BGIOSGA020142

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Revision as of 03:04, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020142| Description = Polyubiquitin| Definition = Oryza sativa Indica Group BGIOSGA020142, complete gene.| tag = OSJNOA0048I04.3| tid = BG...")
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Gene Name

BGIOSGA020142

Description

Polyubiquitin

Definition

Oryza sativa Indica Group BGIOSGA020142, complete gene.

LocusTag

OSJNOA0048I04.3

Ensembl Transcript ID

BGIOSGA020142-TA

Ensembl Protein ID

BGIOSGA020142-PA

Length

1146

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26336959..26338104

Sequence Coding Region

26336959..26338104

Genome Context

<gbrowseImage1> name=IndicaChromosome05:26336959..26338104 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:26336959..26338104 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGATCTTTGTGAAGACTCTCACTGGCAAGACCATAACCCTTGAGGTTGAGTCCTCGGATACCATTGACAATGTAAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAAGATGGGCGCACGCTTGCTGACTACAACATCCAGAAGGAATCCACCCTCCACCTTGTCCTCCGCCTCCGGGGAGGCATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACTATCACCCTTGAGGTTGAGTCTTCTGATACTATTGACAACGTTAAGGCAAAGATCCAGGACAAGGAGGGGATTCCCCCGGACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGTAGGACCCTTGCTGACTACAACATCCAGAAGGAGTCCACCCTTCACCTTGTTCTCCGCCTAAGGGGAGGAATGCAGATCTTCGTGAAGACCCTTACTGGCAAGACCATTACGCTTGAGGTTGAGTCATCAGACACGATCGACAACGTGAAGGCGAAGATCCAGGATAAGGAGGGCATTCCCCCAGACCAGCAGCGTCTTATTTTTGCCGGCAAGCAGCTGGAGGATGGCAGGACCCTCGCTGACTACAACATCCAGAAGGAGTCCACCCTTCACCTTGTTCTGCGCCTAAGGGGTGGAATGCAGATTTTCGTCAAGACTCTCACTGGCAAGACTATTACCCTGGAGGTTGAGAGCTCAGACACCATTGACAACGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCAGCAGAGACTCATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTTGCCGACTACAACATTCAGAAGGAGTCTACCCTACACTTGGTGCTCCGCCTCAGGGGTGGTATGCAGATCTTCGTCAAGACTCTTACTGGCAAGACCATTACTCTGGAGGTTGAGAGCTCCGATACCATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCCCCAGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGTACCCTCGCCGACTACAACATTCAGAAGGAGTCTACCCTCCACCTGGTGCTCCGCCTCAGGGGTGGTCAGTAA</cdnaseq>

Protein Sequence

<aaseq>MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGQ</aaseq>

Gene Sequence

<dnaseqindica>1..1146#ATGCAGATCTTTGTGAAGACTCTCACTGGCAAGACCATAACCCTTGAGGTTGAGTCCTCGGATACCATTGACAATGTAAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAAGATGGGCGCACGCTTGCTGACTACAACATCCAGAAGGAATCCACCCTCCACCTTGTCCTCCGCCTCCGGGGAGGCATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACTATCACCCTTGAGGTTGAGTCTTCTGATACTATTGACAACGTTAAGGCAAAGATCCAGGACAAGGAGGGGATTCCCCCGGACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGTAGGACCCTTGCTGACTACAACATCCAGAAGGAGTCCACCCTTCACCTTGTTCTCCGCCTAAGGGGAGGAATGCAGATCTTCGTGAAGACCCTTACTGGCAAGACCATTACGCTTGAGGTTGAGTCATCAGACACGATCGACAACGTGAAGGCGAAGATCCAGGATAAGGAGGGCATTCCCCCAGACCAGCAGCGTCTTATTTTTGCCGGCAAGCAGCTGGAGGATGGCAGGACCCTCGCTGACTACAACATCCAGAAGGAGTCCACCCTTCACCTTGTTCTGCGCCTAAGGGGTGGAATGCAGATTTTCGTCAAGACTCTCACTGGCAAGACTATTACCCTGGAGGTTGAGAGCTCAGACACCATTGACAACGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCCCCGGACCAGCAGAGACTCATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTTGCCGACTACAACATTCAGAAGGAGTCTACCCTACACTTGGTGCTCCGCCTCAGGGGTGGTATGCAGATCTTCGTCAAGACTCTTACTGGCAAGACCATTACTCTGGAGGTTGAGAGCTCCGATACCATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCCCCAGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGTACCCTCGCCGACTACAACATTCAGAAGGAGTCTACCCTCCACCTGGTGCTCCGCCTCAGGGGTGGTCAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020142