BGIOSGA020111

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Revision as of 03:03, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020111| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020111, complete gene.| tag = OsI_204...")
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Gene Name

BGIOSGA020111

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020111, complete gene.

LocusTag

OsI_20471

Ensembl Transcript ID

BGIOSGA020111-TA

Ensembl Protein ID

BGIOSGA020111-PA

Length

6975

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25920904..25927878

Sequence Coding Region

25920904..25921090,25921238..25921346,25923421..25923479,25923926..25924007,25924148..25924268
,25924368..25924409,25924538..25924780,25926338..25926445,25926548..25926745
,25927672..25927878

Genome Context

<gbrowseImage1> name=IndicaChromosome05:25920904..25927878 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:25920904..25927878 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCCGCGCAGAAGCGGCCGGCACCGGAGGCGGCGTCGGCTCCAGCGGGGGGAGACGGGCACGTGGAAGGAGGAGGTGCTGGTGGTGGTGGTGGCGCGGACGAGGACGCCCACCGCGGCGGGGAGCGCTCCCCGAAGGTGATGAACGGTGGCGGGCCGGAGAAGGAGAAGGAGCGGCGGGACGCTGATTCTGATGCGGAGGAAGAGGAGGAGGAGGCCGGCGGCGGCGGTGGTGGTGGAGGGGCCGACGAAGACCGCGACAGCCCGTCTTCGGAGAGCGACGGCGACATGGACGAGTTTATACTAGTGAAATTAATGGATATACGGAAAGAAGTGCAGTGCCCTATATGCTTAGGCATTATCCGGAAGACAAGGACAGTTATGGAGTGTTTGCACCGGTTTTGTAGGGATTGCATAGATAAATCCATGCGACTAGGAAATAATGAATGCCCAGCATGCCGCACCCATTGTGCAAGTAGACGTTCTTTGAGGGATGATCCTAATTATGATGCTTTAATTTTGGCTTTGTATCCAGATATTGACAAGTACGAGGAAGAGGAACTTGCTTTCAGCGAAGAGGAGAGGACTCGCAACAAAAAGATCCAAGCATCCATCGCTGAAACATTTCGAAGACAATCAGAAGCACTCGTGAAGAAGCGTTCCGTTGCAAAAGCAACAGGTTCAACTATTACGAGAAGGACCAGGGGTAATATGCGCGCAAAAAGGAGGGGACGAACTAGTTCCCCTGATATTGTTGCAACTGACAATGAGGATGAGGATAGAGATGAAAATGGCAATGAGGGCAGCAAAGAGTCGTCTTCTGTTGATGACCGTTCCCCAGATTTCAACTTATATCTTGTTCTACTTCCACTTAATGGACAAAGCATGCCTAAATTGGAGAAGCCCTATCTCAGTTGCCAACCGACATTCTCTGTTCGCCATCTTTGCCAGTTTGTTGCTCTCCAATTGTCTCGCCATGCGAAAGAAGTGGAGATATTCATCAGGAAGAACCCCAACAATGGATGCTTTGCATCCATAGATACTAGTGCAGATGAGATAAAACTGAATCATGACGCCTTAGAAAGATTGGAGGAAGAGAAATCTCTTTCAGAGCTGTACCCTTCACTTGCCTCTGGCCATGGGGATCTGGCTCCATGGACTCGGTACGGTGCCTTGAACAATGAACAGATGGTGGGTTGCAGGAAGAATCGTGAAGTGATCAAGTCGCTGTTGACCGGTGCAGGTCTGACCGTCTGCCATGCCATGTTACCGGTGAAAATAAGCGACTGGCCTTCGACGCTCACGCAGTCCCGCTGCCAGTCAAACTGGCCGATGAGTTTGGTACTTGAGATTTGA</cdnaseq>

Protein Sequence

<aaseq>MPAQKRPAPEAASAPAGGDGHVEGGGAGGGGGADEDAHRGGERSPKVMNGGGPEKEKERRDADSDAEEEEEEAGGGGGGGGADEDRDSPSSESDGDMDEFILVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALILALYPDIDKYEEEELAFSEEERTRNKKIQASIAETFRRQSEALVKKRSVAKATGSTITRRTRGNMRAKRRGRTSSPDIVATDNEDEDRDENGNEGSKESSSVDDRSPDFNLYLVLLPLNGQSMPKLEKPYLSCQPTFSVRHLCQFVALQLSRHAKEVEIFIRKNPNNGCFASIDTSADEIKLNHDALERLEEEKSLSELYPSLASGHGDLAPWTRYGALNNEQMVGCRKNREVIKSLLTGAGLTVCHAMLPVKISDWPSTLTQSRCQSNWPMSLVLEI</aaseq>

Gene Sequence

<dnaseqindica>1..187#335..443#2518..2576#3023..3104#3245..3365#3465..3506#3635..3877#5435..5542#5645..5842#6769..6975#ATGCCCGCGCAGAAGCGGCCGGCACCGGAGGCGGCGTCGGCTCCAGCGGGGGGAGACGGGCACGTGGAAGGAGGAGGTGCTGGTGGTGGTGGTGGCGCGGACGAGGACGCCCACCGCGGCGGGGAGCGCTCCCCGAAGGTGATGAACGGTGGCGGGCCGGAGAAGGAGAAGGAGCGGCGGGACGCTGGTGAGTTCCCAACGACGACGTCGTCCCGGGCGGGCCCCCGGTTGCGGCGGGAGCGGGGCGCCGACGACTCCGCGATGCGCGCGCATCGCGTTCTCTGTTTCGGTTCGGGTGTCGCTGAGTGGGTTCTGTGTTTGGTGGGCTTGGCAGATTCTGATGCGGAGGAAGAGGAGGAGGAGGCCGGCGGCGGCGGTGGTGGTGGAGGGGCCGACGAAGACCGCGACAGCCCGTCTTCGGAGAGCGACGGCGACATGGACGAGTAAGTAAGCCGTGGAACTTCCCTCTGCTCTCTCTGACTCCTTCCCCCCCACCCTCTCCCATCTTCCTGGCCCTGGGCTTCCTCTGGCCTCCGTCACGATTTGGCGTCGTCATCGCGCCGCCTCCCTCCCTGCGTGGTACCACTGGTTTGGCGGGGTGGCGGAGGGGGGCCGCCGTCGGGAGGTGCCTGGCGTAGCGAGCGGACGTCGTGGGGAGGTGCCTGGCCCAGCCGGCGGCTGCTTTGTTCGTACGCGTCGGCGTGAGCGCTCCTGCTGCTGCGTACGAGCGGTGGGATCTTTCGTGGTTTCGTGTCGGCTCATGTGCCGGCGGCGGTCGGTCGGTCCCTGTGAGTTGTTCTCGTTCGGCGAGCTGGCAGCACTGGCGGTTGCCGCGCCGCCTCGTCCCGCTTCCATCGCCGCCGAGGCATGGGATCTTGCCGTAGCATGCATGCTTTCGTCGTGTCGCGCGGCTCCGACGAGGCGCCGTGCTCGTGACGGCAAGTGCGGGGAGCGGCATCCAGGGTGGACCGCCGCGTGCCAAAGCTTATTATCATGCCGGAGCCGCCTGCGGCATCTGAACCGGCAGCCCTGCTCATCTCGGTTTCAGCTCTGTACTCAGTTCGCCGTCCTTCTCTCCTGAATCGTGCGCGACGACGGTCAACTCTATCGTGTGCTTGGGGCTTGTTAGTGCTGGCCTGACATCCAGGATCGCAATGATCTTACCATGCTTAGGCGCCCGTGCGAGCTCCACAGCCAGTCTGCTGCCCGTGCACCTGCGTAAGTTCCATGGAAATGCCAAGCTCTCGATGACAATAGGCAAATGGCATCGTCTAGCCAAGATCTCCCTATGGCGTTATCAGTTGTGTCACGTTTGCTGCCTTCGTCTGTACTGGGTACCTGTTCGTCATGTTTCCTTCAGTGCACTGGAAGAGTCCGTGTTTTTCTTGGTTATGAACTGTGATGTCAGAATATGAGTTTCTGATGTCTTTATTGCTATATCCTGACCTCTATGGCTGCCATCAGTCTTACACTGTTCCATTGCCTTAACTAAGCTTGTGGCACCAAATTGTTGCCGATCTCTCTCTTAGGCTCTATGACATATCATATAATTTACTATTCCATCTTCTGTTCTTAAGAGTCTTTCCTCTGCTCCTCCTCCAAAACCGTAAGGATCACTGCATAGTAGAGTAGATCAGAGTCCTTTTATTTTCTTTCCCCCGTTTTGAACTATGAATGCCTGTGCTCTGTTGTTAACTGTAGTTATTAGGTGCAAAACTTGCCCCTCAATAACACTATGAACAGTGCAATTTCCACTTAGAAAAGCATATTGCTATTAGAGATGCTTGATAGATCCTGATACGCACATTGTCACATTCACTCCCAATAGGTTTGCAGGCATAGTTACTTCAGTGTTTTTCGAGGGAGCCAATGCAGGGGTAGTCTTTTTACACCTTCTATAATAGTTGGTCCTGCATAGGTGCCTGCTTTGAATGTAGAAGTGTGCTTATTCAATCTGTCAAATGAGTCGACAAGTTTTCACTTAAGATTCCTTTTAAGCCCACTGCTGTTAATTGTAGTTGTTAATTGCAAAATGGCCCCTCAATTACACTATGAACAGTGCACATGAAAATCATATTGCTATTAGAGATGCTTGATAGATCCTGATACACACATTGTCAGATTCACTCCCGATAATTATGCAGACATAGTTACTTTAGTGTTTTTCGAGGAGCCAATGCAGTGGTTTTTTTTAGACCTTCTATTGGCATGTTCTTTTTTATATATAAAATAGTTGGTCCTGCATAGGTGTCTGCTCTGAAAGTATGCATTTTCTTTTTAGTCTGTCAAATATGAGTCAACAAGTTCTCACTTAATATTCCTTTTTAGCCTTCTGGTATAATCCTATTATGAACATTGCCTTCTAGGCTTCCACGAATGGTAACTATTTTCTTCACAGAAAATAATCTTGTTGTACACTTCTCTCTGAAACCGATGTGATGATGGATAATGAATGACTTGAATTTGCTGCTAATCAAAGCTTGAAACTGATGTATGAATATTGTTTTTCTCATACAGGTTTATACTAGTGAAATTAATGGATATACGGAAAGAAGTGCAGTGCCCTATATGCTTAGGTAAGGATGTGCTTTTGTCTAGTTACTTTCAGATCTAGAGAGAATATATTTACATTGTTCTGTGCATTTTCCTCTTTACAGCTTTACTTGTAATTTGATTCAATGTTATTATTTGGATGCTAAGTTTTTCTCCTACTATCTACTATAGAAGGTGAAACCATCAAAGTCAATGATCTACATGTTTTTGTAATGCAAGTATGCATATAGTTATTGTCCTCTGATAAATAAGGAGATATATAGAGAATATTTTACCTGATTTTACTTTGAAAAAGCTACATTAAGAAGCTTATATTCTTCACATGTTGCAAAATTTTATATAAGTGCAACCAGCTAGTTCTAATTATGAATCTAGGCTGAGCAAGATTCTCATATGTACAACTCTAAGTAGCACCTCTGTGCAAACTGTGCATACCTGATCATTTGCTTGTCTTATGGTCCTATTGCAGGCATTATCCGGAAGACAAGGACAGTTATGGAGTGTTTGCACCGGTTTTGTAGGGATTGCATAGATAAATCCATGCGACTAGGGTATGGTCTCTGATATTGTTATTGTCTAAAATGCTGTCAGTGTCATTTTCAGAAAGTTGAGATGTAACATGACTGGAGTTTCAAAATCCAAAGAGATACTTCATTCCTATGATAATCTAAGCAATGCTGTGTTTTTGCAGAAATAATGAATGCCCAGCATGCCGCACCCATTGTGCAAGTAGACGTTCTTTGAGGGATGATCCTAATTATGATGCTTTAATTTTGGCTTTGTATCCAGATATTGACAAGTACGAGGAAGAGGTGATGCATAAATTCTCCAATTAGACACATAGTAGTTTAGTTTATTTAGCTTCCGTTTTAGTTCCGGTGCCAAGGATTATAATTTGCTTGATACTACAGGAACTTGCTTTCAGCGAAGAGGAGAGGACTCGCAACAAAAAGGTGGGGTTATCTAGAATTCTAGATGGAACCATAGATGCATTTGATGTTTAAAGGAAATAATTTCCCCTGCCCATTTATAAGTTGTCTCTTTATATTGTTATTGACATTGGTTTCATTTCTCATGGAAGATCCAAGCATCCATCGCTGAAACATTTCGAAGACAATCAGAAGCACTCGTGAAGAAGCGTTCCGTTGCAAAAGCAACAGGTTCAACTATTACGAGAAGGACCAGGGGTAATATGCGCGCAAAAAGGAGGGGACGAACTAGTTCCCCTGATATTGTTGCAACTGACAATGAGGATGAGGATAGAGATGAAAATGGCAATGAGGGCAGCAAAGAGTCGTCTTCTGTTGATGACCGTTCCCCAGATGTAAGGCAGAAAAGAGTTCGGAGGTGGCCCGTGCCACGATCATCCCCTGCTAAGAGCATTGGGGGTATTGATAGTAGCTTTGAGGATATTGATGACTTAGGAAGTGGCAGAGATATCATGAGTACTTCTCCACTACGCGGAGAGATGCTTGCCTGGGGAAAAAATGGCACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGTGGCGCTTTGCAGGTTTGGGCGGAGCAGGGGTGGGGCCCGGCTAATCTGGGGGTGGTTGTTGCGTTGCGGGCGGCTAGCCTGTTCGTGCGAGGCGAGGCCACGGCCCGCGCGTGCCAGACGTTCGGCCGTACGAGTGGGTGGGTAGGAGTAGTGGGTTGATCGACACGACGACATGGACGGCTTTTGGCTGCTGCGTAATGTGTGTGGGCGCGTGGGGCCGTGGGCGACTACGCAAAACGTATGCGTGCACCTGAACCAGAAATCAGTCGCGTCTGGGTCAGGCTGACTATTTTTTTGGGCGAGCTAAAGGCACGGCCTGAAATGTGTATCCGGTACGTAGCTGAAAGCAATTTCCTGTTATTCTGCAAGGGGATCCAATGGCCTGAAAGTGATCAATCGATGGCGCTCGCCGGCTCGCGAGATCCAGTCCGTTTTCCTTTTTTTTTTTGGCTTAGTTTTTTTTCCTTTTCTGGCCTTGGTTGTTTTTCTTTTCGAGCATGCTTTTTTTTTTCTTTTTAACTGGGCTGAATCCTAGTGGGTGGGGATATCTAGCACCTTATAACATACGTATTATTTTGTTCTTTTTACAAATTGTTTCAATTTTAGACACAAAAGTTTATATGTAGTTACGTACAAAGTTTTATTTTTTTTATAAGTTTACCTGTACACCTAAAGTTTGTACACTTAAAGTTTATAGGTCAAAAGTTGTATATAATGATTCAGATTCAGATTAAATATTTTTATATAAAAGGTTGTTATATCAAAAGTCTCTATAATAAAGTTTATGTACATAAAGTTGCATTGTATATATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATACGATGAATTCGATAATAAGGTAAAAACAGTACGTAACATGCAGTAATATTCGAACTTCAAAGTTCCATCTACTTTTTTCTTTTTCCATATGGGATATGCCTGGGTTCCTTTAGTCAAATATAATTGAACAGATTACCACCTTCTGTCTTCTATTTATTCTTCAGGAGATACAGAGGTGCGAAGGGGACTATAATATATATACATTTTAGAAAATAGGTCATTTGGACCCAGCTTTTATAATAAGCTAGGACTATGATATATCGCATGGCATTTCTTGTTTCTTTGCATGCCAGATGTGTCCCTGTGTTGTGTCTCACAGTGTGCTTTTGTAGTGCCATGAATGCAATATACGTTACCGCATGCATGAACTTGTGCAAGTTATTAGGAGGGACCTGATAAATTGTACATGGAGTCCATGCCTCTTATCCATTAGGTTTGCTGAACTTTTTGTTTGTGTTTTGCAGTTCAACTTATATCTTGTTCTACTTCCACTTAATGGACAAAGCATGCCTAAATTGGAGAAGCCCTATCTCAGTTGCCAACCGACATTCTCTGTTCGCCATCTTTGCCAGGTGATCACTTGTTTAATGTATACTATTGGTTGGTTCTTAGGCAATTTTAGCTTACCTGGCTCAATATGAATAAGCAAAGACTCTACTTCTACAACTTTTCAGTTTGTTGCTCTCCAATTGTCTCGCCATGCGAAAGAAGTGGAGATATTCATCAGGAAGAACCCCAACAATGGATGCTTTGCATCCATAGATACTAGTGCAGATGAGATAAAACTGAATCATGACGCCTTAGAAAGATTGGAGGAAGAGAAATCTCTTTCAGAGCTGTACCCTTCACTTGCCTCTGGCCATGGGGATCTGGTATTCCTCAGTTTCTAATTATGTCTAGCTGTTTACTTTTTCGCTATTGCTTCTTTTTAATACTATATTGTATTGCTTTGTTACCTCCTCCAGGAATTATTATATTCCCTGAAAGCAGAAGTGTAGATCAAATTAATGGCACAAGTTCTCCTTCAGTATCAATCTGATCAAATAGCGGGGAATATGATGGCATGCAGGGATCATCCGATGAAAGCCTGTACAAAGTTATCCAGTATAGAAAAAGAAAAAAGAGAATCAGCAAACTTAGCTCTTCCTTAGTTGTGACTCGTTAAATTTGCTCTTGGTCTTCTGATATAGTACATGGTTCATTCATTTAAATTGGAGGAATTGAAATGCATGGGTGGATGGAATTAAGTAGCAGTCGTAAAAGAAGGCCAAACATATAGTCTGGTGACTGCTCGTTGTGATATTGGTGTTGCCTGTCCAACTTGAACTGATTTTTAAATGGAGATATCAACTGATTTAACTTGGTAGCTCGATTCCCAGATGGTGGAATCGCAATTGCTCCCATTTCAGTTTGTTTTCACGCTACTCCTTTAGTTTGTTTTCATGTTACTCCTTTAATACCAGATAAAACATATCTTAGTACTACGAATTTGGACATGTCTCGATGTGCAGATGGTGGATTTGCAATTGCTCTCATTTTAGTTAGTTTTTATACTATAAATCTGAACAGAGGCAAGAATATCTTTAACTTTAATCCAATTCTAGGTTTTAGATTCTGGGAAGGTAGTAGTATCTTGCATTGCAGTAAAGACGTGCATGCCTTCACTTCTGATGTCTGCATGCATCGGTGTTTCTTTTCTCCCCATTGCAGAATGACAATACGCCGTACACGCATCAGCGGATCAGATTTTGGAAGTGTTTTCTGGGTCTTTGTCAGCTTTGAGTCTTTGACAATGCAGGCTCCATGGACTCGGTACGGTGCCTTGAACAATGAACAGATGGTGGGTTGCAGGAAGAATCGTGAAGTGATCAAGTCGCTGTTGACCGGTGCAGGTCTGACCGTCTGCCATGCCATGTTACCGGTGAAAATAAGCGACTGGCCTTCGACGCTCACGCAGTCCCGCTGCCAGTCAAACTGGCCGATGAGTTTGGTACTTGAGATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020111

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020111&oldid=48867"