Os12g0103000

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Revision as of 10:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0103000| Description = Mitochondrial substrate carrier family protein| Version = NM_001071773.1 GI:115486867 GeneID:4351248| Length = 4525 ...")
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Gene Name

Os12g0103000

Description

Mitochondrial substrate carrier family protein

Version

NM_001071773.1 GI:115486867 GeneID:4351248

Length

4525 bp

Definition

Oryza sativa Japonica Group Os12g0103000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:135532..140056

Sequence Coding Region

135627..135983,136564..136797,137118..137196,137268..137383,137847..137991
,138177..138594,139315..139966

Expression

GEO Profiles:Os12g0103000

Genome Context

<gbrowseImage1> name=NC_008405:135532..140056 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:135532..140056 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccgggtcggagcaccccatggtggccgccgcccgcgccgccctcgcccacctccaacttcccttgccccccgcccccgccggatccaatatggatcatcatcttcttcctcatttcctccacaggtctcccccctctccatgcttcctcctcctccgcacccaacacaagcctaaaccgccgcagccgcagctccacctccttctctgcactgctttcgattccctggcccatagcctgcaggaggtcctggacaagcacaaaccaaagctacatctggacacattattcctccatggaaacctccctttcgcaaaggttggggtaccgccgcctcccccgccacccgcacccctcctctccccaccgtctgtctccgcccaccaccaacaccaacctgcaactccaactgaaaccgaaaccgaggacactgctgctaatgactctccaccaccacggaccctgcctgttcgcctgctcaacatccctgttgaccgcctacgctccacactttccacactttcactcaccgagttgattgacctagttccacacctggttgctaggtccttgccatcccctgatactcatccagacaagaagaaactcttctctgtacaccacttcttccgatatgcagaatttgaaggaaagcgattctttgaggagttagacagagatggtgatggtcaagtcaccctggaagaccttgagattgcaatgagaaagaggcgattgccaaggaggtatgctcgggattttttacggcgcaccagaagtaacttgttttcaaaatcaattgggtggaaacaatttctatccttgatggagcagaaggagccaacaatattgcgggcatacaccaccctgtgtttgagcaagtctgggacacttcacaaaaatcaaattctcacatctttaaaaggtgcaggccttccggccaatgaagataatgctgctgccatgctgcggtacctaaatgcagattcagaagaatcaatctcctacagccattttcgcaatttcatgctcctgcttccttcagagcgccttgaagatgaccctcggaacatttggtttgaagctgctactttggttgctgttcctccaccggtagaaatatcaactggaagtgttctgaagtctgctttagctggaggtcttgctagtgcactttctacctccgtgatgcatcccattgattcaatgaagacacgtgtccaagcatcttctctttcttttcctgatctcatatcaacacttccacaaattgggctccgaggactttatcggggttctatccccgcaattcttggtcagttttcaagccatggtttgagaacaggaatatttgaggcaagcaagcttgtgttaaaaagtgttgctccaacactttcagatattcaggtgcaatcactctcttccttctgcagcaccatcctgggaacagcagtccgtataccttgtgaggttcttaagcagcgtttgcaggctggaatcttcaataatgtaggggaggccattgttggtaccatgcaaaaagatggtccaaagggcttcttccgtggcactggggccactctttgccgagaggttcctttctatgttgctggaatgtgtctttatgcagaagctaaaaaggcggcacagcatgtgttgaacagagacttggaaccatgggaaactattgcagtgggagcgttgtctggagggcttgcagcagttgtcacaactccctttgatgtgatgaagactcggatgatgactgctccaccaggcaccccagtctccatgcagttgatagttttctccatccttcgaaatgagggacctctcggactgttcaagggtgcgatcccccgcttcttctggattgctcctctcggagcaatgaactttgcaggctatgagctcgccaagaaagcaatgatccaaactgagagtgactccgcagactctgtacatgagaagagaaccacagtgggttccagaggatga</cdnaseq>

Protein Sequence

<aaseq>MSGSEHPMVAAARAALAHLQLPLPPAPAGSNMDHHLLPHFLHRS PPSPCFLLLRTQHKPKPPQPQLHLLLCTAFDSLAHSLQEVLDKHKPKLHLDTLFLHGN LPFAKVGVPPPPPPPAPLLSPPSVSAHHQHQPATPTETETEDTAANDSPPPRTLPVRL LNIPVDRLRSTLSTLSLTELIDLVPHLVARSLPSPDTHPDKKKLFSVHHFFRYAEFEG KRFFEELDRDGDGQVTLEDLEIAMRKRRLPRRYARDFLRRTRSNLFSKSIGWKQFLSL MEQKEPTILRAYTTLCLSKSGTLHKNQILTSLKGAGLPANEDNAAAMLRYLNADSEES ISYSHFRNFMLLLPSERLEDDPRNIWFEAATLVAVPPPVEISTGSVLKSALAGGLASA LSTSVMHPIDSMKTRVQASSLSFPDLISTLPQIGLRGLYRGSIPAILGQFSSHGLRTG IFEASKLVLKSVAPTLSDIQVQSLSSFCSTILGTAVRIPCEVLKQRLQAGIFNNVGEA IVGTMQKDGPKGFFRGTGATLCREVPFYVAGMCLYAEAKKAAQHVLNRDLEPWETIAV GALSGGLAAVVTTPFDVMKTRMMTAPPGTPVSMQLIVFSILRNEGPLGLFKGAIPRFF WIAPLGAMNFAGYELAKKAMIQTESDSADSVHEKRTTVGSRG</aaseq>

Gene Sequence

<dnaseqindica>4074..4430#3260..3493#2861..2939#2674..2789#2066..2210#1463..1880#91..742#gtggcctcttcttcctcctccgcggccggggacggggaactaccccccgccggccgccgcaaatcctcctgctcgtcgtcgtggtgagctatgtccgggtcggagcaccccatggtggccgccgcccgcgccgccctcgcccacctccaacttcccttgccccccgcccccgccggatccaatatggatcatcatcttcttcctcatttcctccacaggtctcccccctctccatgcttcctcctcctccgcacccaacacaagcctaaaccgccgcagccgcagctccacctccttctctgcactgctttcgattccctggcccatagcctgcaggaggtcctggacaagcacaaaccaaagctacatctggacacattattcctccatggaaacctccctttcgcaaaggttggggtaccgccgcctcccccgccacccgcacccctcctctccccaccgtctgtctccgcccaccaccaacaccaacctgcaactccaactgaaaccgaaaccgaggacactgctgctaatgactctccaccaccacggaccctgcctgttcgcctgctcaacatccctgttgaccgcctacgctccacactttccacactttcactcaccgagttgattgacctagttccacacctggttgctaggtccttgccatcccctgatactcatccagacaagaagaaactcttctctgtacaccacttcttccgatatgcagaatttgaaggtacatgataccatcttcatcttcatcttcaccttcatttgtcatattctcccatcaccataaatgccttatgcactgtaacctcgtttgttaattattactggcctataatggacacacttgattgatatcctttttgactctctacacctcaattctttttagcaatacagccaatactgtacctcagtttgaacaatattgttcttgtctcatgacatctaataacatgatagcattgttatgtcaataagacaagtcactaattctaacaaccgtaggataaatgctgaatttagtttcttacaaagattcacatggttttgttcaagtacgcagatataggatatggtgttttctctaactcagtattcttctggttttaccgagaaaatgcatgcagtatgtgttacttaaatattaccagtcctcaaccttattacttccagcacaacatgattgtagtatcttatttcttttgtgcgttcatacgcactacttcagactcttcagattcagaatatgcataacacaattccccaatggtgtacaatcatgtacagataactagagctccagatattggcttgatgctgttggtatgacattgatatcactgaaatattatgtctgatgatgttactttgttgttctattggaaatagatggaggtaactcttgcatgttgatatcctaagctcttttttgttgcttctgcaggaaagcgattctttgaggagttagacagagatggtgatggtcaagtcaccctggaagaccttgagattgcaatgagaaagaggcgattgccaaggaggtatgctcgggattttttacggcgcaccagaagtaacttgttttcaaaatcaattgggtggaaacaatttctatccttgatggagcagaaggagccaacaatattgcgggcatacaccaccctgtgtttgagcaagtctgggacacttcacaaaaatcaaattctcacatctttaaaaggtgcaggccttccggccaatgaagataatgctgctgccatgctgcggtacctaaatgcagattcagaagaatcaatctcctacagccattttcgcaatttcatgctcctgcttccttcagagcgccttgaagatgaccctcggtatgttgatgtcttgcgttagaatccatgtttgcatctttgaaccattacacaataaccctttcctcatctaaattgatatctgaccagtcatgaaaataataacatgttcttgactatcttctcatggcattagatactaacctttccacttaactcatttattcacttgtgaatgcatttaggaacatttggtttgaagctgctactttggttgctgttcctccaccggtagaaatatcaactggaagtgttctgaagtctgctttagctggaggtcttgctagtgcactttctacctccgtgatgcatcccattgattcaatgaaggtacacaaacttgttactttttaacccttttagtgtaaacaacttaaccgatagcactgattcaacagtgtgttcacttgatggcatttgttagaagaggatgtcttaatgacagagcaaataaaatccaacatactaaattttagataattatgacaaacaccatctgcttctagcaggttccatgggaatatcatgggatgcaatcaaatagaaatttatacaaagcatactactggcaggagctttttatttgtactatttctttttccagtttttcctctatgaatgatcgcccttcactcaaggcattacctacaatgaacttgccttactttttttagaaagtcgataatgaatttacttgctagattttatgctaatggattttttttttgcttgagaaattcaacagttttatgatatttctgattcaagctctttattttctaaactgtatcagacacgtgtccaagcatcttctctttcttttcctgatctcatatcaacacttccacaaattgggctccgaggactttatcggggttctatccccgcaattcttggtcagttttcaaggttagtgtcgattcagagttttagaggcaaatttgaatgtaggctgcatattcacatcctgccatttgcagccatggtttgagaacaggaatatttgaggcaagcaagcttgtgttaaaaagtgttgctccaacactttcagatattcaggtatgctttcctattccttgtgcaaaattttgcatgtgctactaactgtgtcattggcatgggtatgtggaatcccatacccaccttgtcagtctcaacaacagaaaatgtaacctgtgtcaagccctctgctacattagttatggcttttgaccaatcttagttcatcaagagctaattattctcagaaaattgagagctgagtctagtcatcatgaaacttgtctgcctcaatgaacttaaaattttttgacctagtatattggccgagaaaatgttgcatatatgaaaatctgatgatagacatgtttgtttcgcaggtgcaatcactctcttccttctgcagcaccatcctgggaacagcagtccgtataccttgtgaggttcttaagcagcgtttgcaggctggaatcttcaataatgtaggggaggccattgttggtaccatgcaaaaagatggtccaaagggcttcttccgtggcactggggccactctttgccgagaggttcctttctatgttgctggaatgtgtctttatgcagaagctaaaaaggtattgtgagttcttattgtttctttggaccataccttaaaattggttttcttccatctatattttgttgactgaaaggtgcagtgagctgcctttgtttaatgcaagcgaaaactacttgtactttgtttttattcctcccaatcttaatgaaatttgggcgccggttccttctaccgacccggcaaaaaaaaaatctgttctgcatatttgaatttcatgcttctgaaatggcatctcaatggagtttttcttctatccacctgtctatcaatgatgtcattggactgaattatttggcttgttttattttcctcaaagattgcccacagtaaggttgttttgttttcttctgcatgtattacttttctctgatcactatttttcttaagaagtttaattttgttcgactggatatacaaaatacaaaaatatagttacggggaagttgctgaaccttttcttttaatggactgagatctgtataatatctagttctgttgcaatgccattagattcagaactatgccctgtgccttgacgaatttaatgatcatgtcatatgctcttgttattgtaggcggcacagcatgtgttgaacagagacttggaaccatgggaaactattgcagtgggagcgttgtctggagggcttgcagcagttgtcacaactccctttgatgtgatgaagactcggatgatgactgctccaccaggcaccccagtctccatgcagttgatagttttctccatccttcgaaatgagggacctctcggactgttcaagggtgcgatcccccgcttcttctggattgctcctctcggagcaatgaactttgcaggctatgagctcgccaagaaagcaatgatccaaactgagagtgactccgcagactctgtacatgagaagagaaccacagtgggttccagaggatgacagatccaaattcacctggttactctatatggtgtaaagaaaggacaagccatgcaacagaaatgtttttgcccttgttgcaaagaattagaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0103000, RefSeq:Os12g0103000