Os12g0102500

From RiceWiki
Revision as of 10:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0102500| Description = Protein kinase-like domain containing protein| Version = NM_001071770.1 GI:115486861 GeneID:4351245| Length = 4651 b...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0102500

Description

Protein kinase-like domain containing protein

Version

NM_001071770.1 GI:115486861 GeneID:4351245

Length

4651 bp

Definition

Oryza sativa Japonica Group Os12g0102500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:111857..116507

Sequence Coding Region

112039..112368,112500..112635,112772..112955,113067..113135,113703..113829
,115810..116051,116125..116279,116480..116505

Expression

GEO Profiles:Os12g0102500

Genome Context

<gbrowseImage1> name=NC_008405:111857..116507 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:111857..116507 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cttttcaaaaagagcattattttcaacttctcaggaaacagtgaccttcgcatgggacacagtaacactggccgcactatagtaattattgtatgtgctgtggttggggccattttgattcttgttgctgctattgtttgttacctgttcacatgcaaaaggaagaagaaatcatcggacgaaaccgttgttattgcggcaccagcaaaaaagctaggctcatttttcagtgaagtggccacggaatcggcgcacagatttgcattgtctgaaattgaagatgctactgacaaatttgacagaagaattggttcgggagggtttggcatagtatactatggaaagcttacagatgggagagaaatcgcagtcaaacttctcacaaatgactcctatcaaggcatccgagaattcctgaatgaggtaacattgctttcaagaattcatcatagaaacctggtgagcttccttggttacagccagcaagatggtaaaaatatacttgtgtatgaattcatgcataacgggacgttaaaagaacacctccgtggaggccctgatgatgtaaaaataaatagctgggtcaagcgtcttgagatagcagaagatgctgcaaaaggaatagagtatctccacacaggatgctccccaactatcatccacagagacctcaagagcagtaacattctccttgacaagaacatgagagcaaaagttgcagactttggcttgtcaaaacctgttgtcgacgggtctcatgtatcaagtatagttagaggaacagttggatatctggacccagagtactatatctcgcagcagctaacagagaagagtgatatgtacagttttggtgtcattttacttgagctaatctcaggccatgaaccaatctcaaatgacaactttgggctccactgccgtaacattgttgaatgggctagatcgcacatggagagtggggatatccacggcatcattgatcagtcgttagacgcagggtacgacctgcagtcggtgtggaagattgcggaggtggcgacgatgtgcgtgaagcccaagggggtgctgaggccgtccatctcggaggtgctcaaggagattcaggacgccattgccatcgagctgcaacgggagctgccctccagcattcaccacctcatgtccaagacgtctccctccgaagccgtcaacacgacaggcagtctgcaagacctggagcagaatgcgtcgtttgatgagctgctcatgcgcccaggtctcaggtag</cdnaseq>

Protein Sequence

<aaseq>LFKKSIIFNFSGNSDLRMGHSNTGRTIVIIVCAVVGAILILVAA IVCYLFTCKRKKKSSDETVVIAAPAKKLGSFFSEVATESAHRFALSEIEDATDKFDRR IGSGGFGIVYYGKLTDGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRNLVSFLGYS QQDGKNILVYEFMHNGTLKEHLRGGPDDVKINSWVKRLEIAEDAAKGIEYLHTGCSPT IIHRDLKSSNILLDKNMRAKVADFGLSKPVVDGSHVSSIVRGTVGYLDPEYYISQQLT EKSDMYSFGVILLELISGHEPISNDNFGLHCRNIVEWARSHMESGDIHGIIDQSLDAG YDLQSVWKIAEVATMCVKPKGVLRPSISEVLKEIQDAIAIELQRELPSSIHHLMSKTS PSEAVNTTGSLQDLEQNASFDELLMRPGLR</aaseq>

Gene Sequence

<dnaseqindica>4140..4469#3873..4008#3553..3736#3373..3441#2679..2805#457..698#229..383#3..28#cgcttttcaaaaagagcattattttcaagtatgtgtagctttttctttaagcatagcttaatcatttgatatgagcagtgcatacttttgtgcctatatgaactccagtgtggcttagcaagcttcatttaccttcgatgaaagtatatatttgtttcccatgtaaatcgagtacctaacttgtgcataggattgtgctgtttgttctgatctgttacccgtatgcagcttctcaggaaacagtgaccttcgcatgggacacagtaacactggccgcactatagtaattattgtatgtgctgtggttggggccattttgattcttgttgctgctattgtttgttacctgttcacatgcaaaaggaagaagaaatcatcggacggtgcgtattctttagctcattggacatatctggtatggtgtatggtcgcgtagtaattactttgtgtctccagaaaccgttgttattgcggcaccagcaaaaaagctaggctcatttttcagtgaagtggccacggaatcggcgcacagatttgcattgtctgaaattgaagatgctactgacaaatttgacagaagaattggttcgggagggtttggcatagtatactatggaaagcttacagatgggagagaaatcgcagtcaaacttctcacaaatgactcctatcaaggcatccgagaattcctgaatgaggtatgtttcttttcttgccttatagttttttcttgaaatataaatcacatacacagtaagtgttagcgttcggcctaaaatatgaagactattaaacttaggctaaaaatggatgactattcccgtttggccaaaaattaaccttgggcccaaaaatggttgactattagccttcacctcaatgacacaactattaagtctttggtccaaaaacacatgagtattaaccttgggcccaaaaacaaatgaatgttagcttgggccaaaaatgcatgattgtttagccttcagctcaaaaacacatgagtattaccttcgagcccaaatcacataaatattaccttcgctcaaaatgtcatgaatattatccttgagctgaaaaaacacaagaatatttgccttactccaaatacacaggtgtattactcttccaccaaaaaaacatacaagtattaaccttcggcacaaaatttcattagtattgaccttgggaccataagtgcatgaatttgggcttcgtctaaaaatttcaagagtgttaaccttggtcaaaaaacacatgaatattagcttttgccccataatttctttactcttagggctagttcgaaccagcagtttggctgcagcggttcgcagctcggaaacggggcatatcattagcacataattagttacgtactccctccatccaaaagtgttaggcaatttttttttggtttttctaaaagagatgattatatttgtagtcttcatgtgctaaattaattgttgacaggaacccaagcaaccatcttaatattcattggttgcatgcatatagttccttgattttgttacatgggagatgagtaatttctccttggtcttggtgacaaaagaaatatgtcttacatttgaggatggacggagtattaactattataaatttaataaatggatttatttgatttttttaagaacttctatatatttcacaaaacgcatcgtttagcagtttgggaagcatgttgacggaaaacgaggaagttgttgtttcaagttgctgaaaagaactcaacctcaaccttagacccataaacacatgaatgttagccttctgctcaaaaaattcatgattattaaccttggggctaaaaatgtatggattataacctttgaccccaaaacaaatgattaatagtcttcaacccaaaaaaaattgtgagtattaatttgggccaaaaacatatgaatattattagcctttggccaaagtgcacatgagtattagtcttgggcacaagtattatcactggggccaaaaacacatgaatattagcctttggcccaactacacatgagtatcagtcttcagttcaaaagcacgtgaccctaataccttcagctgaaaaacacgttactatttgccttcagcccaaaacttcgtgagtcaaccttgggcccaaaagtgcatctatattagcctttgacccaatgactcatgagtagcctttagccaaaaacagatgaattttaacctttgtgcacacagtttaatgagtgttgacccagggcccaaaaaggctttgcgttcggcccaaaatgggctgtttttcacagtttaacagtttaagatataaatagaacttgcgtacctattgctaattttaccactgcttggtagattgaaaccttgaagctgaagctgaagcccagtatattctgggacacattcatttcctacttaattgatagacctacactaatgggatgtgaccatgttgcgttacatatacttataacctcaatttattttaagtagtataagatatgaacattttctatttggaacatcctatggaccctcaccctctatgtaggcatccctcatatatccttttctcaaggtctactggaaaactcagcgcgcatactttttctttgggtggttactgcgatccgttgcttagtatagtatctgatggacttatgtttcaggtaacattgctttcaagaattcatcatagaaacctggtgagcttccttggttacagccagcaagatggtaaaaatatacttgtgtatgaattcatgcataacgggacgttaaaagaacacctccgtggtaagttcctatggtcctaccatctgatgataaatctagtttgcagaatcaacaccaaattgtcgttgtgtagagaatgattcttctacaagtaaatgttccatgcgtagttatattttagaatattagggtctccatgatttcgtatggtatctcattatctcctcccctcatacagtaattattttgagaaattttttggagtcatatgcatagtttgtgcagtggtttccacgattttatcagattggtacttttcacctgatatttccctagataatacagcaaattcatgcttgagttttctttttccagttttggataaggattcgtgttctgaaaaacttataggatcttcactgatgtataagccttttcttttctgttctgatgtttacttctttccagtcttaactaagaactgaatacaaactgtcaagatttcagaagtttccatactacacataaatcaaggctcagctgcggctttgtctacttgtctagctcgtgcatgattctttgacactgaggctcaggattgacatgaactttatcatactttgacaggaggccctgatgatgtaaaaataaatagctgggtcaagcgtcttgagatagcagaagatgctgcaaaaggtttatctccctcccttcctcgtgtacaattttcctgtgattattctaccaacatgcatttcaaagattctgaagtctttcatttccatgaaaaataaaataaaatatcaggaatagagtatctccacacaggatgctccccaactatcatccacagagacctcaagagcagtaacattctccttgacaagaacatgagagcaaaagttgcagactttggcttgtcaaaacctgttgtcgacgggtctcatgtatcaagtatagttagaggaacagttggatatctggacccagagtaaggccatgtctttcctgaaatttatgaagtctattcttgttatcaatggccttgcaaattgaattgctatatacctttgtaacatctgatgccaagtgttccccaagctcaccctttttgcgtgtgctcgtaggtactatatctcgcagcagctaacagagaagagtgatatgtacagttttggtgtcattttacttgagctaatctcaggccatgaaccaatctcaaatgacaactttgggctccactgccgtaacattgttgaatgggtaagaagtagtaggccttatgatgatacatgaactttgcatttagtctttcttcctgatagtgaattatcaaagatatccgagcgattggcgcagacaaagatgctgagtgaagagttgtccattggcaggctagatcgcacatggagagtggggatatccacggcatcattgatcagtcgttagacgcagggtacgacctgcagtcggtgtggaagattgcggaggtggcgacgatgtgcgtgaagcccaagggggtgctgaggccgtccatctcggaggtgctcaaggagattcaggacgccattgccatcgagctgcaacgggagctgccctccagcattcaccacctcatgtccaagacgtctccctccgaagccgtcaacacgacaggcagtctgcaagacctggagcagaatgcgtcgtttgatgagctgctcatgcgcccaggtctcaggtagaggtagcacatacggattacagactcttctaatactatatttctaatattcgttgataggttaagcaagctgtgcatgacttgtttagatttgccaccgagcaacgaattttgggtgaatttgtccttcaggtcgtcgtgcacttttgaaatgatcatgtgcattcattctcgttcattctt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0102500, RefSeq:Os12g0102500