BGIOSGA020162

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Revision as of 03:04, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020162| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020162, complete gene.| tag = OS05G05...")
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Gene Name

BGIOSGA020162

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020162, complete gene.

LocusTag

OS05G0510300

Ensembl Transcript ID

BGIOSGA020162-TA

Ensembl Protein ID

BGIOSGA020162-PA

Length

4830

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26748824..26753653

Sequence Coding Region

26748824..26749001,26749100..26749592,26750755..26750830,26750937..26751029,26751555..26751641
,26751726..26752483,26752835..26752963,26753533..26753653

Genome Context

<gbrowseImage1> name=IndicaChromosome05:26748824..26753653 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:26748824..26753653 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCCGCCGTTCAGCCGCCGCCGTCCCCGCCCCCGCCGCGGCGGCCCCGCTCGGGCCCTCCACCGGGGCTGAAGAATCTCGGCAACACCTGCTACCTCAACAGCGTGCTACAGTGCCTCGCGTCGACCCCTCCCCTCGCTACCTTCTGCCTCTCCTTCCGGCACTCCAATCTGTGCAAGAAGGTGTTGCCGAACAAGGACAAGGAGTGTGTGTTCTGTGTGGTGGAACGGCAGATCTCGCGGCTGCTTCGGACCGAAGCAGGGGCGCTAGACTCGCCAGCGAAGATCATACGCTGCCTGCCGCTCTTTGCCGAGCATTTCCGGTGGGGCCGCCAAGAGGATGCGCACGAGTTCCTGCGCTATATTATAGACGCTTGTCACACCGCTGGTCTGCGCATACGCAAGCGGCTACCTGCGTCAAACGCCAATGGGGACGCTGGCGAGGAGGAGGTCTGGGTGCAAGGGCCATGTATGGTGATGAAGGAGACATTTGGCGGTGCGCTGCTCAGCCAAGTGAAGTGCCTCACCTGCAAGGGAGAGTCAAACAAGACCGACGAGATAATGGATATCAGCCTCGACCTGCCTGGAAGCAATTCTGTTGCTGATGCGCTTGCCCGTTTTTTTCAGCCTGAGATATTGGAGGGTTCAAACAAGTACAGCTGCGAAAGATGCAAGAAGCTCACCTCAGCACGGAAGCAATTGTTTGTCCTTAGGGCACCTAAGGTGCTCGTCATACAACTCAAGAGATTTGAGGGAATAAATGGTGGGAAGATCAACAGGAACATAGAATTCAAAGAGACTCTCTTTCTTTCTGACTTCATGTATAATAAAAACCAGGATTCACTGCCAGTATATAATCTTTTTGGCAGTATTGTTCACTCAGGGTTCTCTCCAGATTCTGGTCACTACTATGCGTATGTTAAGGATGCTATTGGTCGCTGGTATTGTTGTAATGATTCCCATATCTCCCCCTCAAGCTCTCAGGATGTTCTATCTGAGAAGGTCTACATCCTATTCTATATTCTGAGTACCAAAACTCAAAAGCCTAGTACAAATGGTTACTCTTCTAGTGCTGCTAAATCTTCCAACAGCAATGGAAATGGCATATCAAATGCCACATCTAATGAGCCCCTGAAGATACCACTAGTAAAACAGAATGGACTATGTTCTAGTAAAGGTATTGCACCGCCACCCCTGAAGAATGGCAAGATTGCACCAGGTATGCACCTCAAGCCAATCCACTTGAAGAATAATGGAACGGGGAAAGTTTCTTCAAATGGCAAGGCAAGCATCATTCCGGGCAATAAGCTAGAAGTTAGTGAGGGTTTAACACTGCCAGCAGTGAATGGCCGTGACTCTGGAAAATATGCAGAACCCGGTAAAATGAATGCTAATGGTAGTGTTTCTTGCAATAAGACGGATGTTAATTCACAGAGAGTGTTGCCCAATACGAATGGAAATGGAAATCCAATTCACTTTTCTGATCTTCAAGAGACCACTGATGCTAAGGCTACATGTGCTGAGCAATATTCTGAAAAGTCATCTATTGCCAGTTTGGAGGATTCTAAAAATCCTGTTTCATGCCATGAAATGTCTGCAGTCATAGTAAAGGATGTGGTATCTTCGGGTAAGGACAGTTCTTCCTTGAAGCACCGTCTTGAAGAAGGGAAGTTTAAGGAAATGCTTGCTGAATCGGCATCTTCTGAGCTTCACTTGTCTGGTTGGGTGGATGATGTCCGTAATTTCATGCACACTATAAAGAGACGCCGTCTACAAAATACAGGCACGCCTCAAGATAGTGACACAATGAGAAAGGAGCTGATAAGCGAATCTGGAAGAATATTTAGGTCAAAAATTCCAGAATCGCTGAGGGAGCATCTCATTCAAGCCCTGCGGTCATATTACCAGGACAAATTTTCACTGGGAGGATAA</cdnaseq>

Protein Sequence

<aaseq>MAPAVQPPPSPPPPRRPRSGPPPGLKNLGNTCYLNSVLQCLASTPPLATFCLSFRHSNLCKKVLPNKDKECVFCVVERQISRLLRTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYIIDACHTAGLRIRKRLPASNANGDAGEEEVWVQGPCMVMKETFGGALLSQVKCLTCKGESNKTDEIMDISLDLPGSNSVADALARFFQPEILEGSNKYSCERCKKLTSARKQLFVLRAPKVLVIQLKRFEGINGGKINRNIEFKETLFLSDFMYNKNQDSLPVYNLFGSIVHSGFSPDSGHYYAYVKDAIGRWYCCNDSHISPSSSQDVLSEKVYILFYILSTKTQKPSTNGYSSSAAKSSNSNGNGISNATSNEPLKIPLVKQNGLCSSKGIAPPPLKNGKIAPGMHLKPIHLKNNGTGKVSSNGKASIIPGNKLEVSEGLTLPAVNGRDSGKYAEPGKMNANGSVSCNKTDVNSQRVLPNTNGNGNPIHFSDLQETTDAKATCAEQYSEKSSIASLEDSKNPVSCHEMSAVIVKDVVSSGKDSSSLKHRLEEGKFKEMLAESASSELHLSGWVDDVRNFMHTIKRRRLQNTGTPQDSDTMRKELISESGRIFRSKIPESLREHLIQALRSYYQDKFSLGG</aaseq>

Gene Sequence

<dnaseqindica>1..178#277..769#1932..2007#2114..2206#2732..2818#2903..3660#4012..4140#4710..4830#ATGGCGCCCGCCGTTCAGCCGCCGCCGTCCCCGCCCCCGCCGCGGCGGCCCCGCTCGGGCCCTCCACCGGGGCTGAAGAATCTCGGCAACACCTGCTACCTCAACAGCGTGCTACAGTGCCTCGCGTCGACCCCTCCCCTCGCTACCTTCTGCCTCTCCTTCCGGCACTCCAATCTGTGTACGAAACCCTAGCTCATACTTTCTTCCTGTTCTAATTGATTGTATGTATTTGGGCGATTCGCCAGGAAGCTGATATGTTCGCCTGTTGGCATGCAGGCAAGAAGGTGTTGCCGAACAAGGACAAGGAGTGTGTGTTCTGTGTGGTGGAACGGCAGATCTCGCGGCTGCTTCGGACCGAAGCAGGGGCGCTAGACTCGCCAGCGAAGATCATACGCTGCCTGCCGCTCTTTGCCGAGCATTTCCGGTGGGGCCGCCAAGAGGATGCGCACGAGTTCCTGCGCTATATTATAGACGCTTGTCACACCGCTGGTCTGCGCATACGCAAGCGGCTACCTGCGTCAAACGCCAATGGGGACGCTGGCGAGGAGGAGGTCTGGGTGCAAGGGCCATGTATGGTGATGAAGGAGACATTTGGCGGTGCGCTGCTCAGCCAAGTGAAGTGCCTCACCTGCAAGGGAGAGTCAAACAAGACCGACGAGATAATGGATATCAGCCTCGACCTGCCTGGAAGCAATTCTGTTGCTGATGCGCTTGCCCGTTTTTTTCAGCCTGAGATATTGGAGGGTTCAAACAAGTACAGCTGCGAAAGGTACATTTTATCCGCTAGTTAGTTGCTGATAAATTGTCAAGTGGTTCTAAGTCGCCTAGGCAGTACGGACGTGGGCATGGCAGCATGGCGTCTAGCTCCTTGTCACACTACGCAGCATGCTGGAGGCAGGATGGCACCTAGCTCCTAATCGGACTATGCAACCGCTTTCTTGTTATTACCACGTTAGACTGGATAGTGACACGTAGCGTGAGGGCAAACTAACTACTTTTTTAACTGTATTTTGGTATAGCTTAATTAGGGCTTGTTTTTGATGAGGGATCTAGATGGAAATATAATTATTCTGAGTCCAATAGTAATTTTTTTATTTAGTTTCTTGAAAAAAAACACACTAATGTTTTGTTAAAAAATCTCAAGGTATTTTGTTAAGAAAAACAAGTGTATTCTGGATATTTTGTAAAAAAAGTTGTAGTGTTGAATGCCTAGGTTTTCGAATGAAATGTCCAAGTTTCAAAATCTGCTAGGAATGTTTTTGCTTTCCGCTTGATTGGACTGCTTAACCCCTGTGGAAAAGGTAAGCCAGTTACGTTTTCCTTATATTTCACTGGAATCAAGTTTTCTGTTCAAATTTCCTGGAAGATTTCTTATCAGGGAATGATTGATCTAGTGGTCGTGTGCTTGCTTAATCTTGCTGACAACGGCTTTAACATTTGGTACATTTACAAAAAAGAACTTGTGTTCCAAAGGAAATTGGAAAACCTTGCCCAATTTGGAGGTCCAATTGCCTTTCCTATATTGGCAGTGGTCCATCCAATAATTTATAAGAAAAATCAATATATTATATAAAAAGCAATCATTATACATTTTACAAAGTGCGCACTCACTTTTCACAAAGGGAAAAGTAGGTAATAGATAGCTAGCCTCTTTAACCTTGCTCGTTGAGGTATTTCCCGGACGGGGCAGTTTATGCTTATAAAGGAATGCAACCCTGCCAACCACACCTTTAGGGTCTTAGGGGATTAAAGTGAGCTCAATACGAGAACCTGTTAATATTAACTGTGCTATCAGTTTCCATTTATATTCTTTTCATGAAGCCACTATAATGCTTGCCCATTCATAGTTTTGAACTTGGGTTTCCGAAATTCTTCTTATGTGTTCCGGACATGCCCTAACTTGCGAAAGGCAATTTTTTTTTGTATCGCAGATGCAAGAAGCTCACCTCAGCACGGAAGCAATTGTTTGTCCTTAGGGCACCTAAGGTGCTCGTCATACAACTCAAGGTTATCAATCTTCATTCCTGATATTTTTATTCTATAGAACTTGTTATTGATTAAGATATGTTGCTGATGACCTCTGTTTACTTCCATTCTGGTTTGTTGCCACTAGAGATTTGAGGGAATAAATGGTGGGAAGATCAACAGGAACATAGAATTCAAAGAGACTCTCTTTCTTTCTGACTTCATGTATAATAAAAACCAGGTACAGAATATCCTCTTGATTGTTACATTAGTATTTGTTGCTTGTTCTACATGTAGTTAATAATGTCAAACTAGTCGTGGAAACAAGTTATGTCAATCGTAGCAATCCATCAAGCAGTGACCACATGCTGGCTGTTTATGTAATTTTATTGTGCTACTTTTTTGCATTTATGCTACAGCATGAAGTCATAAATCTTTAAGGATCATTTTTTTTCTGCAATTATTGTTAGGTGAACTCTCCAAGAATGTTGTTTAGGATCAAGAAATTCTGGATTATATATGTCTTATAGTTATATTTTGTGGCGTTTATGTGGTATGACCCTACAAGAGCTTCATAAAGTTGCAAAGAAAAGTTCCATAGGGTCAAACTACATCTGGACTATGACACAGCATTTTAGGATTATTCTTCACTTGAAATCACTTTCATCCGCATTTTTCATTGTTTGTTTTTAACATTTCTGCTAATATTTCATACCAAGAATCAGATCAGTTTGTTTTAATTATATTGCTTTGCATGGATCTGCAGGATTCACTGCCAGTATATAATCTTTTTGGCAGTATTGTTCACTCAGGGTTCTCTCCAGATTCTGGTCACTACTATGCGTATGTTAAGGTAATAATAGGCTTTTCCCCAGTACTTAAAGTCTTCAATTATTTTGCCCTGACATCTAACTAAATGATTGTTGACTATGCTCAGGATGCTATTGGTCGCTGGTATTGTTGTAATGATTCCCATATCTCCCCCTCAAGCTCTCAGGATGTTCTATCTGAGAAGGTCTACATCCTATTCTATATTCTGAGTACCAAAACTCAAAAGCCTAGTACAAATGGTTACTCTTCTAGTGCTGCTAAATCTTCCAACAGCAATGGAAATGGCATATCAAATGCCACATCTAATGAGCCCCTGAAGATACCACTAGTAAAACAGAATGGACTATGTTCTAGTAAAGGTATTGCACCGCCACCCCTGAAGAATGGCAAGATTGCACCAGGTATGCACCTCAAGCCAATCCACTTGAAGAATAATGGAACGGGGAAAGTTTCTTCAAATGGCAAGGCAAGCATCATTCCGGGCAATAAGCTAGAAGTTAGTGAGGGTTTAACACTGCCAGCAGTGAATGGCCGTGACTCTGGAAAATATGCAGAACCCGGTAAAATGAATGCTAATGGTAGTGTTTCTTGCAATAAGACGGATGTTAATTCACAGAGAGTGTTGCCCAATACGAATGGAAATGGAAATCCAATTCACTTTTCTGATCTTCAAGAGACCACTGATGCTAAGGCTACATGTGCTGAGCAATATTCTGAAAAGTCATCTATTGCCAGTTTGGAGGATTCTAAAAATCCTGTTTCATGCCATGAAATGTCTGCAGTCATAGTAAAGGATGTGGTATCTTCGGGTAAGGACAGTTCTTCCTTGAAGCACCGTCTTGAAGAAGGGAAGTTTAAGGAAATGTAAGTCTCTAATGGGCAGGAACTATTTTGCTTTTGTTATTTGTAGCTATTTCCATGAAGCACTGATTGTCCATTCTGCTTTATCTTTTCTCTAGCAGTTTCAGATGTTATACAACTTGCTGATTGTATGTCTGAAATTTTATGAAGTTATACTAACAATTTTCATGCTACAACTACAATTATTCACACATATTTAAAAAATGTTTACTGCAGTTTGTAGTGTATGTTGTAGAATCTTCACACATATTGTTCATTGGAGGAATATGTAATGGTTGCCTTTTTTTTTGTTTTTGAATTTGGAACATCTTTTTGTTGAACTTACTGTGCGTTTTATTATTTAATTAAAAACAGGCTTGCTGAATCGGCATCTTCTGAGCTTCACTTGTCTGGTTGGGTGGATGATGTCCGTAATTTCATGCACACTATAAAGAGACGCCGTCTACAAAATACAGGCACGCCTCAAGATAGTGACACAATGAGGTACTTTGATGTGACATTTTTGTGCAACTTTATTTTTTTTTCTTACAAGATTCTATAGGTGGATAAGCTCGTATGCCTTTATTCTTTGGTTGTTTTGCTAGTTATATCTTTTTGTCTGGAAATGTTTCCTTCATGTTCTGCATTATTGCCCCAATTCAACCTTGATCCATAACTATGCGTTGCTAGAATTTTGGTATTTCGTGGCTGCAGCATCAGTATTATAGTTTTAGTTACTGACAAAATACCCATGCTTTGCTATGGGTAAAAGAAAATATATATTATGTCAAAGACATGTTTGCTTATTTGAATACATGATATTCATTTGATTCAAATAAACATTAGACTATTGTATAATATCAGAAAATATAAGGGACTAATTTGAAAAAAGTACAAAAGTAGTGGTGCACTAGTGTCTTTTATAGTACTCTCTCCGTTTCGGAAGCCCCACACTGCCACACAAGTCATACGTCAAACATGATTCAATGGCTTCCATTTCTCTTCTGTGCTATTGCTTACATCATTCAATGGCTCTAATATTTGTATATTTCTCTCTTTTTTTGGCAATGCAGAAAGGAGCTGATAAGCGAATCTGGAAGAATATTTAGGTCAAAAATTCCAGAATCGCTGAGGGAGCATCTCATTCAAGCCCTGCGGTCATATTACCAGGACAAATTTTCACTGGGAGGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020162