Os12g0102300

From RiceWiki
Revision as of 10:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0102300| Description = Similar to WRKY transcription factor 57| Version = NM_001071768.1 GI:115486857 GeneID:4351243| Length = 3207 bp| De...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0102300

Description

Similar to WRKY transcription factor 57

Version

NM_001071768.1 GI:115486857 GeneID:4351243

Length

3207 bp

Definition

Oryza sativa Japonica Group Os12g0102300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:99799..103005

Sequence Coding Region

100009..100587,101413..101491,102244..102956

Expression

GEO Profiles:Os12g0102300

Genome Context

<gbrowseImage1> name=NC_008405:99799..103005 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:99799..103005 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcacacggcggcggcgaggaagaggaggagcgggtgctgagccacggcgacgtggtgctgctccgctgcgacctcaccatcctccgtggcccccacttcctcaacgaccgcatcatcgccttctacctcgcccacctcgccgccgaccaccacgacgacgacctactcctgcttcccccctccgtcccctacctcctctccaacctccccgaccccgcctccgtcgccgccgtcgccgaccccctccgcctcgcctcccgccgcctcgtcctcctccccgtcaacgacaaccccgacgtctcccacgccgagggcggctcccactggaccctcctcgtcctcgacaactccaacgccgtctccggcccccgcttcgtccaccacgacagcctcccacccaccaacctgccctccgcgcgccgcctcgccgccgtgctccgcccgctgctccccgcctccgcgatcccgctcatcgagggccccacgcccaggcagacaaacggctacgactgcggcgtcttcgtgctagcggtggccagggccatctgcaactggtggcccacccgcgcccgccattccaattccgattccgattggttggaggccgtgaagagggaggtgaacgccgacagcgtcaaggccatgaggacccagctgctgcagctcatccataccctcatccaaaacaacaccaccaccaaccaacattccccttcaactcaacttccttctcacccttcgattgcatctaccagtctgcctgtcacagcacaagactttgggacttggctagaagacagtggaacacatacagcatacgatcaaaagaaagcagatacaggaaagggggcctgttgggacaatttgacagtgtcccagagtgtcaggaagccaaatgtcagtgcgaagaacagtttgtcctacgatggctacagctggaggaagtatgggcagaagcaagtgaaagggagcgagttcccacggagctactacaagtgcactcacccaacatgccctgtcaagagaaaggtggagatgacaccagatggccggattgctgaaattgtatacaacggtgagcacaaccaccccaaacctcatcctccaagaaagccaacattatcaacaagtgtggagactctggttgccactaatgatgctggattagaaaacaagttagaaggatgtgaccaagctattggttctgatgctgttgttgaagcattaagaggtggctgtcactgcttggatggatttagaaatggtaatgagatcagtgactgcaagaaaaggtatgcttatgctgtaattttcattcagaacttactaatgtttttttgtgccaaaaatgtgcaagtggttgcttaa</cdnaseq>

Protein Sequence

<aaseq>MAHGGGEEEEERVLSHGDVVLLRCDLTILRGPHFLNDRIIAFYL AHLAADHHDDDLLLLPPSVPYLLSNLPDPASVAAVADPLRLASRRLVLLPVNDNPDVS HAEGGSHWTLLVLDNSNAVSGPRFVHHDSLPPTNLPSARRLAAVLRPLLPASAIPLIE GPTPRQTNGYDCGVFVLAVARAICNWWPTRARHSNSDSDWLEAVKREVNADSVKAMRT QLLQLIHTLIQNNTTTNQHSPSTQLPSHPSIASTSLPVTAQDFGTWLEDSGTHTAYDQ KKADTGKGACWDNLTVSQSVRKPNVSAKNSLSYDGYSWRKYGQKQVKGSEFPRSYYKC THPTCPVKRKVEMTPDGRIAEIVYNGEHNHPKPHPPRKPTLSTSVETLVATNDAGLEN KLEGCDQAIGSDAVVEALRGGCHCLDGFRNGNEISDCKKRYAYAVIFIQNLLMFFCAK NVQVVA</aaseq>

Gene Sequence

<dnaseqindica>2419..2997#1515..1593#50..762#ccggagggcgagccccttgtctccctctcctccgcccaccccaccggcgatggcacacggcggcggcgaggaagaggaggagcgggtgctgagccacggcgacgtggtgctgctccgctgcgacctcaccatcctccgtggcccccacttcctcaacgaccgcatcatcgccttctacctcgcccacctcgccgccgaccaccacgacgacgacctactcctgcttcccccctccgtcccctacctcctctccaacctccccgaccccgcctccgtcgccgccgtcgccgaccccctccgcctcgcctcccgccgcctcgtcctcctccccgtcaacgacaaccccgacgtctcccacgccgagggcggctcccactggaccctcctcgtcctcgacaactccaacgccgtctccggcccccgcttcgtccaccacgacagcctcccacccaccaacctgccctccgcgcgccgcctcgccgccgtgctccgcccgctgctccccgcctccgcgatcccgctcatcgagggccccacgcccaggcagacaaacggctacgactgcggcgtcttcgtgctagcggtggccagggccatctgcaactggtggcccacccgcgcccgccattccaattccgattccgattggttggaggccgtgaagagggaggtgaacgccgacagcgtcaaggccatgaggacccagctgctgcagctcatccataccctcatccaaaacaacaccaccaccaaccaacattcgtgctagctagctgttgctctttcacaacttatttgtagtcttcgtgttcttactgatattatatatatggttttctgtgagcacagcaagaacaacatgtacaaatagaacaggtcttgtgtagtaatctttttgcagaattttggggtccaaatactctttactgttggttatggttaatgaaacaatgctattgtgcctattatttgagtataaatggttgaatcagtgttggagctcatagccttatgttctgtgatccatatagaacaacaacagcaaccaacagtcctagctattgattcattctgtgctgctcttgagagcttaattgtctctgtgcttgcggtgattgttttcccctgagcttgcaacaaggacatgtagactatactaggtcttgtgtaagtaagtagtaatccattttgcagaattcatcagttcaaatactctttattactgctgtttatggttaatgcaacaatgctactgtgcttatgcttgcaagttacttgagtatatggttgaatcagtgttggagctcatggtcttatcttatgtttttgtgatccacagattaaattggtacattacctagtaatgttagatgagccgagtcattggtatttgcatttggtaaactgcagcaaggagggcagctatctggcatctgccagtctacctaccacttccggacctaacagtcatacatgcatccttaactatcttccttttctcctctccttatcagcccttcaactcaacttccttctcacccttcgattgcatctaccagtctgcctgtcacagcacaagactttgggacttgggtatgtgaactatgattcttcttcctttctcaatttttgctttgtacatgcacaagaggaaaacaagtaaacatcttgaaataaagcattattacttcagcatgttctgcatgttttgttgcttggtctcaaccaggcttcaaaattcagctatagattgcataaattcactttttttttccatgcatgctattttgttccagtatcactcttctcttcttttttttttggtcaattcctcagttttacatctagctcactatgagtttccctctgttctcttttattcattcaccacgtacaggtagcagcagaggggagcacatccatgacttgtgttcataaattttgtgttattctaccttctttctttgtcatttcactttggtacataaactgtgctaaaaatttcaccagtgcgatatgcaaagccacaagaaggttgctgctgtgaagcctgtggcttccaggccttcttccagattgaggtccttctcaatgctccaggaagactccactgctattgattctcctcgggttacttccctggaggagattatattaaggcgtccaaaggcaacgcgattcacacacccattgagtaattcatcgacagaaattgctgcaaccagagtcagttcgacacgaaattcaacttctctgtttcctggaaagaaatttcattttctttctgacagttacataattttgcaccttcttttaaatgatgctttttataattatacatctgtccattagattattttgaacctacctttgacatgatcatatggtcattttctaacaacatgctgaactttttagctagaagacagtggaacacatacagcatacgatcaaaagaaagcagatacaggaaagggggcctgttgggacaatttgacagtgtcccagagtgtcaggaagccaaatgtcagtgcgaagaacagtttgtcctacgatggctacagctggaggaagtatgggcagaagcaagtgaaagggagcgagttcccacggagctactacaagtgcactcacccaacatgccctgtcaagagaaaggtggagatgacaccagatggccggattgctgaaattgtatacaacggtgagcacaaccaccccaaacctcatcctccaagaaagccaacattatcaacaagtgtggagactctggttgccactaatgatgctggattagaaaacaagttagaaggatgtgaccaagctattggttctgatgctgttgttgaagcattaagaggtggctgtcactgcttggatggatttagaaatggtaatgagatcagtgactgcaagaaaaggtatgcttatgctgtaattttcattcagaacttactaatgtttttttgtgccaaaaatgtgcaagtggttgcttaaaatatcaagtagcatattatgatatttacgttacagacccacagcctccttggaggacactcttagatgattgctgtgaaattgtcgtgtgcctaggcttttccgttttggagtgagatttcatgatggttcatgtaagagaattctggcacaaccgcataatataattaatttagggtcacatttggtagctgaatatgttcaggaaaa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0102300, RefSeq:Os12g0102300