BGIOSGA020005

From RiceWiki
Revision as of 03:01, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020005| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020005, complete gene.| tag = OsI_202...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020005

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020005, complete gene.

LocusTag

OsI_20266

Ensembl Transcript ID

BGIOSGA020005-TA

Ensembl Protein ID

BGIOSGA020005-PA

Length

4157

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24335922..24340078

Sequence Coding Region

24335922..24336031,24337218..24337559,24340030..24340078

Genome Context

<gbrowseImage1> name=IndicaChromosome05:24335922..24340078 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:24335922..24340078 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCCGCCTTCGCCGGCGGTGGAGAGAAGCGGCCGGCCGGCCGCCGCTGACGCGAACGGCGAGAAGGAAGTTTGGACGGCGGCCATCAGGCTCAGCCACACGATCAAGCGACCAGATCGGCCGGCGGCGAGGGGGACCGCATCGCCGTGCTTCTCCGTCGCCGCCGCACCACTTCGCCGAAGCTGGAGGCGTTGGCCCCCGCGCGGTGGCGCCGGGGGAGGGCGACGGCGGCGGAACGCCGGCGAGAAGCGCGCCGCTGAGCCGTCGATCGAGGCGCCCCCGCGCAGCAGTAAGTACTACGCCCTGTGCGTTGCGGGAGGCGGGAGAACATGGCTGCGGCCGTGGAAGGCACCGGGCGTCGACGTCTGCTGCGCCAACCCCGGCGGCCGCATCCTTCTCCGGCGGGCCGGCGCACCGCGCGCCGCAGGCAGCCGGTTGGTGGGGAAAAGATGGTCAAAAAGGAAGGCTGCTGAAGATTGGCTGCATTTGGGCTCTTAG</cdnaseq>

Protein Sequence

<aaseq>MPPPSPAVERSGRPAAADANGEKEVWTAAIRLSHTIKRPDRPAARGTASPCFSVAAAPLRRSWRRWPPRGGAGGGRRRRNAGEKRAAEPSIEAPPRSSKYYALCVAGGGRTWLRPWKAPGVDVCCANPGGRILLRRAGAPRAAGSRLVGKRWSKRKAAEDWLHLGS</aaseq>

Gene Sequence

<dnaseqindica>1..110#1297..1638#4109..4157#ATGCCGCCGCCTTCGCCGGCGGTGGAGAGAAGCGGCCGGCCGGCCGCCGCTGACGCGAACGGCGAGAAGGAAGTTTGGACGGCGGCCATCAGGCTCAGCCACACGATCAAGTTTCCGCGGCCCAGATCGATCGAGTCGGCCCGAGTAACGGTTAAACGGAGGATTTTTTGCACGGAAGACCCTATACTAAAATAGTCCTACCGTTTGGGACCTCAAATCCCGGATCGCTACCAACGATAGCGATCCAAAATGGACAACTACCAGCCGACCGATCAGGATTGAACGCCTTAGATGGAGAGCTACGTCTACGAGAGGTGGAGGTTATTTTGCATGGAAGGCCCTGCACTATTGTACGATTTACTGCTTGATCCCCGGTTTTGAATCGTACAGAACCATACTCATTTTTTGGAAGGGTATTTTTACCCGGACTCTACGTCTAACATGATATATGTAGCTTTTTTTAAATTAGAAACTTAACATATTAAATAGAGAAGATAGCCCTTAAATAACCCAATCTAAAATTTGTTTCTATGGAGATTTGAACACCTTGGATGTGTTGACGAAAAATCCACGCTTACTAACTCTGATGACTCCAGGACTTAAATTTTTTTGACATTAACAGTGCTACTCATATCACTACAACCACTAGGCTACTTACTCTACTCATGTACTGTATGTATATGTATACGTATATACACACTTACGTATGTATAGGTATATACGTATACGGTATACTCCCTCCATCTACTTTTGATAGTCATATTTCATCTTGACACACAGACCAAGGATAAGTAGTTCTACTTATCATTCATTTAAGCATGCTACTAGTCATTCCTCGTAAACAAGCGATTCATTAATACTACCTCCGTCCCAAAATAAGTGCAGCCATAAGTTTCCGCGCCCAACTTTGATCGTCCGTCTTATTTGAAATTTTTCTATAATTAGCATTTTTGTTGTTATAAGATGATAAAATATGAGTAGTACTTTATCTCGTGACTTGTGTTTTTAATTTTTTTTAGAAAATTTTCAAATAAGACGAATGGTCAAAGTTGAACGCGGAAAACCATGGCTGCACTTATTTTAGGACGGAGGAAGTATTTACATTTCTCAAAGCCCATGTAGCCAATTATGTGTGTAAGAATGAAGAGTCATGCATTAAATTCGAGAAAATCATTAAGATGGTAGGTTGTTGGATTGAAATATAACTATCAAAAATAAAATTTTCAGATTTGGAAAAGTAGGTAGAGGGAGTACTTCCATGTACAGTTATCGATTTGCGGGCTTTCGTGGGCCCAGGCGACCAGATCGGCCGGCGGCGAGGGGGACCGCATCGCCGTGCTTCTCCGTCGCCGCCGCACCACTTCGCCGAAGCTGGAGGCGTTGGCCCCCGCGCGGTGGCGCCGGGGGAGGGCGACGGCGGCGGAACGCCGGCGAGAAGCGCGCCGCTGAGCCGTCGATCGAGGCGCCCCCGCGCAGCAGTAAGTACTACGCCCTGTGCGTTGCGGGAGGCGGGAGAACATGGCTGCGGCCGTGGAAGGCACCGGGCGTCGACGTCTGCTGCGCCAACCCCGGCGGCCGCATCCTTCTCCGGCGGGCCGGCGCACCGCGCGCCGCAGGCAGCCGGTTGGTGGGGAAAAGGTATACCGTATACCTGCTGCATGAAATCTCCTTTCCTCTAAGAGCCGAAAAATTCACTAAATTACACTACAGTTCTGAAATCTGTAGCAGCATTTGTACGGTAATGACATCGATGGCACTGACAAACAACATTTCAGATTTTCATCAGCTTATATCAGATTGCATAGTCTCTGAGGCGCACCAATGCTGACATTACAATCTACAAATCACTTTCTGATTTTTTATTTGCACGTTTGGCTGTCGTATGGTGACGGCATCAGGAGAAAGAGCACAATACCTACACTACACTTCACTTATACAACACTAAGTCACTAATCCTAGTACTTATACTGTGAAGTTTGTTTGACCGTCCCAACAAATATTGGAAAGACATCCACTCTTAAATATATATTTTTGTCCAGCAGAACATTCTTCCTAGAATAAATTATCTGAGACTAGCCACTTGGCAGTGGGGGATCCTGAATTGGGTGTCATGAACAAGCCTTGCATGATTTACCATTTGGTCACAGGGACCCCTTTTATGTTCTGATCATGCACATTATTATATTTGAATTTTAGGTGAATATTCCATGCATCTTTTACGTATGGTCTCTCCACTTCCGTTGAATACCGCAACACTTTCTGACCTTATTCTCAAATAAAACTTCATTCAGCCCTGTTTAAGCTTTAATTGGACCAATTGAAATGAAGAATTTCCAATTTCCGACAGAGATCTGTCGAGTGCACAAAGATTGTGTATCCTTATCGTGTCCACAATCAAGAACTAATAATTGTAATTGGTGAAGGGTTAGTAGGCCAGCTCCTAATTTTCTTATCAGAGTCAACATTAGCATCCATAGGCACTTTTGTTCATGCCATGTGTTCTTCCCTCACAATCTCCTTATGATTGATTTGTCCACGGGAGAATTGCCATCACTTCGGTTCTTGCTTCATTTCTTCTCTGGGTAATGGAATAAGGTGTGAGTGAAACACCTCACATGATGCCTTTCTTCTCCCTCCACTTGAGAAAGCAAATTGTTCCTGTAATTTGAAATCGGCCGGCTTGCTGAGTTGCTGACTGTGCTGGTAATTACCGGCAACATGCTTTGCTCCTAGCATTATTGATTATCTTGTTTTATTTTTTTTCCACATCACATAAATGAAACAGTGTTGGGAGTTAAATTTACTAGCACAGGAGCCAACTAATCTTGTACCAGGCACATTCATCAGAATTATATATATGCAGGCTTAGGCTACACAAAAGCTTGTACTAAACAGTACTACTAGTTAGACTTGTCATCATAGTGAAGTTAACAAAGTTATCACTTATCAGTGCATCGTACTTGGCATTAGCGGCCGACAGAGAATCCGCCAGCCACACTCCCCACCTCTAGGGGAGGGGAGTGACAGTTAAGTATCCCTTCATTCTCCCTCTACAATGCAGCTCATGCATAGCCTTTTGATGGAAAAGCAGAAATTCCAGAGAGGCAGCAAGAGCATACCATTTTGATTAGCTCACCACTGGCTGCCCTAAAGTAAGAAGTAGTGTAGTACACTTTTGTAGTTTTGTTGCTAATCTATTCGGCTAATTCCTACTATATTGATTTTGGAATCTTGTGTTCTTTGGATTTACTTACCTTTGTATTCCTGCAAGGGTCAAGTGCTCAGGGGCAGATCTACAGTATAAGCGTCGGTGTCAGGCGACACCGACGACTTTTGGCAAAACCTATAACAAAACTGCTTATCCATATACTATAACACTATGTTCTAAGTATAATTAGCATACTATGACACCGACAGACACGTTATGACACCAACAAACTGATTTTCTGGATCCGCCACTGCAAGTGCTGACAGATTTATTGCAGACTCGCAGTCCGTCTTCAGGTACATCTGAATTGTTTACCCATTACAAACATGCATCAGAGCTTTCGATATTTATTGCATCATGTACTGAAAATTTTCTATACATTAGCGTATGGTACATTCTATGACAAGTTTAAGTTGCTGATACAACAATAGAAGCATTGCAACTTTTCATGGAATCTCATGACTAGTGACAATAAGAAATATCTTAGGACTGTAGGGAGACGAGATAGCCGTATGCTAGTTGCAAGAGGCATCGGTTTCATTCATGCAACATTGGGCCGACTGTAAAAAGCTTACTCATTGCTCTTCTCATCATTGAGTCACAATGCTTGGATTCCCTCTTGACCGATCTTCTGATATCATGGCAACCTCTGGTGCTGCACCTTTGCCAGTTGCAAACAGTTTGGAGGGTAGTTCTTGGTCGTCCATTACTTCACTGAAGATTCCGAAATCCAACAAAATTCAGGCCGTTCTTCAGAAAGAAGCAAGCACTGCAGAGCTGAACTCTGCTTCATTGGGTGCTCTTCATGCCATTTTTAAAATTTCTTTATAGGCTACATATCTAGGACAACTCCTGCTTTATTCTTGATGATACGCATTTGCTGCATTTGAACGGTTTCAGATGGTCAAAAAGGAAGGCTGCTGAAGATTGGCTGCATTTGGGCTCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020005