Os12g0103450

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Revision as of 10:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0103450| Description = Peptidase C48, SUMO/Sentrin/Ubl1 family protein| Version = NM_001189817.1 GI:297728764 GeneID:9267630| Length = 3322...")
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Gene Name

Os12g0103450

Description

Peptidase C48, SUMO/Sentrin/Ubl1 family protein

Version

NM_001189817.1 GI:297728764 GeneID:9267630

Length

3322 bp

Definition

Oryza sativa Japonica Group Os12g0103450, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:165056..168377

Sequence Coding Region

165056..165408,165477..165624,166248,166305..166602,166819..167387
,167554..168377

Expression

GEO Profiles:Os12g0103450

Genome Context

<gbrowseImage1> name=NC_008405:165056..168377 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:165056..168377 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaagcgcggaagcaaaaagaagaccaccgcttccacccgtgctctccctcttctccgacgatcggcaggcgagacggggacggccgagagcaaggaggagaccggcgcggcgtctccgatcaagaacgcgatcaagaacgcggcggctggcgagatggcggaggaggagaagttggccggcgcggcgtctcctctcctccgactccgatcagcccggggagaaacggggacggccatcaagaacgcggcggcggctggcgagatgggggaggaggaaacggcggcgatggggatcacaagaactcgcggggatcaagaaacaccaagaaagaaaaagggaagaagctggaaggagagcaaggccatggatgacggcgcggcggcgctgcgaaggaaagcgcgagagatcaccaaggaagaggaggatgacgaacgtttgcgcggggagatggtgtcccgggttcgagcacggattcgtaagcagcaaccagacgagactaatgatgaagagatacaggcgcatgaaacgtatctgttgcatgacgctggccggggcgccggtgacacctccgaccacccggcggcgatcgccagacctcaagatgttaccacgttccacattgtgggcgtcgtcgacacagatggtgctcgtgttcgtctgctcttcagggacagcgacctatactttgttgctttcaaaactggttcttgctggttcagattcaacgatgaacacataccaacattcctcacgcccactgtacctatagcttacacctcgggctacatgaacattgcgcaagttcgggttggatatcactgtctttatgatatcttcaatgtaatctcaagatacacccctgagtcggcacaagagaagaccaatgagaggcaacggatacttcagtgtgcagctctcatgttgagtgagtcacaaaggtttggccacgtccagctactggtaaagagacagatccacaaaatgatgagtaaaaagattactgccaaacagaacaagaaaatacacagttggggttccatagcacgctactgcatatcccacgaatgcaaagaagacgtcctgcatcatttaagcacattgatcgttctgttcaaccccgatcaaaacaagtatgagaattacaaaatagttggcagaagaaaattgctatctcgagcagctgcagcagcagcagaagcagcagcaagagcagcagaagcagcagcacgaccatcgcaagcagcagcagcagaagcagaagaagaggaagaggatgatgatgatgatgaggatgaatacccatggcaatgccaaacaagagcaggacaggagctcctgattctcctctacgacaaaagattgccgccaccagttactccaatggtggtaacacagcagaagaaccacaagaaaactcaggctgaggaggttgatgaaaagaaaaaccaagagaatccaaacacagatgccactattggcgctccatctggaggtgaaaaccatcagaatcgttcattgatcagctgtgacgggattaacctgtatgaatctgatttggacagtctacgcggcccacattgggtgacagatgcaatcctgggctatgccttggccaaattttcaagagcttactcagatgatggcctactcctggtgcaaccaacgaacgcagcattgctgaacaataaacactatgttgctgccgaggccgaccacttgctacttgctagtcgtcgcctggtcctcataccagtaaatgataatctggatttcaaccaagctggtgatgggaaacactggagcctcttagtcatccacaagaccagtaacgatggtgttatccagttcatccaccatgacagtgtgcgttcaggggataactcatacaatctgcatgctgctcaaaagcttgcaaatgttctgcggggagtgctgcccactgctggagatgttattaacgctgaaacgccccagcagactaatggaaatgattgcgccatacatgttctggctgctgtacaggtcatatgcagatggtggagagccaatgccaacaagagtggcccagctgattggatcaggaaattggacaaaagaatcagtgaaggcaacattacacagatgagggcctccctcctgcaggacattgaaagagactgtcaaaagaagaaatcgaaagatcaatga</cdnaseq>

Protein Sequence

<aaseq>MAKRGSKKKTTASTRALPLLRRSAGETGTAESKEETGAASPIKN AIKNAAAGEMAEEEKLAGAASPLLRLRSARGETGTAIKNAAAAGEMGEEETAAMGITR TRGDQETPRKKKGRSWKESKAMDDGAAALRRKAREITKEEEDDERLRGEMVSRVRARI RKQQPDETNDEEIQAHETYLLHDAGRGAGDTSDHPAAIARPQDVTTFHIVGVVDTDGA RVRLLFRDSDLYFVAFKTGSCWFRFNDEHIPTFLTPTVPIAYTSGYMNIAQVRVGYHC LYDIFNVISRYTPESAQEKTNERQRILQCAALMLSESQRFGHVQLLVKRQIHKMMSKK ITAKQNKKIHSWGSIARYCISHECKEDVLHHLSTLIVLFNPDQNKYENYKIVGRRKLL SRAAAAAAEAAARAAEAAARPSQAAAAEAEEEEEDDDDDEDEYPWQCQTRAGQELLIL LYDKRLPPPVTPMVVTQQKNHKKTQAEEVDEKKNQENPNTDATIGAPSGGENHQNRSL ISCDGINLYESDLDSLRGPHWVTDAILGYALAKFSRAYSDDGLLLVQPTNAALLNNKH YVAAEADHLLLASRRLVLIPVNDNLDFNQAGDGKHWSLLVIHKTSNDGVIQFIHHDSV RSGDNSYNLHAAQKLANVLRGVLPTAGDVINAETPQQTNGNDCAIHVLAAVQVICRWW RANANKSGPADWIRKLDKRISEGNITQMRASLLQDIERDCQKKKSKDQ</aaseq>

Gene Sequence

<dnaseqindica>1..353#422..569#-164889..-165047#1250..1547#1764..2332#2499..3322#atggcgaagcgcggaagcaaaaagaagaccaccgcttccacccgtgctctccctcttctccgacgatcggcaggcgagacggggacggccgagagcaaggaggagaccggcgcggcgtctccgatcaagaacgcgatcaagaacgcggcggctggcgagatggcggaggaggagaagttggccggcgcggcgtctcctctcctccgactccgatcagcccggggagaaacggggacggccatcaagaacgcggcggcggctggcgagatgggggaggaggaaacggcggcgatggggatcacaagaactcgcggggatcaagaaacaccaagaaagaaaaagggaagaagctggtaaaagaggcgatcaagaaacaccaagaagcgaggaaggcgaaggagatcggcggcgcgcgtggcaggaaggagagcaaggccatggatgacggcgcggcggcgctgcgaaggaaagcgcgagagatcaccaaggaagaggaggatgacgaacgtttgcgcggggagatggtgtcccgggttcgagcacggattcgtaagcagcaaccagacgaggtaactaataaaatcatccttttcgatttatttttaatttgatacgaattaattaatgacgatgaatcaatgatgcatatgcactgatccatcgatccatcgggagtattaactgtttgcttcttgtcaataatgagtagtatatatggatatgatatcatgcattagctaatttccacctattgaattagctacttaattagcttgcattatagatatgttaataatttctatctactactcattttaattaggttgcattttatatagatatgttcttaatttcgtttaatttctttccgctagctttctccgatcacgtacgtactactgctactgcatgcattaccattttaggagtactagctagctactagtagtattataatattggtgcgtcaatcaattactagctcgatctgcactagtaatacttaatcaattagtgtcgtctcctcgcctcgttcgctctattatacatggatgcatgcgtactatactcacaaacgtaggcatgaatattaaattaactcgctgcatgcagtagccagtagttgcatgtagcattttaaattccaactctcgatgaatgaatgaaattaagaaataatgaatgaatgcagagtaagttggatgcgttctccattggcgtcaacgctaatgtgcgatcgtaccacaagctaatgatgaagagatacaggcgcatgaaacgtatctgttgcatgacgctggccggggcgccggtgacacctccgaccacccggcggcgatcgccagacctcaagatgttaccacgttccacattgtgggcgtcgtcgacacagatggtgctcgtgttcgtctgctcttcagggacagcgacctatactttgttgctttcaaaactggttcttgctggttcagattcaacgatgaacacataccaacattcctcacgcccactgtacctatagcttacacctcgggctacatgaacatgtgagtagtacctctcactcgcctgcctctagctagtatatactactgctatccacattattcaatatatatatgatgacgcattgcatttgcatctctctctctctctctctctctctcttaatgcttgcattctggatacacacacacacactactgcatatgatgatcgacttcactcacagctgacagtttcttcatttttgcatggcacagtgcgcaagttcgggttggatatcactgtctttatgatatcttcaatgtaatctcaagatacacccctgagtcggcacaagagaagaccaatgagaggcaacggatacttcagtgtgcagctctcatgttgagtgagtcacaaaggtttggccacgtccagctactggtaaagagacagatccacaaaatgatgagtaaaaagattactgccaaacagaacaagaaaatacacagttggggttccatagcacgctactgcatatcccacgaatgcaaagaagacgtcctgcatcatttaagcacattgatcgttctgttcaaccccgatcaaaacaagtatgagaattacaaaatagttggcagaagaaaattgctatctcgagcagctgcagcagcagcagaagcagcagcaagagcagcagaagcagcagcacgaccatcgcaagcagcagcagcagaagcagaagaagaggaagaggatgatgatgatgatgaggatgaatacccatggcaatgccaaacaagagcaggacaggagctcctgattctcctctacgacaaaagattgcgtacccaaggccatcaggagcggaggacatagggtccgactgcctccaccgcttcaagctgaagacgagaccaacaagcagaagatgatgattaagaaaaagaatacccaccaccctgcagttccatcatcgtctgataatgtggaagatctccctactgtttcagcgccaccagttactccaatggtggtaacacagcagaagaaccacaagaaaactcaggctgaggaggttgatgaaaagaaaaaccaagagaatccaaacacagatgccactattggcgctccatctggaggtgaaaaccatcagaatcgttcattgatcagctgtgacgggattaacctgtatgaatctgatttggacagtctacgcggcccacattgggtgacagatgcaatcctgggctatgccttggccaaattttcaagagcttactcagatgatggcctactcctggtgcaaccaacgaacgcagcattgctgaacaataaacactatgttgctgccgaggccgaccacttgctacttgctagtcgtcgcctggtcctcataccagtaaatgataatctggatttcaaccaagctggtgatgggaaacactggagcctcttagtcatccacaagaccagtaacgatggtgttatccagttcatccaccatgacagtgtgcgttcaggggataactcatacaatctgcatgctgctcaaaagcttgcaaatgttctgcggggagtgctgcccactgctggagatgttattaacgctgaaacgccccagcagactaatggaaatgattgcgccatacatgttctggctgctgtacaggtcatatgcagatggtggagagccaatgccaacaagagtggcccagctgattggatcaggaaattggacaaaagaatcagtgaaggcaacattacacagatgagggcctccctcctgcaggacattgaaagagactgtcaaaagaagaaatcgaaagatcaatga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0103450, RefSeq:Os12g0103450

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