BGIOSGA020022

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Revision as of 03:01, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020022| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020022, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA020022

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020022, complete gene.

LocusTag

OSJNBA0052E20.3

Ensembl Transcript ID

BGIOSGA020022-TA

Ensembl Protein ID

BGIOSGA020022-PA

Length

2329

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24545100..24547428

Sequence Coding Region

24545100..24545624,24545728..24545891,24545977..24546627,24546732..24546849,24546946..24547134
,24547258..24547428

Genome Context

<gbrowseImage1> name=IndicaChromosome05:24545100..24547428 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:24545100..24547428 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTTGCCCTGGTTGGCGACCCTTCGAATGGCGTGGCGAAGCCGTCGTGCGACTCCGTCGGCTCTCTGCCCGCCGTCAGCTCCAAGGCCGTCATCCACCCGCCGGTGACCAGCGCGGCGGGCGCCACGCTCGGCAGGCACCTCGCGAGGCGCCTCGTGCAGATCGGCGCCACCGACGTGTTCGCCGTCCCCGGGGACTTCAACCTCACCCTGCTCGACTACCTCATCGCCGAGCCCGGGCTCAAGCTCATCGGCTGCTGCAACGAGCTCAACGCCGGGTACGCGGCCGACGGCTACGCCCGCGCCCGCGGCGTCGGCGCGTGCGCCGTCACGTTCACCGTCGGTGGCCTCAGCGTGCTCAACGCCATCGCCGGCGCCTACAGCGAGAACCTCCCCGTGATCTGCATCGTCGGCGGGCCCAACTCCAACGACTACGGCACCAACCGCATCCTGCACCACACCATCGGCCTCCCGGACTTCTCACAGGAGCTCCGCTGCTTCCAGACCATCACCTGCTACCAGGCCGTCATTAACAACCTCGACGACGCGCACGAGCAGATCGACACCGCCATAGCGACGGCCCTAAGGGAGAGCAAGCCAGTGTACATCAGCGTGGGCTGCAACCTGGCGGGCCTCTCTCACCCGACGTTTAGCCGCGAGCCAGTGCCGTTGTTCATCTCGCCAAGATTGAGCAACAAGGCGAACTTGGAGCACGCCGTCGAAGCCGCGGCGGACTTCCTGAACAAGGCGGTGAAGCCGGTGATGGTCGGGGGGCCAAAGATCCGGGTGGCCAAGGCGAAGAAGGCGTTCGCCGGCATCGCGGAGTCGAGCGGGTACCCGTTCGCGGTGATGCCGTCCGCCAAGGGCCTCGTGCCGGAGCACCACCCGCGGTTCATCGGCACGTACTGGGGCGCCGTGAGCACCACCTTCTGCGCCGAGATCGTCGAGTCCGCCGACGCCTACCTCTTCGCCGGCCCGATCTTCAACGACTACAGCTCCGTCGGCTACTCCCTGCTGCTGAAGCGGGAGAAGGCCGTCATCGTGCAGCCCGACCGCGTGGTGGTCGGCAACGGCCCGGCGTTCGGCTGCATCCTCATGACTGAGTTCCTCGACGCGCTCGCCAAACGCCTCGACCGCAACACGACGGCGTACGACAACTACCGCCGCATCTTCATCCCCGACCGCGAGCCGCCCAATGGCCAGCCCGACGAGCCACTCAGGGTCAACATCCTCTTCAAGCACATCAAGGAGTTGCTGTCCGGCGACACCGCCGTCATCGCCGAGACCGGTGACTCGTGGTTCAACTGCCAGAAGCTCAGGCTCCCCGAGGGCTGCGGGTACGAGTTCCAGATGCAGTACGGCTCGATCGGGTGGTCCGTCGGCGCCACGCTCGGCTACGCCCAGGCGGCCAAGGACAAGCGCGTCATCTCCTGCATCGGCGACGGTAGCTTCCAGATGACGGCGCAGGACGTGTCGACGATGTTGCGGTGCGAGCAGAAGAGCATCATCTTCCTCATCAATAATGGTGGGTACACCATCGAGGTGGAGATCCACGACGGGCCGTACAACGTCATCAAGAACTGGGACTACACCGGCCTCATCGACGCCATCCACAACTCTGACGGCAACTGCTGGACAAAGAAGGTCCGGACTGAGGAGGAGCTGATAGAGGCGATCGCGACGGCAACGGGCGCCAAGAAAGACTGCCTCTGCTTCATCGAGATCATCGTGCACAAGGATGACACGAGCAAAGAGCTTCTCGAGTGGGGATCCAGGGTATCGGCTGCCAACAGCAGGCCGCCGAATCCCCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MELALVGDPSNGVAKPSCDSVGSLPAVSSKAVIHPPVTSAAGATLGRHLARRLVQIGATDVFAVPGDFNLTLLDYLIAEPGLKLIGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTITCYQAVINNLDDAHEQIDTAIATALRESKPVYISVGCNLAGLSHPTFSREPVPLFISPRLSNKANLEHAVEAAADFLNKAVKPVMVGGPKIRVAKAKKAFAGIAESSGYPFAVMPSAKGLVPEHHPRFIGTYWGAVSTTFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKREKAVIVQPDRVVVGNGPAFGCILMTEFLDALAKRLDRNTTAYDNYRRIFIPDREPPNGQPDEPLRVNILFKHIKELLSGDTAVIAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVISCIGDGSFQMTAQDVSTMLRCEQKSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLIDAIHNSDGNCWTKKVRTEEELIEAIATATGAKKDCLCFIEIIVHKDDTSKELLEWGSRVSAANSRPPNPQ</aaseq>

Gene Sequence

<dnaseqindica>1..525#629..792#878..1528#1633..1750#1847..2035#2159..2329#ATGGAGCTTGCCCTGGTTGGCGACCCTTCGAATGGCGTGGCGAAGCCGTCGTGCGACTCCGTCGGCTCTCTGCCCGCCGTCAGCTCCAAGGCCGTCATCCACCCGCCGGTGACCAGCGCGGCGGGCGCCACGCTCGGCAGGCACCTCGCGAGGCGCCTCGTGCAGATCGGCGCCACCGACGTGTTCGCCGTCCCCGGGGACTTCAACCTCACCCTGCTCGACTACCTCATCGCCGAGCCCGGGCTCAAGCTCATCGGCTGCTGCAACGAGCTCAACGCCGGGTACGCGGCCGACGGCTACGCCCGCGCCCGCGGCGTCGGCGCGTGCGCCGTCACGTTCACCGTCGGTGGCCTCAGCGTGCTCAACGCCATCGCCGGCGCCTACAGCGAGAACCTCCCCGTGATCTGCATCGTCGGCGGGCCCAACTCCAACGACTACGGCACCAACCGCATCCTGCACCACACCATCGGCCTCCCGGACTTCTCACAGGAGCTCCGCTGCTTCCAGACCATCACCTGCTACCAGGTCCGCGCAATGAGCCCTGCCCTCGTCTTTCTTTTGCACTGAGTGTCTTGCTGCATTTCGTCGAACACCTGAGCTGAACAGAGAGTGCGTTGCACGCATGCAGGCCGTCATTAACAACCTCGACGACGCGCACGAGCAGATCGACACCGCCATAGCGACGGCCCTAAGGGAGAGCAAGCCAGTGTACATCAGCGTGGGCTGCAACCTGGCGGGCCTCTCTCACCCGACGTTTAGCCGCGAGCCAGTGCCGTTGTTCATCTCGCCAAGGTAATACTGAGCTCAAAACGCATGCATCTTGTGTTAGAATCTTTTTTATCCATTAGTTTATTAATTTTGGTATCTGTTCCATTAGATTGAGCAACAAGGCGAACTTGGAGCACGCCGTCGAAGCCGCGGCGGACTTCCTGAACAAGGCGGTGAAGCCGGTGATGGTCGGGGGGCCAAAGATCCGGGTGGCCAAGGCGAAGAAGGCGTTCGCCGGCATCGCGGAGTCGAGCGGGTACCCGTTCGCGGTGATGCCGTCCGCCAAGGGCCTCGTGCCGGAGCACCACCCGCGGTTCATCGGCACGTACTGGGGCGCCGTGAGCACCACCTTCTGCGCCGAGATCGTCGAGTCCGCCGACGCCTACCTCTTCGCCGGCCCGATCTTCAACGACTACAGCTCCGTCGGCTACTCCCTGCTGCTGAAGCGGGAGAAGGCCGTCATCGTGCAGCCCGACCGCGTGGTGGTCGGCAACGGCCCGGCGTTCGGCTGCATCCTCATGACTGAGTTCCTCGACGCGCTCGCCAAACGCCTCGACCGCAACACGACGGCGTACGACAACTACCGCCGCATCTTCATCCCCGACCGCGAGCCGCCCAATGGCCAGCCCGACGAGCCACTCAGGGTCAACATCCTCTTCAAGCACATCAAGGAGTTGCTGTCCGGCGACACCGCCGTCATCGCCGAGACCGGTGACTCGTGGTTCAACTGCCAGAAGCTCAGGCTCCCCGAGGGCTGCGGGTAAACGCCACGCACACCGATCGTCTCCACGCCCCCGGCAACCTTCCACGCTTTCACCTCAGCTTCCCAAAATTCAATAACGAAAGGCTGGTCATTCCCAACAGGTACGAGTTCCAGATGCAGTACGGCTCGATCGGGTGGTCCGTCGGCGCCACGCTCGGCTACGCCCAGGCGGCCAAGGACAAGCGCGTCATCTCCTGCATCGGCGACGGTAGCTTCCAGGTGCGTCCTCTGCTGCTACGATCTCTGTTTTTCTCGCCAATGGCGGCGGCTGTAGCGCTGTACTAATGCAGTAATGCGGTTTCCCGCGACGTACAGATGACGGCGCAGGACGTGTCGACGATGTTGCGGTGCGAGCAGAAGAGCATCATCTTCCTCATCAATAATGGTGGGTACACCATCGAGGTGGAGATCCACGACGGGCCGTACAACGTCATCAAGAACTGGGACTACACCGGCCTCATCGACGCCATCCACAACTCTGACGGCAACTGCTGGACAAAGAAGGTTGGGTTCAAACACCACCACTACTAGTAACTACTGCTACTAGTAGTACTAAATACGGCTAAGTGCAATTGGACTGCTCGATCGTGACAGCTCAAAACCTTTTTTGCCGTTGTTTTTCAACAGGTCCGGACTGAGGAGGAGCTGATAGAGGCGATCGCGACGGCAACGGGCGCCAAGAAAGACTGCCTCTGCTTCATCGAGATCATCGTGCACAAGGATGACACGAGCAAAGAGCTTCTCGAGTGGGGATCCAGGGTATCGGCTGCCAACAGCAGGCCGCCGAATCCCCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020022