Os12g0104200

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Revision as of 10:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0104200| Description = Conserved hypothetical protein| Version = NM_001072456.2 GI:297612496 GeneID:4351251| Length = 2525 bp| Definition ...")
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Gene Name

Os12g0104200

Description

Conserved hypothetical protein

Version

NM_001072456.2 GI:297612496 GeneID:4351251

Length

2525 bp

Definition

Oryza sativa Japonica Group Os12g0104200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:203476..206000

Sequence Coding Region

203476..203655,205006..205233,205317..206000

Expression

GEO Profiles:Os12g0104200

Genome Context

<gbrowseImage1> name=NC_008405:203476..206000 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:203476..206000 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccccgtcgcatggtggctactgggtgctcgccacatggtggggggagccgctgctgtggctatggcagccctttcgggcaggaggtggagcaggccccctaggtcacctccttgagatcagtggtggtctgggacggatacgtggatgggcggctatggaggagagaggagatgagcttatccggccatgcgttacacgtttggacgcatcccgaaatcaagttttgctggctgcgacaacggattgcagatcttctcaatcaaactcctcctccgcaacagaccatcagctccagtggccacttcatgtctatggcctcgtcgctaccagggactctcttgatcctaggcgcaaccttctctttaatcgcactagagacaactgccaaatccttactcaacaggatccctttctagtgctaacaggaccgtctcgcgcaattgtcttaattgatcctgttcaatttgaggttcagctcaaagcaaagtccaataacaacaccctgcatgatcatcctgaccaagatcaaattgttaactttggagtggtggattctggctatcttccaggcccaacgaggcattgcatcggcaagcggagtgaggtcgagttcacaatctcagtgcttgatcgatcaattgaggccactatcatcagcgtccagcttgttggtggctcgtcatggccggatcatctccaaggaaagcttgtttcccgtacggccagtgcaattcatcaagaaatcgtgctacttgattctcaaaaacaacaagatggaaaaatgcctatcgatgatggcggcttcattcagctttcaaggcgtgttgtttcggtagaactggctggccaactcatagttcaagtgctggctttcaattcccagcagcaagtagttgacaatgacaacgacaacaagaaggatgagattgttgcaaaacacgagattgtttttgatcctaaggaagcttcattgagtgtggagacgtgtgagctacaactaggaggaggaggaggaggcccatgtaagcttcaaatctctgttgcttggtctctggtcgataggcttccccctgttggctatttctaa</cdnaseq>

Protein Sequence

<aaseq>MSPSHGGYWVLATWWGEPLLWLWQPFRAGGGAGPLGHLLEISGG LGRIRGWAAMEERGDELIRPCVTRLDASRNQVLLAATTDCRSSQSNSSSATDHQLQWP LHVYGLVATRDSLDPRRNLLFNRTRDNCQILTQQDPFLVLTGPSRAIVLIDPVQFEVQ LKAKSNNNTLHDHPDQDQIVNFGVVDSGYLPGPTRHCIGKRSEVEFTISVLDRSIEAT IISVQLVGGSSWPDHLQGKLVSRTASAIHQEIVLLDSQKQQDGKMPIDDGGFIQLSRR VVSVELAGQLIVQVLAFNSQQQVVDNDNDNKKDEIVAKHEIVFDPKEASLSVETCELQ LGGGGGGPCKLQISVAWSLVDRLPPVGYF</aaseq>

Gene Sequence

<dnaseqindica>1..180#1531..1758#1842..2525#atgtccccgtcgcatggtggctactgggtgctcgccacatggtggggggagccgctgctgtggctatggcagccctttcgggcaggaggtggagcaggccccctaggtcacctccttgagatcagtggtggtctgggacggatacgtggatgggcggctatggaggagagaggagatgaggtgacgttgcatgagctcggtgagggcgaagccgctgcctacgttgctcgggggagaggatagagaggagactaggcagccgctcgagcttagtgttggcatcgccgctgctcggaaggtgacgacttgtcgatgcctcgattcatctttaatttcgatagtcaccgccctgtaaactattgggcgcctcgcatcaaactattgttgctattgacagttgcaatacgggggagccgtgacagcggagagacgggcgcaaggcggtagggccgacgtccgccttcccacggacacctgacggtgagctcatgctaggacaaatcaacgttaggtgaaggtgggagtgccaccatcctctccttccttcaccatcaacgcggcgccgccatcctttgtctcttgccgactcgtctattaaggaagggcggttgacgagcttggaacgggaggctggaggaggagagataaagaagtgagcgattaaatgtcactgatatgtggggggccactattacttttttttagaaaaaacattttacttattattagaatgtcccacgtagatgccacatgggttgaagatgaagtcaaccctcagtactgtcccttagggctatatttactttggttttggaagacgtgggattttgctgtcgagggacgtgcaattagatagggatgtaaagtggacttgtcctaattaagatcgaagccgaaagttccttggcccagtagatgtgcttaggacacgtccctttctaattacggcccgttccgtggtgaccgactccgatccgaggcgagacgcgacgcgagagagatccgatccgagtagaagaagacagaagagggagatggaagggggaaaaacacaggaaaccctagcttagcagtaccacgcacccacgcgggctccgtcaaatttcatccaaaaaaaaaagtgtttccgcccgcgcggcggcttccctgagagagatcgatcgatcggatatccttgtggattactattaattgttgcatggcaacgaggagaggggatcgaagaaagaagaagagtagtactagtactagtgacggcggggagaggatgatgagggatttattgatgatgcagcgattggaggtggaagaagaagaagaagaagaatcccaagcggaggattatgagattgtgatgttccgccgcgtctggacaagatggcacggtcgtaactttggctccttcgacgataccagtcagtatctacatcttcttctcctctcttccaactccaaaacacaagattaattaatttctattctagcgattaataatccttattagttaacaataatcgatcctatgtgcagcttatccggccatgcgttacacgtttggacgcatcccgaaatcaagttttgctggctgcgacaacggattgcagatcttctcaatcaaactcctcctccgcaacagaccatcagctccagtggccacttcatgtctatggcctcgtcgctaccagggactctcttgatcctaggcgcaaccttctctttaatcgcactagagacaactgccaaatccttactcaacaggtatatattattaacctcttcttcttaattcgagtccattaagaggttgattgactagctcatatatatgctcttaattgcaggatccctttctagtgctaacaggaccgtctcgcgcaattgtcttaattgatcctgttcaatttgaggttcagctcaaagcaaagtccaataacaacaccctgcatgatcatcctgaccaagatcaaattgttaactttggagtggtggattctggctatcttccaggcccaacgaggcattgcatcggcaagcggagtgaggtcgagttcacaatctcagtgcttgatcgatcaattgaggccactatcatcagcgtccagcttgttggtggctcgtcatggccggatcatctccaaggaaagcttgtttcccgtacggccagtgcaattcatcaagaaatcgtgctacttgattctcaaaaacaacaagatggaaaaatgcctatcgatgatggcggcttcattcagctttcaaggcgtgttgtttcggtagaactggctggccaactcatagttcaagtgctggctttcaattcccagcagcaagtagttgacaatgacaacgacaacaagaaggatgagattgttgcaaaacacgagattgtttttgatcctaaggaagcttcattgagtgtggagacgtgtgagctacaactaggaggaggaggaggaggcccatgtaagcttcaaatctctgttgcttggtctctggtcgataggcttccccctgttggctatttctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0104200, RefSeq:Os12g0104200