Os12g0104300
| Gene Name |
Os12g0104300 |
|---|---|
| Description |
Clp, N terminal domain containing protein |
| Version |
NM_001072457.1 GI:115486875 GeneID:4351252 |
| Length |
5337 bp |
| Definition |
Oryza sativa Japonica Group Os12g0104300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:219457..224793 |
| Sequence Coding Region |
219663..220843,222201..222447,222574..224535 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008405:219457..224793 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008405:219457..224793 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcccactccggtggccgccgcgaggcagtgcctctcgccggccgccgtccccgccctcgacgccgccgtcgcctccgctcgccgccgcgcccacgcccagactacctccctccacctcatctcctccctcctcgccccgcccgcacctcccctcctccgcgacgccctcgcccgcgcccgcagcgccgcctactccccacgcgtccagctcaaggccctcgacctctgcttcgccgtctccctcgacaggctcccctccgtctccgcctcctcctcctctggcgccgccgacgagccccccgtctccaactccctcatggccgccatcaagcgctcccaggccaaccagcgccgcaacccggacaccttccacttctaccaccaggccgccaccgcccagacccccgccgccgtcaaggtcgagctctcccacctcgtcctcgccatcctcgatgaccccgtcgtcagccgcgtcttcgccgaggccggattccgcagcggggacatcaagctcgccatcctccgcccggctccgcccatgccgctcctcggccgcctacccacgcgcacccgcccgcctcctctcttcctctgcagcttcgccgccgcggacgacgccgacgtcccttcgcctgcggggaacctcgcgggcgcgggggaggagaactgccgccgcatcgccgagatcctctcccgcggccgcaaccccatgctcgtcggcgtcggggccgcctccgccgcggacgacttcgcggccgcctccccgtatcgtatcatccatgtcgaccccaacaccatcgaccgctcagacctcggcgtggcggcggcaatggccagcgccacctccggcctcatcataagcatcggagacctcaagcagctggtccccgatgaggacgcggaggcgcaggagaatgggcggcgggtggtggcggaggtgacgcgagtgctggaggcgcacagcaaggtcggccgcgtctgggtgatggggtggtcggcaacgtacgagacctacctcgccttcctctccaaattccccttggtcgacaaggattgggacctccagctgctgccaatcaccgcggtgcatgctgcccctgccgccgccggccctgctgctgctggtggactcatgcctccggcaaccactgttgctgccttctccaagccagctgcaagcttgatggactcctttgttccttttggaggctttctctgtgataactacgaagagaacagcctgacagcaaattcatgcccacaggccctgcggtgccagcagtgcaatgataaatatgagcaagaagttgcaactatcattagcgcaagtggcattacagctgaagaccatcaccagggaggtcttccttcactgctgcagaatggcagcatgatgggtcctaacaatggatttgatccagtcaaggttagagatgatcggatggtattgaattcaaaaatattgaatctacagaagaagtggaacgagtactgcctgcggctccaccaagactgccagaggatcaacagagatccttacaaaccatttccacgctatattggtgttcccgctgacaaagaaagatcagcaaatccaagcaaaggttctgagtcaattggggttcaaaaggatgttattaaaccttgtgcagtgtctgctgtacattccagctcaactgcaaggcctatttcatctccatctgtcaccaacaaaagaaatgaagatcttgtattgaaccttcaagccaggcattccaagagtgatgaaaaccttcaagaaaggggcatgcaatcccaacatggcaccctgtcgaatgctgacaatccggatgatcatgcctcaccatcatctgctgcacctgtggagactgacttggttttgtgcacccctcgagattgtagttcgaaaggttcaagttccacctgcagtaaacgtgtagaggattcagagaggtctgtccatctggtacccaagaaggtggatgatttaaatctgaagcatccacaactctctgttcaacctaactcttgctcctggagttccataaatgttgggaaaacatcacacagtacactacactcagtagcttcaggaggcttctctgcctttggccaatggcagaaacggtcaccccttgctgcacaaaattctgatctgagcaattacaagctacttgtcgaacgcctgttcaaggtagttggaaggcaggaggaagccgtgagtgctatttgtgaatccattgtgcggtgccggtcaacagagtcgcgccgtggtcctagcaggaatgacatctggttgtgttttcatggttctgacagcatggccaagaagagaatcgccgtggcacttgcagagctcatgcacggcagcaaagagaacttgatttatctggacctaaaccttcaggattgggatgactccagtttcagagggaagactggcatagactgcattgtggagcagttgagcaagaaacggcgatctgttctcttccttgacaacattgatagagctgactgccttgttcaggatagtctgtctgatgctattaagtctggcaggttccaggacatgcgaggcaaggtggttgacattaatgactcgattgtggttttgtcaagaagcatgatacatggcagcaaaaatgggttggaagagggcctttcattttctgaagaaaagattctggcaactcgcggacatcgactgaagatcctggttgaaccgggtagggcaatcaccagtggatgccctagtggtaaggtggtagtttccccaaggcattttctcaccaaaattcaagcatctttgtgctctggttcaatcagcaagagaaagctcagcatgtctgatgaccaggaaaagctacaagagtcgccaagcagtttgaagcgactgcatagaacatcgagtataccgttcgacctgaacctccctgttgatgaggatgaaccctttgatgctgatgacgacagtagtagccatgaaaactcatatggcaacacagaaaaatccattgatgcccttttgcattcagttgatggatcaatcaattttaagccgtttgactttgataaacttgcggatgacatgctgcaggagttcagcaacatactcaggaaaaatctgggtgctgagtgcatgttggagattgatgttggtgcaatggagcaaatacttgccgcagcatggaaatcagaggacaagggccctgtgcagacctggctggagcaggtttttgccaggagccttgacgagctgaagctcaaatataagcatgtgagtagctctacccttagactagtgccctgtgaggacacattaccaacagtgaaaggagatggtttaggagttttgctcccaccaagaataattctagattgttga</cdnaseq> |
| Protein Sequence |
<aaseq>MPTPVAAARQCLSPAAVPALDAAVASARRRAHAQTTSLHLISSL LAPPAPPLLRDALARARSAAYSPRVQLKALDLCFAVSLDRLPSVSASSSSGAADEPPV SNSLMAAIKRSQANQRRNPDTFHFYHQAATAQTPAAVKVELSHLVLAILDDPVVSRVF AEAGFRSGDIKLAILRPAPPMPLLGRLPTRTRPPPLFLCSFAAADDADVPSPAGNLAG AGEENCRRIAEILSRGRNPMLVGVGAASAADDFAAASPYRIIHVDPNTIDRSDLGVAA AMASATSGLIISIGDLKQLVPDEDAEAQENGRRVVAEVTRVLEAHSKVGRVWVMGWSA TYETYLAFLSKFPLVDKDWDLQLLPITAVHAAPAAAGPAAAGGLMPPATTVAAFSKPA ASLMDSFVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIISASGITAED HHQGGLPSLLQNGSMMGPNNGFDPVKVRDDRMVLNSKILNLQKKWNEYCLRLHQDCQR INRDPYKPFPRYIGVPADKERSANPSKGSESIGVQKDVIKPCAVSAVHSSSTARPISS PSVTNKRNEDLVLNLQARHSKSDENLQERGMQSQHGTLSNADNPDDHASPSSAAPVET DLVLCTPRDCSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCSWSS INVGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLLVERLFKVVGRQEEA VSAICESIVRCRSTESRRGPSRNDIWLCFHGSDSMAKKRIAVALAELMHGSKENLIYL DLNLQDWDDSSFRGKTGIDCIVEQLSKKRRSVLFLDNIDRADCLVQDSLSDAIKSGRF QDMRGKVVDINDSIVVLSRSMIHGSKNGLEEGLSFSEEKILATRGHRLKILVEPGRAI TSGCPSGKVVVSPRHFLTKIQASLCSGSISKRKLSMSDDQEKLQESPSSLKRLHRTSS IPFDLNLPVDEDEPFDADDDSSSHENSYGNTEKSIDALLHSVDGSINFKPFDFDKLAD DMLQEFSNILRKNLGAECMLEIDVGAMEQILAAAWKSEDKGPVQTWLEQVFARSLDEL KLKYKHVSSSTLRLVPCEDTLPTVKGDGLGVLLPPRIILDC</aaseq> |
| Gene Sequence |
<dnaseqindica>207..1387#2745..2991#3118..5079#atcccttccttccttccattttattttcttttattttcccaacaaagagaaaagagggtgaggagcctccatccgcgaaaagcaactccacccgacaacctgccccatgcactttccgttattctcatttcacccctcgcaattttacactccgccccccatgccctctcaaaactaattacaatccagtccttcaccggtcagcgatgcccactccggtggccgccgcgaggcagtgcctctcgccggccgccgtccccgccctcgacgccgccgtcgcctccgctcgccgccgcgcccacgcccagactacctccctccacctcatctcctccctcctcgccccgcccgcacctcccctcctccgcgacgccctcgcccgcgcccgcagcgccgcctactccccacgcgtccagctcaaggccctcgacctctgcttcgccgtctccctcgacaggctcccctccgtctccgcctcctcctcctctggcgccgccgacgagccccccgtctccaactccctcatggccgccatcaagcgctcccaggccaaccagcgccgcaacccggacaccttccacttctaccaccaggccgccaccgcccagacccccgccgccgtcaaggtcgagctctcccacctcgtcctcgccatcctcgatgaccccgtcgtcagccgcgtcttcgccgaggccggattccgcagcggggacatcaagctcgccatcctccgcccggctccgcccatgccgctcctcggccgcctacccacgcgcacccgcccgcctcctctcttcctctgcagcttcgccgccgcggacgacgccgacgtcccttcgcctgcggggaacctcgcgggcgcgggggaggagaactgccgccgcatcgccgagatcctctcccgcggccgcaaccccatgctcgtcggcgtcggggccgcctccgccgcggacgacttcgcggccgcctccccgtatcgtatcatccatgtcgaccccaacaccatcgaccgctcagacctcggcgtggcggcggcaatggccagcgccacctccggcctcatcataagcatcggagacctcaagcagctggtccccgatgaggacgcggaggcgcaggagaatgggcggcgggtggtggcggaggtgacgcgagtgctggaggcgcacagcaaggtcggccgcgtctgggtgatggggtggtcggcaacgtacgagacctacctcgccttcctctccaaattccccttggtcgacaaggattgggacctccagctgctgccaatcaccgcggtgcatgctgcccctgccgccgccggccctgctgctgctggtggactcatgcctccggcaaccactgttgctgccttctccaagccagctgcaaggtcaagcctcttctcttctcttctcttcacttttgtatccacgaattctttatgcataagatttttattaccatccatttgctgactgccgtgagttaaatgtcccccctttctttattgtcagaatgtttcttggatagtagtgtatctgattaggtgtgctagtacgatttgcttatgttctttactaatttcattttcttaagtgttgatttgtgtgctttgcccattgtagtatggatatttttttcaacttgtgcaattgatttagtgtactactgtaattagaagcagcataggtagctaaaaatacataaatctagaaaggtttgttttcttccactgcattttttaaaaaatgtttttacacggtcaatgatgtacaaccgtttttgtttaatgcgatggtttagttactatgttctaagttccatgttactcctgttatgttctatgttcagtcctgttaggtgcgacaagagttgctggatattttctcttctcggaagtgggttccaatttgttgtcatcagaaccttccagaccaacttccttttagatgctctgctgttagtcactacctgtgttatttactgatttctcagctcttttttattttttgcctttaggatatttaatgggattttcttcttataagccttttctctgtagtcctattcttgtaatattttggattttattactacatatgtgtggccatgaaggagaggttctatagccagtgcagaatccatataatgcacatttcaaactgcttgataaagagagactaaagtgtaaaagtaaaataatatggcttgtgtactaagagatgcaatttcatggtaaaagagtggtgcttctgctgcagcacatctgttctttactgttgtaatgctcaaattgctgatagtttgggtcatatatgtgggcagagattatttgtcattaatatgtagtatcacctataatgaattaccttgatgcatagggctatgtgtggcctatataccaatgaactccactgcttccatgctttgttctaccttgtagcctgatctccttggtagggtctttctgtatatcaaaatcgcagcaatatcctgaaattattgaatcaaggattgtttgatttgaactgctttcagttatgtttacaaatatgtcccaccagaattttgcaacactcttctgatttctgtcacagcatagtattgtatggcattttattcagctgtagaaatgttagtgcttaagcattgcaggtattaatgacaaagtgacatatgcataactccaatataaagcaaagatatgcttgtgccttgacctcatagtttcaaacttgttattgcagcttgatggactcctttgttccttttggaggctttctctgtgataactacgaagagaacagcctgacagcaaattcatgcccacaggccctgcggtgccagcagtgcaatgataaatatgagcaagaagttgcaactatcattagcgcaagtggcattacagctgaagaccatcaccagggaggtcttccttcactgctgcagaatggcagcatgatgggtcctaacaatggatttgatccagtcaaggtgtgaagctacctatgtcttttggaacatttatgttaagtactgaacgcagcaagcactgcttgttgatagatgaataatttttggtcgttggtataaaagatgcacagttttttttcagtgcaggttagagatgatcggatggtattgaattcaaaaatattgaatctacagaagaagtggaacgagtactgcctgcggctccaccaagactgccagaggatcaacagagatccttacaaaccatttccacgctatattggtgttcccgctgacaaagaaagatcagcaaatccaagcaaaggttctgagtcaattggggttcaaaaggatgttattaaaccttgtgcagtgtctgctgtacattccagctcaactgcaaggcctatttcatctccatctgtcaccaacaaaagaaatgaagatcttgtattgaaccttcaagccaggcattccaagagtgatgaaaaccttcaagaaaggggcatgcaatcccaacatggcaccctgtcgaatgctgacaatccggatgatcatgcctcaccatcatctgctgcacctgtggagactgacttggttttgtgcacccctcgagattgtagttcgaaaggttcaagttccacctgcagtaaacgtgtagaggattcagagaggtctgtccatctggtacccaagaaggtggatgatttaaatctgaagcatccacaactctctgttcaacctaactcttgctcctggagttccataaatgttgggaaaacatcacacagtacactacactcagtagcttcaggaggcttctctgcctttggccaatggcagaaacggtcaccccttgctgcacaaaattctgatctgagcaattacaagctacttgtcgaacgcctgttcaaggtagttggaaggcaggaggaagccgtgagtgctatttgtgaatccattgtgcggtgccggtcaacagagtcgcgccgtggtcctagcaggaatgacatctggttgtgttttcatggttctgacagcatggccaagaagagaatcgccgtggcacttgcagagctcatgcacggcagcaaagagaacttgatttatctggacctaaaccttcaggattgggatgactccagtttcagagggaagactggcatagactgcattgtggagcagttgagcaagaaacggcgatctgttctcttccttgacaacattgatagagctgactgccttgttcaggatagtctgtctgatgctattaagtctggcaggttccaggacatgcgaggcaaggtggttgacattaatgactcgattgtggttttgtcaagaagcatgatacatggcagcaaaaatgggttggaagagggcctttcattttctgaagaaaagattctggcaactcgcggacatcgactgaagatcctggttgaaccgggtagggcaatcaccagtggatgccctagtggtaaggtggtagtttccccaaggcattttctcaccaaaattcaagcatctttgtgctctggttcaatcagcaagagaaagctcagcatgtctgatgaccaggaaaagctacaagagtcgccaagcagtttgaagcgactgcatagaacatcgagtataccgttcgacctgaacctccctgttgatgaggatgaaccctttgatgctgatgacgacagtagtagccatgaaaactcatatggcaacacagaaaaatccattgatgcccttttgcattcagttgatggatcaatcaattttaagccgtttgactttgataaacttgcggatgacatgctgcaggagttcagcaacatactcaggaaaaatctgggtgctgagtgcatgttggagattgatgttggtgcaatggagcaaatacttgccgcagcatggaaatcagaggacaagggccctgtgcagacctggctggagcaggtttttgccaggagccttgacgagctgaagctcaaatataagcatgtgagtagctctacccttagactagtgccctgtgaggacacattaccaacagtgaaaggagatggtttaggagttttgctcccaccaagaataattctagattgttgatgatattatctgtatagggatcgctgtaattatctgtagtccacaatagtatagcattatttgttggctaaataagctctagtctagctgatgcattgccttgggttctctaattagctactgccagtactgtcatatcattttctacctcagggccttttccagatatatgggcatccgaatgtatattggttgtaactactatggattgtcaatatttgattgttctatatatacatggacacatggtgctcggtc</dnaseqindica> 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| External Link(s) |
