BGIOSGA020156

From RiceWiki
Revision as of 03:04, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020156| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020156, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020156

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020156, complete gene.

LocusTag

OSJNBB0108E17.8

Ensembl Transcript ID

BGIOSGA020156-TA

Ensembl Protein ID

BGIOSGA020156-PA

Length

4052

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26656279..26660330

Sequence Coding Region

26656279..26656369,26657018..26657241,26657349..26657410,26658135..26658356,26658656..26658785
,26659289..26659614,26659826..26659967,26660085..26660330

Genome Context

<gbrowseImage1> name=IndicaChromosome05:26656279..26660330 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:26656279..26660330 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGGAGTACGGGCCCGCGGCGGCGCCGCGGCTGCTGGTGTCCGACTCCGGCCGCGTCCATGAGATGGAGAGGTTCTCGCATTACGTCGCTAGGCAAATTGGGTTTGACCATGTGGATGAATGCCCCCACCTATGTACGCTGGCCTATGATTATCTGAGGAAGAACAAGGGTTACGAAGAAAACATATTCGCGTTCTTCCAAAACAGCCAGGATCCCGAGACTCTGATTGTAAAGTTCATCGAGGAACTCGACAAATGTATACTTGGCTACTTCTCATTCCATTGGAACTATGCAACCTATATAATTTCCCAGGTTTTGACTGTAGAAGGTGCTCCTAAAAGAAAGCTCAGGAACATGGTATTAGAGGCCACTAGGAAACAGAGATTTGAAAGGGTTACAAGAAACTTGAAGGTGACCAGACTATTCTCCACATTGGTGGAGGAGCTGAAGGCCATAGGACTATCTTCCCATGTTGAAGCACCACGGAGTGATGTGATGGTCCCAGCAGCACATTGTGATCGCAGCCCAGTTCTACTCTTGATGGGTGGTGGGATGGGAGCTGGCAAGAGCACCGTGCTTAAGGATATACTCAAGGAAGCATTCTGGTCCGGAGCAGCTGCAAATGCAGTAGTTGTAGAGGCAGATGCATTCAAGGAAACTGATGTAATCTATCGAGCTATCAGCTCAAGAGGCCACCACAATGACATGCTGCAGACGGCAGAACTGGTACATCAGTCATCGATGGACGCAGCCTCGTCGCTCCTGGTGACTGCCCTCAACGAAGGGAGGGATGTGATCATGGACGGCACCATGTCGTGGGAGCCGTTTGTCCAGCAGACGATCACCATGGCCAGGGCTGTGCACCGGCAACGGTACCGCATGGGTGTTGGCTACAAGGTCACGGAGGACGGGTCAATCACTGAGGAGTACTGGGAGCCAGTTGAGGACTCCAGTACAGATGAAGAAGGCGAGACGAGAAACAGGAAGCCATATCGCATCGAGCTCGTAGGTGTGGTCTGTGATGCCTATCTTGCGGTTGTCAGGGGGATCAGGAGAGCTGTGATCACCGGGAGAGCAGTGAGGGTGAAGTCCCAGCTGAAGTCCCACAAGCGGTTCGCCACCGCGTTCCACAGCTACTGCAACCTCGTCGACAATGCGAGGCTCTACTGCACCAACTCCACGGGCGCCGCCAAGCTGATAGGATGGAAGGACGGCGAGAGCAACCTTCTAGTGGACCCTGAAGAAATCGGCTGCTTGGAGAGGGTGAGCCACCTCAACGACGAGGCCGACTGCGTCCACGAGATCTATCCGGACGGCTCGGCGGCGGCGGCCTGGGAGGCCCTGGTCACGTCGCCGTCGAGGGCGCCGGCGCAGCGGGAGATCATGGCGGCGGTCCAGAGGAGCGAGGCGCGCTTCCGGACCACGTCCACGCCCTCGTAG</cdnaseq>

Protein Sequence

<aaseq>MREYGPAAAPRLLVSDSGRVHEMERFSHYVARQIGFDHVDECPHLCTLAYDYLRKNKGYEENIFAFFQNSQDPETLIVKFIEELDKCILGYFSFHWNYATYIISQVLTVEGAPKRKLRNMVLEATRKQRFERVTRNLKVTRLFSTLVEELKAIGLSSHVEAPRSDVMVPAAHCDRSPVLLLMGGGMGAGKSTVLKDILKEAFWSGAAANAVVVEADAFKETDVIYRAISSRGHHNDMLQTAELVHQSSMDAASSLLVTALNEGRDVIMDGTMSWEPFVQQTITMARAVHRQRYRMGVGYKVTEDGSITEEYWEPVEDSSTDEEGETRNRKPYRIELVGVVCDAYLAVVRGIRRAVITGRAVRVKSQLKSHKRFATAFHSYCNLVDNARLYCTNSTGAAKLIGWKDGESNLLVDPEEIGCLERVSHLNDEADCVHEIYPDGSAAAAWEALVTSPSRAPAQREIMAAVQRSEARFRTTSTPS</aaseq>

Gene Sequence

<dnaseqindica>1..91#740..963#1071..1132#1857..2078#2378..2507#3011..3336#3548..3689#3807..4052#ATGAGGGAGTACGGGCCCGCGGCGGCGCCGCGGCTGCTGGTGTCCGACTCCGGCCGCGTCCATGAGATGGAGAGGTTCTCGCATTACGTCGGTACGCAACCTCGCTCTACTACTACTTAGTACCTTCGATCGATTACTTTGTAACTTTGCTTAAGCATTCAATGGATTTTTTTTTTTGCGGAGCAATATTGCTTCCGATTGATTGAATGGATTGCTCTCCGATGCAGTACATTGACTTGCAAGAACTCAATTCCATCCACGATTTTCGGAGGGGATCGCATGCTCCAGCGTTGGAATGTGTGATTTATGTTTTTTCACCTTGTCTTCTTTGTCGATTTCGTAAGGGAAATTGCGCTACAACCATTTCCTTTTAGTTTGTTCATCACTTTGTCCAATCCAAAAATCCAGGATACAGCGCGGAATTCGAGTGTGCACAGCACACGCATCTAGATAGGCATATTATTAATGGGGTGGCGTGGAGATTGATTAGCGGCAACTTGGGCATAGAAAATTTTGGGGGGGTGGAAATGGAAGCGAGACATTAGATTATGCTTTCCACTCCATGAAACACCACTAGCGAGATTCCAAACAATGGCATATTCTATGTGGTTTGAGTTGTAGCACATCATCACATATTATTCTTTTGTCCCTTTATGATCTTGGGACCAGCACTGGTTTCCCCCCACCTTGTGTCCTTCTTGCCTTTTCTGTTTTCTCACAAATATGTGGCAATTTTCAGCTAGGCAAATTGGGTTTGACCATGTGGATGAATGCCCCCACCTATGTACGCTGGCCTATGATTATCTGAGGAAGAACAAGGGTTACGAAGAAAACATATTCGCGTTCTTCCAAAACAGCCAGGATCCCGAGACTCTGATTGTAAAGTTCATCGAGGAACTCGACAAATGTATACTTGGCTACTTCTCATTCCATTGGAACTATGCAACCTATATAATTTCCCAGGTAAAGGAGTTAGGACCTTTTGCCTTATGGCTTTGTCCTCTATTGCTTCCTTATGAAACTCTCCTCCACTGATATTTTACGTATTGATACAGTGGTGATTTTCACAGGTTTTGACTGTAGAAGGTGCTCCTAAAAGAAAGCTCAGGAACATGGTATTAGAGGCCACTAGGTAATTAATCATCCTTGAGCTACATGCTTGGTAGTTCAAAATATTTAATGCACAGTCATTGCCTAATCTCTGCCTTTTTTTTATGCCAAGTATTAGTTGCTTTAGCTTGCAGCATCTTCTTGCTTTACTGCAGCACAAGTTTTTCTTACTTGACTTGGATGTACTATTAATCAACTCATATGATCTCTTGTTTGGAGTTCTTTTTGTACAAATATTTTTGTAGGAGTATCATATATTTACAGAATCTCTCCTCATTTAATGTTGTGTTGGATCTGTCTCCTTGAAGTGCTTATTGGTTGAGTTGAATTATTTATTCTATTGACTGGTTATTTTCTTCCTATCTGATCAAACCTTTCACTGGATCAACTTCAGAGCTCAAAATGGATATTTTAGCAGAAACAGCACATTTGAAGTCAAAGCAATTAGATTTAGATGATAGGCATGTGCTTAGGCTAAACTATGGTTTCTTTATTTACTCCTATAGCCCTATGTTTGGCCTGCCATGTTCCTTTGAAAAGTACATTGGTAATTACTTAAGTGCCTAACCGGAGAAGTTCAAGTGGAGAAAATGCTTATAGTTTCGATCCAATATGGTCTCTTATATCTTGAAAAACATGTTTATAACCAGTTACAATTCAATCCCTGTATTTAAGTAGATGAACTCTGTTTCTCTGACATCAAAACTCAAAATGAGGTCTAGCTTCTGACTCTCCACTAAATACAGGAAACAGAGATTTGAAAGGGTTACAAGAAACTTGAAGGTGACCAGACTATTCTCCACATTGGTGGAGGAGCTGAAGGCCATAGGACTATCTTCCCATGTTGAAGCACCACGGAGTGATGTGATGGTCCCAGCAGCACATTGTGATCGCAGCCCAGTTCTACTCTTGATGGGTGGTGGGATGGGAGCTGGCAAGAGCACCGTGCTTAAGGATATACTCAAGGAGTAAGTTGATCACTTCCATGCTCGACATTCTGTTCGTGTTTTGTTTCATCTCCCTTTTCGTGTATGTTTCTCATCCTGTGGTTCAATATTTTGTTAAAGCTAAAAACATTGATCTGATCTGCCAACCAGCAGGTTAATGAGGAGGAGAATAGGTGAATGAGAAATGGCAAGATGTAATAATCAATTAGGAGGAGAAAAACATTGCTTGGACTTTTTAATCAAAGCCAGAGCAGCTAAAGAATATAAAATACGCCTTTTCAGAAAGCTTATCGTGCTGCTACCTGTTTCTTGATCTGCAGAGCATTCTGGTCCGGAGCAGCTGCAAATGCAGTAGTTGTAGAGGCAGATGCATTCAAGGAAACTGATGTAATCTATCGAGCTATCAGCTCAAGAGGCCACCACAATGACATGCTGCAGACGGCAGAACTGGTATTTGTTAGCAGCTGTTACTATACTATATATGTTAATACCAGTATACCAGTCAGTGAGTAAAACGGCACATGACCACTACATGACAACCCAAAATGTACAATTGCAATCATTTACATTTTAGTGTCTTGGAGATGCTGTCCCACCTCCTAAATCTCCACCCCTATATTCATCTTTACTATACATTGAAACAAGAAACCCAATCTCCTACTCCCTCCGTCCCAAAAAAAGGCAAACCCTGGGTTTCCGTGTCTAACGTTGACTGTCCGTCTTATATGAAATTTTTTTATAATTCGTATTTTCATTGTTATTAGATGATAAAACATGATTAATATTTTATGCGTGACTTGTCTTTTTAATTTTTTTCATAATTTTTTCAAATAAGATGGACGATTAAACGTTTGGCACGGAAACCAGGATTTGTCTTTTTTTGGGACGGAGGAAGTATGTACATTTCAGACATACCATGGCTCATTGTCAGTGACCCCTCGATTCCGGTGCAGGTACATCAGTCATCGATGGACGCAGCCTCGTCGCTCCTGGTGACTGCCCTCAACGAAGGGAGGGATGTGATCATGGACGGCACCATGTCGTGGGAGCCGTTTGTCCAGCAGACGATCACCATGGCCAGGGCTGTGCACCGGCAACGGTACCGCATGGGTGTTGGCTACAAGGTCACGGAGGACGGGTCAATCACTGAGGAGTACTGGGAGCCAGTTGAGGACTCCAGTACAGATGAAGAAGGCGAGACGAGAAACAGGAAGCCATATCGCATCGAGCTCGTAGGTGTGGTCTGTGATGCCTATCTTGCGGTTGTCAGGGGGATCAGGTATGCTTCAGAACTTAATCCTACTCCACTACATGTCTACATTACTGATACTATGCTTGTTCATATTACTCAAACAAATTCTGCTTGATCTTGCCTGTTTCTGCTCACGCTTCCATTATGTCAGCATTGCGATTGACTCAACTGCACTATTTTCCGTGTACTAACAAAGAGGTATAAGCACAAAATTTGACACGGTTAATCACATTGTCAGGAGAGCTGTGATCACCGGGAGAGCAGTGAGGGTGAAGTCCCAGCTGAAGTCCCACAAGCGGTTCGCCACCGCGTTCCACAGCTACTGCAACCTCGTCGACAATGCGAGGCTCTACTGCACCAACTCCACGGGCGCCGCCAAGGTGAGCTTACCAATGCATTCCGTGTTCGGTTACCGATGTTGTTATCGGGGCCAGTTTTATAACATCAGGCACATTGAGAAATGATAATTCACCATCGCTCGCTGGCTCTCTCTACAGCTGATAGGATGGAAGGACGGCGAGAGCAACCTTCTAGTGGACCCTGAAGAAATCGGCTGCTTGGAGAGGGTGAGCCACCTCAACGACGAGGCCGACTGCGTCCACGAGATCTATCCGGACGGCTCGGCGGCGGCGGCCTGGGAGGCCCTGGTCACGTCGCCGTCGAGGGCGCCGGCGCAGCGGGAGATCATGGCGGCGGTCCAGAGGAGCGAGGCGCGCTTCCGGACCACGTCCACGCCCTCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020156