BGIOSGA020171

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Revision as of 03:04, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020171| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020171, complete gene.| tag = OsI_205...")
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Gene Name

BGIOSGA020171

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020171, complete gene.

LocusTag

OsI_20596

Ensembl Transcript ID

BGIOSGA020171-TA

Ensembl Protein ID

BGIOSGA020171-PA

Length

2824

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26845271..26848094

Sequence Coding Region

26845271..26845528,26845605..26845754,26845820..26846078,26846182..26846400,26847086..26847228
,26847795..26848094

Genome Context

<gbrowseImage1> name=IndicaChromosome05:26845271..26848094 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:26845271..26848094 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGTCCGCCGCCGCCGTGGCATCCACCGCGCCGCCGCAGCCGCTGCGGCCGCGCCGGGGGATAGCCGTGCCGTCGTCATACTCACACCGCGCGGCGACGCGGCCGCGCCTCGCCGTCTCGGCGTCCTCCACCACCACCGGCACCACCGAGACGACGAGCGAACGCGGCGGCGCCGAGCGGTTCTACTTCAACTTCACCGGGTTCCCCTTCCCGCTCGGGCCGTTCCTCAACCGCCGCACCATCCGCACCGAGGCGGTGAAGGGGAGGATATGGCTGTTCGAGCAGGAGCAGGCGCTGGGGTTCAGCAGCGTCTCCACCAACACCCGCATGACCGTCATCAAGCTCAAGTCCGGCGGCCTCTGGGTGCACGCCCCCATCGCGCCGACCAAGGAGTGCATCCAGCTTCTCAAGGAGCTCGACGCGCCGGTGGAGCACATCGTGCTGCCGACCTTCGCCTACGAGCACAAGGTCTTCTTCGGGCCATTCACCAGGAAATTCCCCAGGGCGCAGATATGGGTGGCGCCCAGGCAGTGGAGCTGGCCGATCAACCTGCCGCTGGAGTTCTTCGGGATCTTCCGGGCCAAGCCCCTCCAAGACGAGGACGACGACACCCCATGGGCGGGCGAGATCGAGCAGAAGATGCTCAGCTCGCCTGAAGTTGGGATTGGACCCTATGTGGAGGTGGCATTCTACCACAAGCCTTCGCGGACATTGTTGGTGACGGATGCCGTCATTTTTGTTCCTCGGCAGCCACCTGAGTGTATCAGCAAAGAGTCGTTGCTGGCATCTGCCAAGAACGGCTTGGCAGTGAAGATTTTGAGCAAAGGAAAAGAGGTCCCAGATGAACCAGTTGTGGACAATAAGCTGAACCGTCAGAAAGGATGGGAGCGAATGGTACTGCAAATATTGTTTCTTGGTCCCTCAAATCTTCTGGAGCCAAACGCAAGTTTTGCTCAAATGTCTCAGAAGTTGATTGTCTCCCCAATTGTGAAGACACTTGTTTTCAGCAAAGTTCCAGAGAAGGTGAGAGACTGGGTCGACAGGATCGCTGCAGACTGGCCATTCAGGAGGATAATCCCAGCTCACTTCGCAGCTCCGATTAATGCGAGCCGGTCCGACTTCTTGGCTGCCTTTGCTTTCCTAGATGAGTTCCTCCCCGAGCGATCTCCAGCATCGCCCGGCCTCTCACTCCTCTTTGCCTCGCTCATGGGCAAGGCGGCGAGCTACTTCCCCCCTGATGACATGAAGACCCTGTCATCCCTGGACGAGTTCTTGGTTTCAGTTGGTGCTGTCAAGAAGACAGTTTCAGGCAGAAAGCGATGA</cdnaseq>

Protein Sequence

<aaseq>MAASAAAVASTAPPQPLRPRRGIAVPSSYSHRAATRPRLAVSASSTTTGTTETTSERGGAERFYFNFTGFPFPLGPFLNRRTIRTEAVKGRIWLFEQEQALGFSSVSTNTRMTVIKLKSGGLWVHAPIAPTKECIQLLKELDAPVEHIVLPTFAYEHKVFFGPFTRKFPRAQIWVAPRQWSWPINLPLEFFGIFRAKPLQDEDDDTPWAGEIEQKMLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVIFVPRQPPECISKESLLASAKNGLAVKILSKGKEVPDEPVVDNKLNRQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWVDRIAADWPFRRIIPAHFAAPINASRSDFLAAFAFLDEFLPERSPASPGLSLLFASLMGKAASYFPPDDMKTLSSLDEFLVSVGAVKKTVSGRKR</aaseq>

Gene Sequence

<dnaseqindica>1..258#335..484#550..808#912..1130#1816..1958#2525..2824#ATGGCCGCGTCCGCCGCCGCCGTGGCATCCACCGCGCCGCCGCAGCCGCTGCGGCCGCGCCGGGGGATAGCCGTGCCGTCGTCATACTCACACCGCGCGGCGACGCGGCCGCGCCTCGCCGTCTCGGCGTCCTCCACCACCACCGGCACCACCGAGACGACGAGCGAACGCGGCGGCGCCGAGCGGTTCTACTTCAACTTCACCGGGTTCCCCTTCCCGCTCGGGCCGTTCCTCAACCGCCGCACCATCCGCACCGAGGTAATTAACCCCGCCTGAATCCTTCTGCTCTCCGGCGGCGGCGGCGGCGCGTGTCTAATGGCGTCGAACGAAGCAGGCGGTGAAGGGGAGGATATGGCTGTTCGAGCAGGAGCAGGCGCTGGGGTTCAGCAGCGTCTCCACCAACACCCGCATGACCGTCATCAAGCTCAAGTCCGGCGGCCTCTGGGTGCACGCCCCCATCGCGCCGACCAAGGAGTGCATCCAGGCAAGCAATCCCCGATCTCCCCCGTCTCCTCCGATTCAGTCTCGTCTCATGTCGCCGCCGTGCAGCTTCTCAAGGAGCTCGACGCGCCGGTGGAGCACATCGTGCTGCCGACCTTCGCCTACGAGCACAAGGTCTTCTTCGGGCCATTCACCAGGAAATTCCCCAGGGCGCAGATATGGGTGGCGCCCAGGCAGTGGAGCTGGCCGATCAACCTGCCGCTGGAGTTCTTCGGGATCTTCCGGGCCAAGCCCCTCCAAGACGAGGACGACGACACCCCATGGGCGGGCGAGATCGAGCAGAAGATGCTCAGCTCGCCTGAAGTTGGTAGCGTCACTGTCACCAACCAATTCGAGCTTCTATTTCATCAGCAAATGGATGCAATTTTTTTTTATAGCTGTGTGCAATGGTGTGAATTTGGTGATTTCAGGGATTGGACCCTATGTGGAGGTGGCATTCTACCACAAGCCTTCGCGGACATTGTTGGTGACGGATGCCGTCATTTTTGTTCCTCGGCAGCCACCTGAGTGTATCAGCAAAGAGTCGTTGCTGGCATCTGCCAAGAACGGCTTGGCAGTGAAGATTTTGAGCAAAGGAAAAGAGGTCCCAGATGAACCAGTTGTGGACAATAAGCTGAACCGTCAGAAAGGTGATTGTAGTGAGTTTGATCTGTACTGTCTAATTGCGGCTATGAGTGCCATGCCATATACAAGAATCACTTTATTTTTAATGTAACCTCTGAAAAGGGTGGGGAGTTCCTGCTTTTCATTAAGAAGAAGAGAGTAGTGCTCATTAAGAAACAAAAATGACTGAAACTAGTGAAATATAGTGCTCATGGTTTAGCAGAAATAGTGTTGTAGCACACTAGATCGGTATGCACCAGCCTCTGTTTATCTTTTTTGGGTCTGGAGTGCATAACGATCTTTGTTAAACAAAATCGTAATGTTCACTGCTTTGTTTCTGTTTCTTTGGTTTGCTGCATGACATTCTAAAAAAAATCCTTGCGAAGCTCATTTGGCAATTCCATTCTCTGTGAAGCTTCAGTGTAAGGGCTTGAGGTATTCCCATGGACTCCATATGCCTACTATATCGCCATATCGGTTATGAGGTCTTTACTCTGTATTATCCTCAATGCTGATATTCAGTTTTTTTCGTCTTCGCTGTAATGCCAAAGATTATTGCCTGTCCTCAGACATTTAATTTTCTGCTCAAAGCATAAGCATCTGATGAAAATTACAGCATAATGTTTTCTTTTCATAGAATAGGGTCATATATCTTCCGCATTGAATTGATAATACTGGAACATTGCAGTAACCTTGTTGGTGTAACAACAGGATGGGAGCGAATGGTACTGCAAATATTGTTTCTTGGTCCCTCAAATCTTCTGGAGCCAAACGCAAGTTTTGCTCAAATGTCTCAGAAGTTGATTGTCTCCCCAATTGTGAAGACACTTGTTTTCAGCAAAGTTCCAGAGAAGGTATGTTCATGTGGTGAATGGAAACTATAATACACTAGTATCTGCTGAACCTGGCTGAACATTACCTTCTGTGCTTTTGATCTATAGGATTCATAAAACTTAGAATTACAACTTGAATGTTTTCCACGGGACGCTACGACCACACATTTTATCCTTTGGGTGTCAATATCTTCAGCTTGTCATTACAAGCTGCCTCTAGTCAGAAGCATTTCCTTTTTCAGTTGCAAACCTGCAATGTGTATGTAAATGAGTCAATCATGAAAAGTTGCATGCCCAGACTAGAATATGAAGCAGCTTTAGGCATCCTTCCTATGTGCTACCATAATTTATGCACTGTCTGACTCATTATCTAAAAAAATTGCACTGGCTGACTTGCAAGTTTTATATACCATTGAAGTGCTGAAGTGGAATGACCTGAGATCCCACCAAGTAGTATTTCTGATATTTCTATTTTGAAAAAATAAAAAAATCTTAATTTTTTGAACTAGCATTTTGGTATTTCACACTTCCCATACATTTCTCCCAATGTCAAGCCATTGAAAATTTGAAATCATCTGCCTCTGCAGGTGAGAGACTGGGTCGACAGGATCGCTGCAGACTGGCCATTCAGGAGGATAATCCCAGCTCACTTCGCAGCTCCGATTAATGCGAGCCGGTCCGACTTCTTGGCTGCCTTTGCTTTCCTAGATGAGTTCCTCCCCGAGCGATCTCCAGCATCGCCCGGCCTCTCACTCCTCTTTGCCTCGCTCATGGGCAAGGCGGCGAGCTACTTCCCCCCTGATGACATGAAGACCCTGTCATCCCTGGACGAGTTCTTGGTTTCAGTTGGTGCTGTCAAGAAGACAGTTTCAGGCAGAAAGCGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020171