGCTCTCCTTGTGGGCGATCCTCAATATTGCATTATTCATGTACAAGTTTGTGCAGTACAGTAGGCGGGATGCATTTCAGGTGATGGGCTACTGTGTCTGCATAGCAAAGGGTGCTGCCGAAACACTCAAGCTGAACATGGCCGTTATACTCCTCCCGGTGTGCCGAAACACACTAACAAGGCTCCGATCAACAGCACTCAGCAAAGTCGTACCATTTGATGATAACATAAACTTCCACAAGGTTATCGCACTGACGATTGCAATTGGAGCGGCTACTCATACTCTTGCTCATGTAACCTGCGACTTCCCAAGATTGGTATCATGTCCAAGGGACAAGTTCGAGGCCACACTGGGGCCTTACTTCAACTATGTTCAACCAACATACTCATCGCTGGTTGCAAGCACTCCAGGGTGGACTGGCATCCTCATGATCTTGATAATGTCATTCTCGTTCACACTTGCGACACATTCGTTCAGGAGGAGCGTTGTGAAGCTTCCATCACCACTGCACCACCTTGCTGGTTTCAATGCCTTTTGGTACGCCCATCACCTACTGGTGATTGCATATATCCTCTTGGTGCTGCACTCCTACTTCATATTTCTCACCAAGCAGTGGTACAATCGAACGACGTGGATGTTCTTGGCAGTTCCAGTCCTCTTTTACTCCTGCGAGAGAACTATCAGAAGAGTTCGTGAGAGCAGTTATGGGGTGACCGTCATCAAGGCAGCAATTTACCCTGGAAATGTGCTCTCTATTCACATGAATAAACCATCAAGTTTCAAGTACAAAAGTGGGATGTATATGTTTGTAAAATGCCCAGATGTTTCGCCTTTTGAATGGCATCCCTTCTCCATAACTTCTGCACCTGGAGATGACTACTTGAGTGTTCATATCCGTACATTAGGTGACTGGACAACAGAACTTAGAAACCTATTTGGGAAGGCTTGTGAGGCACAAGTAAGTTCCAAGAAGGCTACACTTGCACGACTTGAAACCACTATCATAGCAGATGGTCTGAAAGAGGAGACTTGCTTTCCCAAAGTCTTTATAGATGGTCCTTTCGGCGCACCAGCTCAAAATTACAAGAAATATGACATTCTTTTGCTTATCGGGCTTGGAATTGGAGCAACGCCTTTCATCAGCATACTGAAGGATCTCCTGAACAACATAAAATCCAATGGAGATGTGCAAAGCACGCATGATGCTGAGTTAGGCTACACCTTTAAGAGCAATGGGCCAGGAAGAGCTTATTTCTACTGGGTCACCAGAGAGCAAGGTTCCTTTGAATGGTTTAAAGGCGTGATGAATGATGTTGCTGAAAGTGATCATGATAATGTAATAGAGATGCACAATTACCTGACAAGCGTGTATGAAGAAGGAGATGCAAGATCAGCTCTGATTGCCATGGTCCAATCACTTCAACATGCCAAAAATGGTGTGGATATCGTCTCTGGCAGCAAGATCCGGACACATTTTGCAAGGCCGAACTGGAGAAAGGTATTCTCAGATCTGGCCAATGCCCACCAGAACTCTCGTATAGGCGTTTTCTACTGTGGGTCTCCAACACTTACGAAAATGCTGAGGGATCTTTCACTAGAATTCAGCCAGACGACAACGACTCGGTTCCATTTCCACAAGGAGAACTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MAGDYVDVPLGGGGQSTLPPVAPLKKQPSRLASGMKRLASMVPDTMKLKRTHSSAQPALRGLRFLDKTSAGKDGWKNVEKRFDEMSADGRLPQESFAKCIGMADSKEFASEVFVALARRRSIKPEDGITKEQLKEFWEELTDQNFDSRLRIFFDMCDKNGDGQLTEDEVKEVIVLSAAANKLAKLKSHAATYASLIMEELDPDHRGYIEIWQLETLLRGMVTAQGPPEKVKLASASLARTMVPSSHRSPMQRRFNKTVDFIHENWKRIWVLSLWAILNIALFMYKFVQYSRRDAFQVMGYCVCIAKGAAETLKLNMAVILLPVCRNTLTRLRSTALSKVVPFDDNINFHKVIALTIAIGAATHTLAHVTCDFPRLVSCPRDKFEATLGPYFNYVQPTYSSLVASTPGWTGILMILIMSFSFTLATHSFRRSVVKLPSPLHHLAGFNAFWYAHHLLVIAYILLVLHSYFIFLTKQWYNRTTWMFLAVPVLFYSCERTIRRVRESSYGVTVIKAAIYPGNVLSIHMNKPSSFKYKSGMYMFVKCPDVSPFEWHPFSITSAPGDDYLSVHIRTLGDWTTELRNLFGKACEAQVSSKKATLARLETTIIADGLKEETCFPKVFIDGPFGAPAQNYKKYDILLLIGLGIGATPFISILKDLLNNIKSNGDVQSTHDAELGYTFKSNGPGRAYFYWVTREQGSFEWFKGVMNDVAESDHDNVIEMHNYLTSVYEEGDARSALIAMVQSLQHAKNGVDIVSGSKIRTHFARPNWRKVFSDLANAHQNSRIGVFYCGSPTLTKMLRDLSLEFSQTTTTRFHFHKENF</aaseq>

Gene Sequence

<dnaseqindica>1..301#1109..1271#1348..1396#1490..1603#1676..2098#2171..2557#2641..2736#2842..2957#3034..3136#3256..3344#3450..3600#3681..3830#3921..4049#4140..4218#4299..4408#ATGGCGGGGGACTACGTGGACGTGCCGCTGGGCGGCGGCGGGCAGAGCACGCTGCCGCCGGTGGCGCCGCTGAAGAAGCAGCCGTCGCGGCTGGCGTCCGGGATGAAGCGGCTGGCGTCCATGGTGCCCGACACGATGAAGCTGAAGCGGACGCACTCCAGCGCGCAGCCGGCGCTGCGCGGCCTGCGCTTCCTCGACAAGACGTCGGCGGGGAAGGACGGGTGGAAGAACGTCGAGAAGCGGTTCGACGAGATGAGCGCCGACGGACGCCTGCCCCAGGAGAGCTTCGCCAAATGCATCGGTGAGTGCTCCTGCACATGCCCCCATGGTGTTCTCCATCCTCCAAAGTGATTAGTGATTCACCACAGCATGAAAAGAGAGACGGTGAAATTGCATTGTTAGCAAGAACACATCGAAAATTGACAAGCTTTGTTTTCCCTGCAAAAAAAAAAGGGGGAAAATGTTGTCAAAGCTTTTGTGCATGTGATGGAAAAAGGGGAACAGTTAGTAGATGAGAAATTGGTACAGATCATTCCTAGCTCGTATGTCGATGGTGTTTGTCCAAAATTTCAGCCATTTCAAATGTTTAAGCAGCCAGCCTCCTCCTGCCATCCATGCATACATGTTTGCAGCACTTCTTTGATAAAGTATACATAATCATTCCTATTCACAATTTTATTTTAACAAAAAACGGAGGAAAGAAAATTGGAAAATTTAAGAGGATATAATTGGTCGACCACGGGTTGCACAAAGTTCAGGCTTTGGCCCCCCCAAATATAACTCGGAGACAATACTTACCACGTAGCAAGAATAGGATATACTTCCTCCGTTTCATAATGTAAGACTTTCAATCATTGCCCACATTTATATAGATGTTAATGAATCTAGACATATATATATGTGTGTGTGTATAGATTCATTAACATCTATATGAATATGGGCAATGCTAGAAAGTCTTACAATATGAAACGGAGGGAGTACTCGTGCTTACGACATTTTCTTTTAAAAGAAGTGTAGTCAGGTAAATAAATGACATCAGAATGGCAATAAATCCATCCTCTGTATATAAATTGAAGCTCTAAGCTTAGAATGCCTCTGCAACTTAAAGGTATGGCGGATTCTAAGGAGTTTGCAAGCGAGGTGTTTGTGGCATTGGCGAGAAGGAGGAGCATCAAACCAGAAGATGGGATAACAAAGGAACAGCTGAAAGAATTTTGGGAGGAGTTGACTGATCAGAACTTTGATTCACGACTACGAATATTCTTTGACATGTAAAGGTCTACCTTCCTTGTCTTCAATGGAAAAAACCTTATGACTTGCCCCTTGATGAGATTGCTTTGCAATCAGGTGTGACAAGAATGGTGATGGGCAGCTTACAGAGGACGAGGTCAAAGAGGTCAGTTCCCAATCATCTCTGAATTTACCTTTTTTCCAAAAAGCTTGTGGAAATGATCTCAATAAGAATTTACCTTTCTCTTTCCATATGCAGGTTATTGTGTTGAGTGCCGCAGCAAACAAACTTGCCAAGTTGAAAAGCCATGCTGCAACCTACGCCTCACTGATCATGGAAGAGCTGGATCCTGATCATCGCGGTTACATTGAGGTACCAAGACATGAAATTATCTCCCTTTTTTTTGACAAACAGCAGCATACAGATATGCTTGTCTCAATGCAGATTTGGCAGCTGGAGACGCTACTCCGTGGTATGGTGACAGCCCAAGGGCCTCCAGAGAAGGTGAAGCTGGCTTCAGCAAGCCTTGCAAGGACAATGGTCCCTTCCAGTCACCGGAGTCCAATGCAGAGGCGTTTCAACAAGACTGTTGACTTCATCCATGAGAATTGGAAGAGGATATGGGTGCTCTCCTTGTGGGCGATCCTCAATATTGCATTATTCATGTACAAGTTTGTGCAGTACAGTAGGCGGGATGCATTTCAGGTGATGGGCTACTGTGTCTGCATAGCAAAGGGTGCTGCCGAAACACTCAAGCTGAACATGGCCGTTATACTCCTCCCGGTGTGCCGAAACACACTAACAAGGCTCCGATCAACAGCACTCAGCAAAGTCGTACCATTTGATGATAACATAAACTTCCACAAGGTACATGTGTGGAACTCTTTGCCATTTCCAGGATTACACAGCCTGACCTCTTTGTTCTGATCACCATATCAGGTTATCGCACTGACGATTGCAATTGGAGCGGCTACTCATACTCTTGCTCATGTAACCTGCGACTTCCCAAGATTGGTATCATGTCCAAGGGACAAGTTCGAGGCCACACTGGGGCCTTACTTCAACTATGTTCAACCAACATACTCATCGCTGGTTGCAAGCACTCCAGGGTGGACTGGCATCCTCATGATCTTGATAATGTCATTCTCGTTCACACTTGCGACACATTCGTTCAGGAGGAGCGTTGTGAAGCTTCCATCACCACTGCACCACCTTGCTGGTTTCAATGCCTTTTGGTACGCCCATCACCTACTGGTGATTGCATATATCCTCTTGGTGCTGCACTCCTACTTCATATTTCTCACCAAGCAGTGGTACAATCGAACGGTATTTCTCTGGCATATGTTTGGCACAACTATTTCTTTTGTGAATTCAGTGGTTGTGCATAATATTGACGCTTGTGTTTACAGACGTGGATGTTCTTGGCAGTTCCAGTCCTCTTTTACTCCTGCGAGAGAACTATCAGAAGAGTTCGTGAGAGCAGTTATGGGGTGACCGTCATCAAGGTAAGCAACATATTTCACATGAATTGCACGATGAGTATTTTCAATTTATTCTAGCTTCTAAGTGTACAAGAATACCATTAATTGACTATCAAATGTGCCATGCAGGCAGCAATTTACCCTGGAAATGTGCTCTCTATTCACATGAATAAACCATCAAGTTTCAAGTACAAAAGTGGGATGTATATGTTTGTAAAATGCCCAGATGTTTCGCCTTTTGAATGGTACCATCTGATCGTCTCTGTCCAAATGTCAGTGTTTATCCAGGCTATGGATTAATAGATTCTTCAATGCTTCCAGGCATCCCTTCTCCATAACTTCTGCACCTGGAGATGACTACTTGAGTGTTCATATCCGTACATTAGGTGACTGGACAACAGAACTTAGAAACCTATTTGGGAAGGTCAGTTGAGCAAACAGAAACAAAAAGAAAAGGAGAATAGTTCAGGCATAATGGGAGCTTATGCAGTATTTATATGCTAAATTAACAAAGTTGCTAAAGGGTTATGCTAATTCATGCAGGCTTGTGAGGCACAAGTAAGTTCCAAGAAGGCTACACTTGCACGACTTGAAACCACTATCATAGCAGATGGTCTGAAAGAGGAGACTTGGTAATTATGCCCTGTTTGTTTCATATTCTACATTCATCTACTTTTTGAAGGAATTTCTATACAATTGTTTCACTAATCTTCCTGACTTTGGTTCTCTTCATTTAGCTTTCCCAAAGTCTTTATAGATGGTCCTTTCGGCGCACCAGCTCAAAATTACAAGAAATATGACATTCTTTTGCTTATCGGGCTTGGAATTGGAGCAACGCCTTTCATCAGCATACTGAAGGATCTCCTGAACAACATAAAATCCAATGGAGTAAACTGCTTAACTATAGCAAATTCTTTCTTATACAGTAAACCAAGTGCATAATATCTAAAGTGAATTGGATTCAACAGGATGTGCAAAGCACGCATGATGCTGAGTTAGGCTACACCTTTAAGAGCAATGGGCCAGGAAGAGCTTATTTCTACTGGGTCACCAGAGAGCAAGGTTCCTTTGAATGGTTTAAAGGCGTGATGAATGATGTTGCTGAAAGTGATCATGATGTACTACTCAGTCTAACTGCTCCAGTGCAACTTCCATGTTCTCTCCTTCAGATTAATAAATAGATACTAACATAATCACTCACTATACAGAATGTAATAGAGATGCACAATTACCTGACAAGCGTGTATGAAGAAGGAGATGCAAGATCAGCTCTGATTGCCATGGTCCAATCACTTCAACATGCCAAAAATGGTGTGGATATCGTCTCTGGCAGCAAGGTTTTTCCCACTTCTATCCTCCTGCAAAAATAAAAATAAAAACTAAATCACATGTGCAAAATTTGATTCAACATTTCTCGCTTTATGCAGATCCGGACACATTTTGCAAGGCCGAACTGGAGAAAGGTATTCTCAGATCTGGCCAATGCCCACCAGAACTCTCGTATAGGTCAGTTCTATGTGATAAATCTCAAGTGATGGTTCCTAGTTTACAGGATAGCAATGCTGAGATGTTTCATAAATCTGCAGGCGTTTTCTACTGTGGGTCTCCAACACTTACGAAAATGCTGAGGGATCTTTCACTAGAATTCAGCCAGACGACAACGACTCGGTTCCATTTCCACAAGGAGAACTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020004

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020004&oldid=48760"