BGIOSGA020132

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Revision as of 03:04, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020132| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020132, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA020132

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020132, complete gene.

LocusTag

OSJNBA0017K09.7

Ensembl Transcript ID

BGIOSGA020132-TA

Ensembl Protein ID

BGIOSGA020132-PA

Length

2707

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26164567..26167273

Sequence Coding Region

26164567..26164617,26164723..26166010,26166137..26166283,26166639..26167273

Genome Context

<gbrowseImage1> name=IndicaChromosome05:26164567..26167273 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:26164567..26167273 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTCGGTTCTCTTGCTTCTCTTATTCGTCCCGCCATCACCGATCAAAGAAGTTGGTTGCTTCTTCAGTTGAAGACAGATGGGCATATCCAAATTTAACTCAGAAGGTAGATGGAAAAAATTGTAGTAATTCTAACGTTGAGCAGCACAGAAGCCCTCCTTTCGAGGATTGCTGCAGATCAGAAGATTTCAGTTTTTGCACTGAGAATGAGTCAGGGAAGATTAAGAAAAGTCAATCTCTTGGAGACATGCTTGAAATGGAGAAGCTTTATGATTTTGATAAGACCAACAATAAAGGGGAAGATTGTGCAATTGATGGTTCCCATGACGAGAAAACCTGTACGGGAGAATGCACCCGCAAAAAGAAGGAAAACCGTACCAGTTGTTGTGGTGATTTTACTGACCCACATCAACATGAGTGTCAGTCCTCCCTTGGCAATTCTGAACATCTCATCGAAAAGCAATGTGATTGTGAGGATATTGTGTCAACTTATTGTCTTGTCAACTCTGAAGAGCAGTCATTTTTGCCTGAGCCTCAGCCTTTGTTGAGCAGATCACAGTCTGTGAACCTTGATGTGCACATTCCCACCGTCATTGAAGATAGTATTGATTCTGCACAACTTGGGTTACGTTCTAGATCATTTGGGAACTTAAGTTCACTGGATGGAGCACCCTACACTGAAGAAGCTAGAGTTTCACCAAGTCACTGCAAAGATGCCTCAGAAGACTTTGTTCAATCCAATGCACAATCCCAGTGTCATTGTAGAGATGAACATATCAACAATAGTTCAACTGATGAAATTTCACAGTGTTGTGTGGAATCAGGAAATGACTGCCATCATTCAGATTTTACATCAACTGCAGCAGTGACACCGGTTAGAAACAATAACTCGTTTGATGATCCTCCTAGTCTATCACATGATGCAGGCAATACTGAAGAGATATTTCAACAAATTGATAAAAGAGAAGTTGCCACATCAGTGAAGAATTGTGAACCTGAACCTTGTTACCAGAATTGTTGCACGTCGTCGCGAAAAGAATTCAATGTTAGGAGAATTGAGAACTGGATCAGCCAAATTCCTGATTCAAATGACATAGCTCCATATGAACAGGGGGAATGTTCAAGTTCTGCGCATTTAATGAATTCCAAACAAGTCGATACTATCAGAAAGCTCAATGCTAAATCTCCTCTTGGCATGGAAACTGCTTACAACTACATCGCAATGCTGAAACCATCATCTTCCATAGCACAATTGTCTAATCTTGGCTTGGTTGCAATACCAATTCTCAGTGCATTCAGTGATTTGCGGCTGCTGAACTTGGCAGGGAACTCAATAATAAGGATAACTTCAGGAGCACTTCCGAAAGGACTCCGCATGTTAAATCTGTCAAGAAATAACATATCAACCATTGAAGGCCTAAAAGAGTTGACACTACTTCGTGTCCTGGACTTGAGTTACAACAGAATAACTAAAATTGGCCATGGCTTGGCCTCCTGTCCTTTCCTGAAGGAGCTGTACATCGGCGGCAACAAGATCAGCGAGGTGGAAGGCCTGCACCGCCTCAAGCTGAAGGTGCTCGACCTGCACGGCAACAGCCTCTCATCCTCGAAATGCCTCGACCAGCTCGCCAACTGCGGCACCCTGCAGTCGATCACCCTGGAGGGCAACCCGGCGCAGAGGAACGTCGGCGACGAGCAGCTCAAGAGGCACGTGCTGCGCCTCCTGCCGCACCTCGTGTACTACAACAAGCAGGCAGTGCGGTCGCGCCGGTGCTCCAAGCCCCAGGGCGGCGGCGGCCGCCATGGCCGGGCCGTCGACCTTGGTGGCGGTGGTGGCGGTGGCGGTGGCCGGAGCAAGAGGCTGGAGCTGAGGCTTCCCCGGAGGTCGGCGTGCGCCTCCGTTGCGCTGAAATCGTCAGGGTGTCACCACCATGTCAGGGCAGGAGCAGCAGCTGCAGCTCATGGCTCGGTGAGGACGTCGAGGCAGAGCCGGAATAATGCGCCTCCTATGGCTCCCACCATTCGTGGAGCTGATCGTTCTTCAGAGGGAGAGAGGAGGCTGCCTGGTACAGAGATCTCCGGTCAGATTTTTCGGATTCGAAGCGCGGATGACCTATGA</cdnaseq>

Protein Sequence

<aaseq>MVRFSCFSYSSRHHRSKKLVASSVEDRWAYPNLTQKVDGKNCSNSNVEQHRSPPFEDCCRSEDFSFCTENESGKIKKSQSLGDMLEMEKLYDFDKTNNKGEDCAIDGSHDEKTCTGECTRKKKENRTSCCGDFTDPHQHECQSSLGNSEHLIEKQCDCEDIVSTYCLVNSEEQSFLPEPQPLLSRSQSVNLDVHIPTVIEDSIDSAQLGLRSRSFGNLSSLDGAPYTEEARVSPSHCKDASEDFVQSNAQSQCHCRDEHINNSSTDEISQCCVESGNDCHHSDFTSTAAVTPVRNNNSFDDPPSLSHDAGNTEEIFQQIDKREVATSVKNCEPEPCYQNCCTSSRKEFNVRRIENWISQIPDSNDIAPYEQGECSSSAHLMNSKQVDTIRKLNAKSPLGMETAYNYIAMLKPSSSIAQLSNLGLVAIPILSAFSDLRLLNLAGNSIIRITSGALPKGLRMLNLSRNNISTIEGLKELTLLRVLDLSYNRITKIGHGLASCPFLKELYIGGNKISEVEGLHRLKLKVLDLHGNSLSSSKCLDQLANCGTLQSITLEGNPAQRNVGDEQLKRHVLRLLPHLVYYNKQAVRSRRCSKPQGGGGRHGRAVDLGGGGGGGGGRSKRLELRLPRRSACASVALKSSGCHHHVRAGAAAAAHGSVRTSRQSRNNAPPMAPTIRGADRSSEGERRLPGTEISGQIFRIRSADDL</aaseq>

Gene Sequence

<dnaseqindica>1..51#157..1444#1571..1717#2073..2707#ATGGTTCGGTTCTCTTGCTTCTCTTATTCGTCCCGCCATCACCGATCAAAGGTACACAAATTCGTCCACTACTGTTTGTGTTATTCTGCATCTTATGCTGCCACCAGCACTTACATTTTGCTGCATATCCAAATTTTGACTATTTTTTCCTCTCAGAAGTTGGTTGCTTCTTCAGTTGAAGACAGATGGGCATATCCAAATTTAACTCAGAAGGTAGATGGAAAAAATTGTAGTAATTCTAACGTTGAGCAGCACAGAAGCCCTCCTTTCGAGGATTGCTGCAGATCAGAAGATTTCAGTTTTTGCACTGAGAATGAGTCAGGGAAGATTAAGAAAAGTCAATCTCTTGGAGACATGCTTGAAATGGAGAAGCTTTATGATTTTGATAAGACCAACAATAAAGGGGAAGATTGTGCAATTGATGGTTCCCATGACGAGAAAACCTGTACGGGAGAATGCACCCGCAAAAAGAAGGAAAACCGTACCAGTTGTTGTGGTGATTTTACTGACCCACATCAACATGAGTGTCAGTCCTCCCTTGGCAATTCTGAACATCTCATCGAAAAGCAATGTGATTGTGAGGATATTGTGTCAACTTATTGTCTTGTCAACTCTGAAGAGCAGTCATTTTTGCCTGAGCCTCAGCCTTTGTTGAGCAGATCACAGTCTGTGAACCTTGATGTGCACATTCCCACCGTCATTGAAGATAGTATTGATTCTGCACAACTTGGGTTACGTTCTAGATCATTTGGGAACTTAAGTTCACTGGATGGAGCACCCTACACTGAAGAAGCTAGAGTTTCACCAAGTCACTGCAAAGATGCCTCAGAAGACTTTGTTCAATCCAATGCACAATCCCAGTGTCATTGTAGAGATGAACATATCAACAATAGTTCAACTGATGAAATTTCACAGTGTTGTGTGGAATCAGGAAATGACTGCCATCATTCAGATTTTACATCAACTGCAGCAGTGACACCGGTTAGAAACAATAACTCGTTTGATGATCCTCCTAGTCTATCACATGATGCAGGCAATACTGAAGAGATATTTCAACAAATTGATAAAAGAGAAGTTGCCACATCAGTGAAGAATTGTGAACCTGAACCTTGTTACCAGAATTGTTGCACGTCGTCGCGAAAAGAATTCAATGTTAGGAGAATTGAGAACTGGATCAGCCAAATTCCTGATTCAAATGACATAGCTCCATATGAACAGGGGGAATGTTCAAGTTCTGCGCATTTAATGAATTCCAAACAAGTCGATACTATCAGAAAGCTCAATGCTAAATCTCCTCTTGGCATGGAAACTGCTTACAACTACATCGCAATGCTGAAACCATCATCTTCCATAGCACAATTGTCTAATCTTGGCTTGGTTGCAATACCAATTCTCAGTGCATTCAGTGATTTGCGGCTGCTGAACTTGGCAGGGAACTCAATAAGTATGTTTCTCTCTAGTAGTGTGCTTTGATTTTTATGTCAAGTTCCTCCTACCCATTGGTTTTTCTATTTGATCCCTCATTGAATTTTTAACCTTTCTAAACCAGAATTACTTGTTCTTCTTTCAGTAAGGATAACTTCAGGAGCACTTCCGAAAGGACTCCGCATGTTAAATCTGTCAAGAAATAACATATCAACCATTGAAGGCCTAAAAGAGTTGACACTACTTCGTGTCCTGGACTTGAGTTACAACAGAATAACTAAAATTGGCCATGGTAATCTTCTCATACATGTTTTCAGTTTCAAGCCTTTTTACATGTACTATTATTTTCGTTTTTACAAGAGCATATGTACTAGTCTTATGGCACAATGTTTACTTCTGCTGATTATACTAGGCTGTAACAATCTAGAGCAACAGCCTCATTTGATATATTCTCCCCTCTGTCTTAAAAATAAACCAACCTCGTATTAGGATACGACATATCCTAATACAACGAATGACATAGAGTATGTCCAGATTTATAGTATTAGGATATATCACATCTTAATATTAAGTTGGTTTATTTTAGGACTGTGGGAGTATACTAACTAGGTTATTGGTTTCTGTTTCATTTCTCATATACTCTGCAGGCTTGGCCTCCTGTCCTTTCCTGAAGGAGCTGTACATCGGCGGCAACAAGATCAGCGAGGTGGAAGGCCTGCACCGCCTCAAGCTGAAGGTGCTCGACCTGCACGGCAACAGCCTCTCATCCTCGAAATGCCTCGACCAGCTCGCCAACTGCGGCACCCTGCAGTCGATCACCCTGGAGGGCAACCCGGCGCAGAGGAACGTCGGCGACGAGCAGCTCAAGAGGCACGTGCTGCGCCTCCTGCCGCACCTCGTGTACTACAACAAGCAGGCAGTGCGGTCGCGCCGGTGCTCCAAGCCCCAGGGCGGCGGCGGCCGCCATGGCCGGGCCGTCGACCTTGGTGGCGGTGGTGGCGGTGGCGGTGGCCGGAGCAAGAGGCTGGAGCTGAGGCTTCCCCGGAGGTCGGCGTGCGCCTCCGTTGCGCTGAAATCGTCAGGGTGTCACCACCATGTCAGGGCAGGAGCAGCAGCTGCAGCTCATGGCTCGGTGAGGACGTCGAGGCAGAGCCGGAATAATGCGCCTCCTATGGCTCCCACCATTCGTGGAGCTGATCGTTCTTCAGAGGGAGAGAGGAGGCTGCCTGGTACAGAGATCTCCGGTCAGATTTTTCGGATTCGAAGCGCGGATGACCTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020132