BGIOSGA020159

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Revision as of 03:04, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020159| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020159, complete gene.| tag = OS05G05...")
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Gene Name

BGIOSGA020159

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020159, complete gene.

LocusTag

OS05G0509300

Ensembl Transcript ID

BGIOSGA020159-TA

Ensembl Protein ID

BGIOSGA020159-PA

Length

5349

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26688500..26693848

Sequence Coding Region

26688500..26688670,26688766..26688966,26689056..26689309,26689541..26689613,26689732..26689788
,26690292..26690371,26690459..26690521,26690751..26690838,26691128..26691229
,26691368..26691441,26691762..26691826,26692005..26692168,26692251..26692318
,26692409..26692469,26692801..26692838,26693045..26693113,26693226..26693547
,26693819..26693848

Genome Context

<gbrowseImage1> name=IndicaChromosome05:26688500..26693848 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:26688500..26693848 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGCTCGACCTCCCTCACCGAGGCGGAGGCGGGGATCACCTGCTTCGCCTCCTCCCTCCCGGGCTTCCGCGGCGTCCTCAAGCACCGCTACTCCGACTTCATCGTCCACGAGGTCGCCCGCGACGGCTCCGTCGCCCGCCTCACCTCCTTCGATCTCCCCGACGAGTGCGTGGATGTGAGTGAGGAGGACAAGGCGGCGCCGTCCGCCGACGCGGACCACTCGCAGGCCCTCGAGTCGTTCCGTGCGCTCTGTGGCGATGCGGATTGCGACGCGTTGAAGGGGCTCCTCGAGAAGGCGTCCGCGGGGGCTGAGGCTGATGTATCGCCGGTTATTCTCTCGCCGGACGCCGATAAGGCTCATCGATCGGAGGTGCATAATTTCTTCAAGAGGAGCTTCAAGTTTTTGGTCACCGACACGGTCGAACACAATGATGGAGTTCAGAGATGCATTAGGGTGCGGCTGGGATCAGGAGCTAGGGGAGGGCGGGGTGGCGGTGGGAGAAGTGGTGGTGGGAGGGGAAGGAAGAGGAAGAACATGGGTGGTTCTGATTGGAGAGATGACAGGCCATTTGATAGCAGAGGATCAACTAGCTGGCCAAATCATGTTGGGAAGTTCCTAAGGTTTCACCTTTGCAAAGAGAACAAGGACACACAAGAAGCGTTAGGAGTAATTGGGAAAATGTTAGGACTTCAGTCACGTTCATTCGGGTTTGCAGGGACAAAAGATAAACGTGCTGTTACAACACAACAGGTGACTGTTTTCAAGATATCAGCCAACAGATTGGCTGCACTTAATAATCGACTATTTGGAATTAAAGTTGGAAACTTTAGTTATGTGAAGGAGGGACTTGTTCTTGGTCAACTAATGGGAAATCGATTTACAATTACTCTGAGGGGTGTTGTTGCAGAATCAGAAGACATAATAAAGGCTTCTGTGGAGGGCTTAGGAAAGAATGGATTTATCAACTACTATGGGTTGCAGAGAGATGACATAAGGGAGATGCGTGAACATTACAAGGAGCATGGTGATATTGATATGGCACTAAGGAACTTCCCTCGACATCTTGTAGCCGAGAAGGCTATTCTTCAATGTTTGAAGAAATGCCCTGGTAACTATCTGCAAGCATTAAAGAGTATACCAAGAACATTACGAATGATGTACGTTCATAGTTACCAAAGTTACCTCTGGAACCATGCTGCCAGTGCCAGAGTTGAAAAATATGGCATTTCGCAGGCTGTAGAAGGTGACTTAGTTTATAGCAAAGAGCCCCCTCCTGGAGAAGCAACTTCAGTTGATACTTCAGAACCTTGCGATGACCAAATAAATTCATCTGATATTGATCTATGTTCTGAGACACTTCCAGAAGAAACAATCCAGTCTGTGAAGATAGTTGATTCTGAAGATTTATTGAAGGGTGTCTACTCATTTGAAGATGTTGTCCTTCCTTTGCCTGGTTCGCAAGCATTATTTCCTGGAAACGGAATTGCTGACATTTATCATGAATTGGCTAAAAAGGATGGCATTAGCTTGACAGAGAATGCACATGGTGTCAAGGAGTTTTCAATTACAAGCATGAAAGGAGGTTATCGGCGGGTGTTCCAGCGGCCTATTGATTTTGAGTGGGAACTCATGACTTATACAGATGACACAGCATCTTTAGCAGAAACTGATTTGGATGTTCTGTCCAGAAACAAACCTACAAAAGCCAAGGAAGTAAATGAGACTATATCTAGCGCGATTTCAAATGCTCAATCACATGATTCCAAGGTGGCAGGACCATTGGATAGCTCTATGCCAGGTAGTGAAACTGGCTTAGTAGAGGAAAAGTCTGTCGGTAGCTCAGATATGTTAGCAAGGAAATTGGCCATAAAATTAGCATTTACTCTACCAGCATCCTCCTATGCTACAATGGCTATTAGGGAGTTGCTGAAGACTTCAACCTCGGTCACGTATCAGAAAACACTCGATTGTTAA</cdnaseq>

Protein Sequence

<aaseq>MARSTSLTEAEAGITCFASSLPGFRGVLKHRYSDFIVHEVARDGSVARLTSFDLPDECVDVSEEDKAAPSADADHSQALESFRALCGDADCDALKGLLEKASAGAEADVSPVILSPDADKAHRSEVHNFFKRSFKFLVTDTVEHNDGVQRCIRVRLGSGARGGRGGGGRSGGGRGRKRKNMGGSDWRDDRPFDSRGSTSWPNHVGKFLRFHLCKENKDTQEALGVIGKMLGLQSRSFGFAGTKDKRAVTTQQVTVFKISANRLAALNNRLFGIKVGNFSYVKEGLVLGQLMGNRFTITLRGVVAESEDIIKASVEGLGKNGFINYYGLQRDDIREMREHYKEHGDIDMALRNFPRHLVAEKAILQCLKKCPGNYLQALKSIPRTLRMMYVHSYQSYLWNHAASARVEKYGISQAVEGDLVYSKEPPPGEATSVDTSEPCDDQINSSDIDLCSETLPEETIQSVKIVDSEDLLKGVYSFEDVVLPLPGSQALFPGNGIADIYHELAKKDGISLTENAHGVKEFSITSMKGGYRRVFQRPIDFEWELMTYTDDTASLAETDLDVLSRNKPTKAKEVNETISSAISNAQSHDSKVAGPLDSSMPGSETGLVEEKSVGSSDMLARKLAIKLAFTLPASSYATMAIRELLKTSTSVTYQKTLDC</aaseq>

Gene Sequence

<dnaseqindica>1..171#267..467#557..810#1042..1114#1233..1289#1793..1872#1960..2022#2252..2339#2629..2730#2869..2942#3263..3327#3506..3669#3752..3819#3910..3970#4302..4339#4546..4614#4727..5048#5320..5349#ATGGCGCGCTCGACCTCCCTCACCGAGGCGGAGGCGGGGATCACCTGCTTCGCCTCCTCCCTCCCGGGCTTCCGCGGCGTCCTCAAGCACCGCTACTCCGACTTCATCGTCCACGAGGTCGCCCGCGACGGCTCCGTCGCCCGCCTCACCTCCTTCGATCTCCCCGACGAGGTAAGCTTAGCCCTCTCGACCCCGATTCCGCGGCTCCCTCCCGGGATCCCCGATTTTTTTTCATCGCGCTAGCTCAGCTCCGCCGTGTATCGCAGTGCGTGGATGTGAGTGAGGAGGACAAGGCGGCGCCGTCCGCCGACGCGGACCACTCGCAGGCCCTCGAGTCGTTCCGTGCGCTCTGTGGCGATGCGGATTGCGACGCGTTGAAGGGGCTCCTCGAGAAGGCGTCCGCGGGGGCTGAGGCTGATGTATCGCCGGTTATTCTCTCGCCGGACGCCGATAAGGCTCATCGATCGGTTGGTTTGATCCCCCAGTTCCAGTTTCTGGTTGTTTATGTGGTTGAGATTGGTGGAAATGGTGTGATTTGGGCGTGTTTTTTCTGTAGGAGGTGCATAATTTCTTCAAGAGGAGCTTCAAGTTTTTGGTCACCGACACGGTCGAACACAATGATGGAGTTCAGAGATGCATTAGGGTGCGGCTGGGATCAGGAGCTAGGGGAGGGCGGGGTGGCGGTGGGAGAAGTGGTGGTGGGAGGGGAAGGAAGAGGAAGAACATGGGTGGTTCTGATTGGAGAGATGACAGGCCATTTGATAGCAGAGGATCAACTAGCTGGCCAAATCATGTTGGGAAGTTCCTAAGGTGGTGGAATTCAGCTTGAATTGATAGTTTCTATTGGCCTGGTATCTTTAGCTGGCCTTTGTACTCGAATGTGTTCATCTGACTTGCTGTGTATTTTACTTGGCTAAACTTAATAAAAAACATCTAATCTATGTGTATAAATTTGTATAAGGAATATTATGTTTTTGCTTCGTCTAATTTTGCTGTTAATTAGCGTTATAACCGGAGTTGTCATTCTGGTGTGCTGACCAGGTTTCACCTTTGCAAAGAGAACAAGGACACACAAGAAGCGTTAGGAGTAATTGGGAAAATGTTAGGACTTCAGGTATACCTCGGTTGCTAACTCATAACATTGTGTTCTTGTTTCTACTGAATGCTTTGATTCTTCTTTTTTACCTTCCTTCGCATTCCTAGTTGATTTCTATACCTTTTGCAATTTGCAGTCACGTTCATTCGGGTTTGCAGGGACAAAAGATAAACGTGCTGTTACAACACAACAGGTACTTATTCCTCATGTGCATACCATCTCACTCAATTTTCTTTACATAAATCGTGTTTTTGTACAATTTGTTTAAAAGTTCGCATACAAGTATGCAAGAAATACTGGTATAATTTTAATTAAGGCATAATTTATGGTATTATGATGTTACAACCAGATGAGATAAGTGAAGCTGCTCTGGTTTGGAATACTACATGTAGTATTGTCTTGGCAAAGGAGTTTTGTGAAATGAAACTACAAGATCATTTTTCTTTAACTACTACCGTTCATAGTTTTTAGTCTTTTCACCTTTAGTTTGTATTGCTTGGCTTTGTTCTCATCTCTAGCCTACCCAGCTTGGTTGAGATTAAAGGCTGGTGTTGTTGCTGTATTTTGCATAGTGATTTTTAGTCTATTTGACAGATTTGTTTATGTTATCTCACTCCTTTTTCATGGTTGTGATCCTCTGCTTGTAATTACGTTTTCTTGCAATGGTTACTTTTCTGATTGTTTTCCCCTGGTTAGGTGACTGTTTTCAAGATATCAGCCAACAGATTGGCTGCACTTAATAATCGACTATTTGGAATTAAAGTTGGAAACTTTAGGTAGGTGATAAAATGCATTATCCTCTTTGTTGATATCATTGCAATGTAATTATTCTAAATTCTAATTATTTTTACATTCCTTTCTAGTTATGTGAAGGAGGGACTTGTTCTTGGTCAACTAATGGGAAATCGATTTACAATTACTCTGAGGTACTTGTTTTTTATTTCTCCTTTTAGTTTAATGTAAAAAACTAAAAATGTTCTCTAGTGCTCTAAAAAATGATTTGCACTAATCTTAGAGCTCATGGAGGGCCTGATTTGCAGCTACATATTACTTCACTACAAACAGTACTATATTTCACATGCACCAAACCTCTTCTTTTCTTGGTTCAAGAAAACCAAACAAATGGAGAGCTGATATTTTCCTGCATTTCTTCAGGGGTGTTGTTGCAGAATCAGAAGACATAATAAAGGCTTCTGTGGAGGGCTTAGGAAAGAATGGATTTATCAACTACTATGGGTTGCAGGTATGAAGCCAGAACCTTTTCGTTATGCTTCAAAACCTAACTGGTACGTGTTTACTTTTGAAGCTCATCAAGTTCATCTTTTTTGTTGGTTAGCGTTTTGGAAGTGGTTCAGTACCTACTCACCTTGTTGGAGCTGCTTTGCTTAGAGGAGAGTGGAGAAGTTCTGTAAATTTGATTCTTGATCCAAGGGAAGGAGATATCCTTGATTTATTTTATCCAATCAGCAGTTGCATACTTGGATATATAGCTGTGCCAACTTTTGTTCAACATAACTTAATACTCCGAACAGAGAGATGACATAAGGGAGATGCGTGAACATTACAAGGAGCATGGTGATATTGATATGGCACTAAGGAACTTCCCTCGACATCTTGTAGCCGAGAAGGCTATTGTAAGTGTAGTTCTTTTCCTTCATTACTTAACCTGGAATTATTTAAAACATTGGCTTTTTAGTTTTTATTCAGTTATGTAATGTAGATCACATTATTTGGGGAAGTTAAACTGATATTCTTTCATGCATTGTTTCCAGCTTCAATGTTTGAAGAAATGCCCTGGTAACTATCTGCAAGCATTAAAGAGTATACCAAGAACATTACGAATGATGTATGTTGTTTATCTTTCTTCGTCTTTTCATGTTTCTTTACATTGATGGGTTAGTCAATTTCTGTTACCTCAAAAGCTAGGTAGATTTTATAATATACAAAATTGTATTGGAATTATTATAGACATTAGTCATGAACAGTAGTAGATCTGTTATATGTACCTGTTTTTAAAATTGTTCTCTGCTGCTCAATATACATACCGTTTGCTATATTCAAGCTTTTCTGTTACCCTTTTTCTCTGTTCTGTTTTGTTGACCAATTTATTAATTCTCATATTTTGCTTATGCGTCTTTCTTATTTGCTGTTGCCTCTTTTATGAAGGTACGTTCATAGTTACCAAAGTTACCTCTGGAACCATGCTGCCAGTGCCAGAGTTGAAAAATATGGTCAGTGCACTTCATCCTTCTACAGCTACTCAGTTTTAGTTGAATCATGATGCAGTTTGATAATTTTCTGATAACGGCTAACCTTGACCTTTTTCTTCAGGCGTGTTACCTTTTGTAGTTTTATATGGTGAACTTCTCTTTTCCCATTCCTCCTTATGCTAACTGGTGTACTTGACAGGCATTTCGCAGGCTGTAGAAGGTGACTTAGTTTATAGCAAAGAGCCCCCTCCTGGAGAAGCAACTTCAGTTGATACTTCAGAACCTTGCGATGACCAAATAAATTCATCTGATATTGATCTATGTTCTGAGACACTTCCAGAAGAAACAATCCAGTCTGTGAAGGTCTGTAATTTGCAGCAAACAATGCGGTGTACATTCTCATGCACAAAAAGTTCCTAATCATGCACTGTCATTTCTCGTGTAGATAGTTGATTCTGAAGATTTATTGAAGGGTGTCTACTCATTTGAAGATGTTGTCCTTCCTTTGCCTGGGTATTTACCATTCCACATCCATAACTTCAATTTTCATATTGAATCACATTGAGAAATATATATGGTGTGCTTATTTCTGTAAACATGCAGTTCGCAAGCATTATTTCCTGGAAACGGAATTGCTGACATTTATCATGAATTGGCTAAAAAGGTGCTACTATCCTACAAAATTTATTTTATAGTTTATTCAGAAGTACTTCCTTTGCTTTGCCAGGAACTTGTGCATTCTTGAATTTCCTCTATAACCCTTCTGTTGCTAAACGCAAAAAAGAAAAACACATATTGTAGGTTATTGGTTGCTAGATATGTTTACTGTGAAATGTGTTTAGTTTCCCTTTTCTTTTTGTGGATAAACGATACTTCTGTAATGTCACAGGTTTAATTGGCTAATATATTATGAATGAATTACACAATATTTTTTAAAGTGAAAGATTAAATCCAAGAAATAGGAATCATATTGTTGATTTGCTTTCATGTCTCAGGATGGCATTAGCTTGACAGAGAATGCACATGGTGTCAAGTAAGTTTCTTTATTTTACTGTAAAGATCAAAGGCACCTCTAAAAGTCGATACTTAGTATATGTGCTATGACAAGCTTTATATCTTTTTGTTCTGATATCCTACTATATTCTCATTCTGTTGTATATATTACCTTGGCTTGCATATTTCAATTTGCTACTTTATACCCTAACTTCTATGCTATATGATACAAACTCCATTTTTAAGGGAGTTTTCAATTACAAGCATGAAAGGAGGTTATCGGCGGGTGTTCCAGCGGCCTATTGATTTTGAGTGGTATGTCTTATCCCATTGACTTTTCACTTCATTAGATGACCAAAATCATCACCTTTTCTTTCGTATAAATTCTAGCCCTGTTCCACTAAAAAATGCTTTGGTGTGACTGTAGGGAACTCATGACTTATACAGATGACACAGCATCTTTAGCAGAAACTGATTTGGATGTTCTGTCCAGAAACAAACCTACAAAAGCCAAGGAAGTAAATGAGACTATATCTAGCGCGATTTCAAATGCTCAATCACATGATTCCAAGGTGGCAGGACCATTGGATAGCTCTATGCCAGGTAGTGAAACTGGCTTAGTAGAGGAAAAGTCTGTCGGTAGCTCAGATATGTTAGCAAGGAAATTGGCCATAAAATTAGCATTTACTCTACCAGCATCCTCCTATGCTACAATGGCTATTAGGGAGTTGCTGAAGACTTCAACCTCGGTATGTTTCTCAACTAATATTATATTACTATTCTTTTACTACAATTTAAATGATGTTAAATGGACTCTGTTTATGGTGTTATGCATAGTTAAGAATGCATGCCTACTTGAGAATTCAAATACATTTAATTATGGCAGTTGCCCAACAGTATTGTTAATATTTTAGGACGTCAGGAGAAAATATTGTTGAATATTTCAATATATATGCTATTGCTCTAACATGTTAACAAAGAACAACATTCATTTCATAATTACCTTCTGCTCGTCTGCAGGTCACGTATCAGAAAACACTCGATTGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020159