Os09g0360900

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Revision as of 07:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0360900| Description = Conserved hypothetical protein| Version = NM_001188871.1 GI:297726872 GeneID:9269712| Length = 5742 bp| Definition ...")
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Gene Name

Os09g0360900

Description

Conserved hypothetical protein

Version

NM_001188871.1 GI:297726872 GeneID:9269712

Length

5742 bp

Definition

Oryza sativa Japonica Group Os09g0360900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12384446..12390187

Sequence Coding Region

12385435..12385500,12385601..12385745,12386161..12386274,12386532..12386656,12386750..12386908
,12387014..12387206,12387328..12387382,12387462..12387528

Expression

GEO Profiles:Os09g0360900

Genome Context

<gbrowseImage1> name=NC_008402:12384446..12390187 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:12384446..12390187 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctcctcccttttctccctctcaagtgacagactatcttgatatcctctccaggatagttgttggttcagacacacagccatggtatacccaattgctagagcccgctttttcctctggtaaaactttgcatcttctccagcctcgttgcatgcccttcatgtttgggaccattccatacaatgcagggggcgtacccttacatatcgatatacagtgtattgaagttcagatgttgtggcgtgaaagtgcatcagttatcaactatgaactgtttaagggttacgtacaaagaggaggagaaacaaatgagtttgttgcaggttatgacttcttgaacacgacaggatatgacctcaatataaatgtttggtacaactctacttataatgataacactgcatattcatttatcgcagcattacgagttccacgattggtgaatgcaatatccaatgcatacctaaaatttatcagaggaagtggggtggatatgctgcttgaatatgtaaaagagatgcccaaagttggaacaaggtttaggcttgatctctcttctcttctcagtgtgctattcttcacatggatagttgaactacttttcccagttatgttgacatatctggtgtatgagaaggaacaaaagctaaaaattatgatgaagatgcatggtctgaaggatgggccttactggctaatttcttatgcttatttctttgctctatcggttatctatatgacattttttgtgatttttggctccttaattggtaattttcttccaatctattttcacgaagattgcacttgcattttttgtggcatctttcttttcatctgtcaagacagccactgtgattggatacatttatgtatttggctctggcttgctaggggcatttctttttcgtttctttgttga</cdnaseq>

Protein Sequence

<aaseq>MPPPFSPSQVTDYLDILSRIVVGSDTQPWYTQLLEPAFSSGKTL HLLQPRCMPFMFGTIPYNAGGVPLHIDIQCIEVQMLWRESASVINYELFKGYVQRGGE TNEFVAGYDFLNTTGYDLNINVWYNSTYNDNTAYSFIAALRVPRLVNAISNAYLKFIR GSGVDMLLEYVKEMPKVGTRFRLDLSSLLSVLFFTWIVELLFPVMLTYLVYEKEQKLK IMMKMHGLKDGPYWLISYAYFFALSVIYMTFFVIFGSLIGNFLPIYFHEDCTCIFCGI FLFICQDSHCDWIHLCIWLWLARGISFSFLC</aaseq>

Gene Sequence

<dnaseqindica>990..1055#1156..1300#1716..1829#2087..2211#2305..2463#2569..2761#2883..2937#3017..3083#aatcggtttaactcaaaatcccaactccgaacgcctcttcttctcctcaccgccgccgaagcgtagcggctactccccatctgcctccgcctccgcctctcccatggatgatgacgattccgcgaggaggagggggaggagccccgccagcttctccacccaggcctccgccctcctccgcaagaacctctgcttccaggaaagccgcaccgattgatcccttctctgtgtctgccttgctgcccgcgacgtgtttgtggatatgcctgcccggttcttatggtttaatcatgctgctctggtttggggcttttggatggatgatgggcagccatcgatttcatctgtgttcttgggagggtgggaggcatatggttgatggtttttggtggtggcatctgattcttgtctctttggctgcgggtgcagaggcggaacctgaagacgaacgtcggcatcaccgtcttcccgatcctcatctgcgtgctgctcgtcgtgcttcagaacgtgatcaacggggagctcgacaagcccaagtaccagtgcggctgcgaatgcaccgagagtgacctggatgggacctgcctgcggaaggagtgcggcatccagcactcgacgctggagcaggtatggagctgcgaggtgcccagcccaccacggtggccggccctgattcaggtcccctggccagggttccgggctgtcgggaccgcatcgcagccgttcgacgatttgcctaacccattgtgccgtggcgacgggtcttgccctgtcactctcctcgtcactggagagaaccaaacattagctgagcgtatgtgtcatattttccatattgctgatcgattgctaaaatgaatacttgaacttttcatatttcaaaaaattaggtgaatgtgttcatagttcttgagtacttccaattgacaggtgtttcaggtcgggtgtttcctgccctttatccgttgcctaatgtgacagactacctgatgcctcctcccttttctccctctcaagtgacagactatcttgatatcctctccaggatagttgttgtgagttccttcgatggctgcatgagtatacatcttgtagatcacgcttttttcttgaaaaatagcttatggagttattggttggactgatttgtcatagggttcagacacacagccatggtatacccaattgctagagcccgctttttcctctggtaaaactttgcatcttctccagcctcgttgcatgcccttcatgtttgggaccattccatacaatgcagggggcgtacccttacatatcggtaagttaaagcttccttctttgcaatgttgaatttgtgacttgtgttgaaaaacttaagttactttgctagtaagtcaggctagggatgcaaatatgcaattcaaaacttttcctgtacaaattcatttacatttgaagggactaaaaaatattttcctgttctgttattcattttgcatggtttctactttcaatacaatcaaacagaaacaagacaactagtttttttagataatggaatatagtagttgtgtggtgagacttgtacatgtctagtacgttgtgtagtgtagcttttcctaactatttatgcagtctgtttgacaacaataaatacaatatgttcatcgttcatttagactctttcgtagggctgcctagattgtattctgatgtcctgttgaatgaaccagatatacagtgtattgaagttcagatgttgtggcgtgaaagtgcatcagttatcaactatgaactgtttaagggttacgtacaaagaggaggagaaacaaatgagtttgttgcaggttatctttctatctcaatgtgaccattttgtggtcaatttgcaaccagaatgagtttgtgtaacagtggttttttttcacattttgaatttgaataccttccaacagactgcttttgaatgccacacatagtacagataattccatggccccatctccaaataattgcttcaaaacataacaaatgtagtttttcgtataaatggtggtggttatttgcaatgatgtgtgctgtatagtttaattgttctctgcaggttatgacttcttgaacacgacaggatatgacctcaatataaatgtttggtacaactctacttataatgataacactgcatattcatttatcgcagcattacgagttccacgattggtgaatgcagtatgttttccttttcataacttcgtcctgagtaatttcggtgtattacagaaccatctgacaattcagcaatttatgctttgtttcctgcagatatccaatgcatacctaaaatttatcagaggaagtggggtggatatgctgcttgaatatgtaaaagagatgcccaaagttggaacaaggtttaggcttgatctctcttctcttctcagtgtgctattcttcacatggatagttgaactacttttcccagtgagtatgatgtgatttaacaagttcagatgcaaaagaaaaagggagtgttgagtgtgttatggtcaggatttgtacagcttgcaaattgactctcttttccaggttatgttgacatatctggtgtatgagaaggaacaaaagctaaaaattatgatgaagatgcatggtctgaaggatgggccttactggctaatttcttatgcttatttctttgctctatcggttatctatatgacattttttgtgatttttggctccttaattggtaattttcttccaatctattttcacgaaggtgctgttctgacaaataaatctagatatttcaatagattttttttgtaggtctaaatttcttcagactcaatgactacagcatacagtttgctttcttcttcatttatataaatttgcagattgcacttgcattttttgtggcatctttcttttcatctgtcaagacagccactggttagtgattcaaccttgtaagttataagtccaaaatgtttcttactggaagtcacaaattacatatttcctcctgcagtgattggatacatttatgtatttggctctggcttgctaggggcatttctttttcgtttctttgttgaggacaggacctttcccagtaagttattatatctgttgtatttttcaacttaatttacataatatgggtaacaagcatttttgttttctactcagatggttggttgttagtaatggagattgtcccaggattttccctctatcgaggactatatgaacttggccaatatgctttctctggaagtgctatgggagcctctggcatgacatggggaaatttgagagacccaatcaatggaatgtgtggtatatttatcatcatgacagtagaatgggcatttctccttatgttagcattctatttggatcaagtctctccagtaggtggtggtgtcaggaaaaggcccttattcttcttcaggtgtttacagaagaagcacacaccgtcattgcagaagcctagctttgtgcaacagggttctaaagtaattgtcgatatggagaagccagatgttgctcaagaagtaggttacctgctatactttgccagtccagatttaatggagtacatatgttctaaatttattcattatacaaattctatccagagagaagtagttgagcaacttttggtaggccgcaatgcaaatcaagctattatatgtcacaacctcaagaagatctatcctggaagggatggaaaccctgataagctggcggttcgaggattatctcttgccgtaccaaaagggcagtgctttggaatgcttggcccaaatggagctgggaaaacatccttcattagtatggtatagtactaaaatggcacgtggtaccattttttgtgaaaattgcttagttgtggcagctcacctttattaaccttgttttgttattttaccagatgattgggcttgttaaacctacatctggtacttcctatgttcatggaatggatatcaatatggatatggatcacatatatacaaacatgggggtgtgcccacagcatgagtatttgctacaactagcacttatctgaccaaaaagaatctttcccagaccagattattttttttatagtaatacgttttaatctgaaatgcagcttactttgggaaccattgactggaaaagaacatctgttcttttatggcaggctgaagaatcttaaaggtgctgtgttggtgaaggtacctctactctgcctcacttatttttaaatttaatatccacatttcattgttgaccatatgaagttgttttgtcacgtatttcataaactatactgctcagctatctcagcatatgtacatcttgtatttgaaccatgtctgggatttttccactgttaggctgttgaggatgctctgaagagcgtaaatctgttccatggtggtgttggtgataagcaagtgggaaagtacagcggaggcatgaaaagaaggctcagtgtggcaatatcattgattggagaccccaaagtacttttctgtatatttttttaacccttccataggatgtccttttgttcttttgttaatgtgttatgcaacctgacaacacattctgtaggtcgttttcatggatgaaccaagcactgggctagaccccgcatcaagaaataacttgtggaatgttgtgaaggaggccaagcgaaaccgtgcgatcgttcttactagtacttatccttttccctttctactttcgcgtccaattcttagattcctaacgcgtcacttattgattttaaaatttacaagagtatcaaatagtgttgatcaaatgtgattctcgcagcgcactcgatggaggaggctgaagtactttgtgatcgacttggcatctttgtcgatggcgatttccaatgtcttggaaatcctaaggaggtacattttattgccttcttgaatcacactgtgtgctttatgaccagatctaaaacctcatttgcacaatgcagctaaaggcgagatatgggggagcatacatattcacaatgacaacatctccagaccaagaacaagaggttgaacggctagttcatgacttgtctccgagcgcaaataagatctaccacctatctggaactcaaaagttcgagctgccaaagcaagaggtgaaaatagccgaggtatttcgcgcagttgaggatgcgaagaaacggttcaccgtgcatgcctggggcctggttgataccaccttggaggatgtcttcataaaggttgccaagggagcaaaggcatccagtgttaatagttagtttgtgcattgataatattgtgagatttataggccgactaatattcttttatgtcttgactttagcatatatgattctttaaagttcgagctgccaaagcaagaggtgaaaatagccgaggtatttcgcgcagttgaggatgcgaagaaacggttcaccgtgcatgcctggggcctggttgataccaccttggaggatgtcttcataaaggttgccaagggagcaaaggcatccagtgataatagttagtttgtgcattgataatattgtgagatttataggccgactaatattcttttatgtcttgactttagcatatatgattcttttgtggttgtacagaaacatattattctcatacatcagaaaaaaaagtaaccatatgtaacatttttgtttattttaaatgtacaaatgactcaatatatcattgcagatatgcgggaattacaaaatat</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0360900, RefSeq:Os09g0360900