BGIOSGA020192

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Revision as of 03:05, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020192| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020192, complete gene.| tag = OS05G05...")
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Gene Name

BGIOSGA020192

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020192, complete gene.

LocusTag

OS05G0516400

Ensembl Transcript ID

BGIOSGA020192-TA

Ensembl Protein ID

BGIOSGA020192-PA

Length

4823

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27073596..27078418

Sequence Coding Region

27073596..27073713,27074483..27074977,27075300..27075386,27075483..27075553,27075656..27075732
,27075954..27076101,27077411..27077572,27077981..27078418

Genome Context

<gbrowseImage1> name=IndicaChromosome05:27073596..27078418 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:27073596..27078418 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATCGCCATCGTCGCGGCCATCGTGGCGTTGCTCGTGCTCGGCGCAGTCGCCGCCGGGCTGCTGTGCTTCTGCTCGCGCCGCCGTCGCCGCCGCCGCCGCCAGCCAACATCGCCGGGTGATTTCCTCGGACCCTTACCGGTGACATCGCGTCATCACCAGCAATCACAATTCATCAAGCCAACAGTAACATACCCACCACAGCTGAATGCACACTCGCCGCTGCAAAGCAGCAGCAACTCCGACCCACCGTCACCGCTGCTGCAACCGTCTCCGCCTCCACCGGCGGCGAGCGGCGGCACGGTGTCGTACGGCGACCTGGTGGCGGCGACTAACGGCTTCTCCGAGGGCAACCTGCTCGGGGAGGGCGGGTTCGGGCACGTGTACCGCGGCGAGCTGCTCCTGCACGACGGCCGGAGGCAGCCGGTGGCCATCAAGAAGCTCCGGCCGGGGAGCCGGCAGGGCGAGCGCGAGTTCCGCGCCGAGGTGGACATCATCAGCCGCGTCCACCACCGCAACCTCGTCTCCCTCGTGGGCTACTGCATCCACGCCGACCACCGCCTCCTCGTCTACGAGTTCGTCCCCAACAAGACGCTGGACTTCCACCTCCACGGGAGCAGCCGGCCGACGCTGGATTGGCCACAGAGGTGGATGATCGCCGTCGGGTCGGCCAAGGGGTTGGCCTACCTGCACGAAGACTGTCGTCCAAAGATTATTCACCGAGACATCAAGGCAGCCAACATCCTTCTCGATTACAAATTCGAGCCAAAGGTTGCGGACTTTGGGCTAGCCAAGATCCAACCGGGAGACGACACACACGTTTCCACCCGCGTGATGGGCACCTTCGGCTACTTGGCGCCGGAGTATGCTACTACTGGCAAAGTAAACGACAGATCAGACGTCTTCTCCTTCGGTGTCGTTCTTCTGGAGCTGATCACCGGGAAGAGGCCTGTCATTTCGACTGAGCCCTTCAACGACGAGACTCTGGTTTCTTGGGCAAGGCCTCTGCTGACAAAAGCTCTAGAGCAGCATGTCTACGACGATCTGATCGATCCAAAGCTTGACGCCTTGTACGACGCCCACGACATGCATCGGCTGATCTCCTGCGCTGCCGCCGCGGTGCGGCACACGGCACGCTCCCGCCCTCGCATGACCCAGATTGTGAGATACTTGGAGGGGGAGCTGTCAATAGATGACCTGAACGCCGGCGTCGCACCGGGGCAGAGCTCGCTGCGCTCGCAGGAGCACTCCGGCGACACGACGGAGCTGGTGCGGCGGCGGCTCAAGAGGGTCGCGTTCCAGCCGGGCAGCGGCGTCACCGTCACCGGCACCGGCGCCGTCACCGACAGCGGCTACCTGAGCGAGGCGACGAGCGAGTACGGGGTGAACCCATCCATCAGCTCGAGCAGCGGCGGCGACGACGACGACACGGCCGGCGAGGTGGTCGGCGGCGTCACCGCCACCAGCCGGCCGCACGCCGCCGCCGCCGCGTCCAGCCCGGACACGTCCGAGGTGGCGTCACCGCACGCCGGCGAGCTCGCCGCCGACGCCGCCAAGCCGATGAGCAGACGAACACGCCTCGGCCGCTTTCCGTGA</cdnaseq>

Protein Sequence

<aaseq>MIAIVAAIVALLVLGAVAAGLLCFCSRRRRRRRRQPTSPGDFLGPLPVTSRHHQQSQFIKPTVTYPPQLNAHSPLQSSSNSDPPSPLLQPSPPPPAASGGTVSYGDLVAATNGFSEGNLLGEGGFGHVYRGELLLHDGRRQPVAIKKLRPGSRQGEREFRAEVDIISRVHHRNLVSLVGYCIHADHRLLVYEFVPNKTLDFHLHGSSRPTLDWPQRWMIAVGSAKGLAYLHEDCRPKIIHRDIKAANILLDYKFEPKVADFGLAKIQPGDDTHVSTRVMGTFGYLAPEYATTGKVNDRSDVFSFGVVLLELITGKRPVISTEPFNDETLVSWARPLLTKALEQHVYDDLIDPKLDALYDAHDMHRLISCAAAAVRHTARSRPRMTQIVRYLEGELSIDDLNAGVAPGQSSLRSQEHSGDTTELVRRRLKRVAFQPGSGVTVTGTGAVTDSGYLSEATSEYGVNPSISSSSGGDDDDTAGEVVGGVTATSRPHAAAAASSPDTSEVASPHAGELAADAAKPMSRRTRLGRFP</aaseq>

Gene Sequence

<dnaseqindica>1..118#888..1382#1705..1791#1888..1958#2061..2137#2359..2506#3816..3977#4386..4823#ATGATCGCCATCGTCGCGGCCATCGTGGCGTTGCTCGTGCTCGGCGCAGTCGCCGCCGGGCTGCTGTGCTTCTGCTCGCGCCGCCGTCGCCGCCGCCGCCGCCAGCCAACATCGCCGGGTATGTGTTCGACCGCTCACTTTACACCACTAACCTGGCCGGTGCAACGCCGGTGCAGCACCGGCCGGCCACCGGCGTGTCGCGCGGACACGGGTTTGCATTAGCGCAAGTCGTCGGCTCTTCGCCGCCGCCGCGCGGTTACGACGCATCGCGCACGCGCGCGCGCACTTTCGCCATGTCGCGTCGTGCGCGGCGGTGACGTTCGTGTCGCGTCGTGCGCGGTGGTGACGTCACGGAGGCAAATGGTGACCGTGACACGTGGTCGTAAAGTTGGATGCACCAAACGGCTTGGGGATATGGAGGGACGATGGACGTGTTGCTCTTGCACAATTCGATCAAACTTAGAGCTTTTCTTCAAGTTAGTGGACGGACCGTGTAGACGAAGTTGGATGCAATCGAGTACTCCCTCCCTCCGTCTTAAAAAAAACTCACTTATATCATTTGTCTAAATTTGTTGTCCTAAAGTTAGGTTAAATTTTTTTATGGAGGGAGTATACACAAAGTGCACACTGTCTAGAGGGTCTAGAGGGTTTTAAAGTTAGTGTGTTCTGGTTTGAAAATTTCTTGAAGTTAACAAATACTTCATCTTTCATAAAATATAATAACCTACTACAATAGATTAATCAACATGTTCAGATTTGTAATAGTAGAAAATATCTCATCCGATTCTAAGTAGATTCAAAAGTAAAATTAGCTCAACACTACTTTATTTCTGCATGAAATTCTTAACATCTCTTATGGAACATTTACCATTGTGTCACCTTACCAGGTGATTTCCTCGGACCCTTACCGGTGACATCGCGTCATCACCAGCAATCACAATTCATCAAGCCAACAGTAACATACCCACCACAGCTGAATGCACACTCGCCGCTGCAAAGCAGCAGCAACTCCGACCCACCGTCACCGCTGCTGCAACCGTCTCCGCCTCCACCGGCGGCGAGCGGCGGCACGGTGTCGTACGGCGACCTGGTGGCGGCGACTAACGGCTTCTCCGAGGGCAACCTGCTCGGGGAGGGCGGGTTCGGGCACGTGTACCGCGGCGAGCTGCTCCTGCACGACGGCCGGAGGCAGCCGGTGGCCATCAAGAAGCTCCGGCCGGGGAGCCGGCAGGGCGAGCGCGAGTTCCGCGCCGAGGTGGACATCATCAGCCGCGTCCACCACCGCAACCTCGTCTCCCTCGTGGGCTACTGCATCCACGCCGACCACCGCCTCCTCGTCTACGAGTTCGTCCCCAACAAGACGCTGGACTTCCACCTCCACGGTACTTTCTACTCTCTCAGTTTCATATTTTAAGTCATTTTAATTTTTTTTTCTTAGTCCAACCTTTCTAAGTTTGATTAAATTTATATAAAAATATAGTAAGAACTATCACATCAATTTAGTTTCACTGGATGTATATATTCTGATACAACGTTTGTTTTGTGTTAAAAATATTGCTCAAACCTAAAATAAATTGACTTGAAAAAAGTCAAAGTGATTTATAATATAAAAATAAAAGGAGTACTGCACTTCTCGTTTTTTAATTTTCGCGTTGTCTGCGCCATTCACGAAATGAGAGCTTCTTCTCTTCTTCTCCGGTGCAGGGAGCAGCCGGCCGACGCTGGATTGGCCACAGAGGTGGATGATCGCCGTCGGGTCGGCCAAGGGGTTGGCCTACCTGCACGAAGACTGTAAGTTACTTGTTCTCTTCTTCTCTCTATCTTGGTCTGAAATTTTCAAGATTTTTTCTTTGATTTAAATTCATGTTGATTGTTGATTGACTTCAGGTCGTCCAAAGATTATTCACCGAGACATCAAGGCAGCCAACATCCTTCTCGATTACAAATTCGAGCCAAAGGTAAACGAAGGATGAGATCATTATCAGTCACACCGGCCGGCAAGAAGATTACCACAAAACAATTGCTATATTTCAGAACGAGCATTTTTGCTGTGCATGCAGGTTGCGGACTTTGGGCTAGCCAAGATCCAACCGGGAGACGACACACACGTTTCCACCCGCGTGATGGGCACCTTCGGGTAACACATTCTTAGCGTGACCCTATTTTTTATTTTTAAGATAATGGAATGAAACAACGTGATTAATTAAAGAGATACAACCAATTATTATAGAATTCATAAAAAAAAAAGCCCCCACACAAAGTTCACATTGTGTTTGTGTTTGTGTTTCACGAGAGTTTAGAATAGTTTATCTGATGTGATGATGCAATCGACGCTTGTTTATTTTTTCTTTCTTTCAGCTACTTGGCGCCGGAGTATGCTACTACTGGCAAAGTAAACGACAGATCAGACGTCTTCTCCTTCGGTGTCGTTCTTCTGGAGCTGATCACCGGGAAGAGGCCTGTCATTTCGACTGAGCCCTTCAACGACGAGACTCTGGTTTCTTGGGTATGTATACCATGCATGAATCTCTATGGTTCTTTCAGTGGTTCAGTTTAGTCCAGCCATCCATAGTTAGTATTACAACTTACAAATAAAGAACTTGGCGGTACTATGCATGAAAAACATAGCATTTTTGCATAGTGAGAACTGAGAAGCAGCTGTCCTGCTAATCAGGGCCGGAGCTATAACAAAATAGAGGGTGATGGCACTTGTTTAATTTACTTTATTTTAGATTGAGTTTAAGTTGATACATGTGTCTAAGTTTGTATTGAAGGGGGTGCATGGTGAAAATAAATAAGGTATAGCTAAACATTTTTCTTGAATGGGTTCCTGTACACCCCCGTAATATACTCTAGCTCCGCCCCTGCCTGGCTATGACTTTAAAAAACTTTTAGACATGATACTTTGTCGAAACTTAACCCCTGCAGGTCCACTTCTTGCTATCAGATTTTCTACAGACTAGTACAGTGTCATAGTACAATCCAATTCTGACTTCTGACTTCATTTTTTTAAATATATATATATATTAAATTTGTTTGGTGCTCCATGGTGTCCGGGCACCATTGTTGAAATTGAGTATATACCCAATTCAAATGAGTATGAAACTTTTTCAATTACTTAGGTATTAACATTAACTACTTTACTAACTAGTTTAAAGCAAGTTTGAACTGAATTTGAACTTGTTTTTGTTAGATTTTGATTCTAGGTATATAGCATCCATACATATAATTAGTTAGGTATGTAATCATGGATTGTAAAATAAAGTTAAATTTGAGTTGTTTTGTTGATAAGTATATGTATGAATCAAATTATTATAACTAGGTATATACTCACAATTTGAAAATTTTGAAAAATTTGAGTTATTTTGTGCATTAGATACCATGGTGCCCGGGCACCATGGTGCCCCATATGAGTGTTCTATATATATATATGTATATATGTATATATGCATATATGTATATATGTATATATGTATATATATGTATATATGTATATATGTATATATATGTGTATATATATGTATATATATATGTATATATATATGTGTGTATATATATATATATATGTATATATATATATATATATATATATATATATATGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACATATATATATATATATATATATATATATTGTGGATTCAGTGACAGCATCGCGTTACATCTCGTTAACTAATGGCTGATTATTCTGTAACTGTAAGGACTACTAAATTTGTTCTTCTTTTATGTTTTGGACGATGCAGGCAAGGCCTCTGCTGACAAAAGCTCTAGAGCAGCATGTCTACGACGATCTGATCGATCCAAAGCTTGACGCCTTGTACGACGCCCACGACATGCATCGGCTGATCTCCTGCGCTGCCGCCGCGGTGCGGCACACGGCACGCTCCCGCCCTCGCATGACCCAGGTGAGCCTCCCTTGGAGAAGAATAAAATGTCATGATGTTACATATCAACTAAATAGTTATTATTTTTTTTAAAAAAATAATTAGATAGAATTGATATATGATATATTACTTCATCAATATATAAATTAAAAATTTGACTTCTATAAGTTGTAATAAAAACAATAACTTGTGAAGTCGAATTGGATTGATATATCTCATACCAATCTATTTTATCATTTTCTTTAATTATTTTTATATAATTATTTAGTTGATATATAATAAAAAGGTGGATATGGATATTTAATTATTAGAATTATCTCCCTGCTGTGCAATGCAACTTGCGAAACGACCAAAGAAACAAGTTTCTCTTATTGACTTTTTGCCCAAAAACCTGAGTTCTTTTTTTCTGTTCTTGCAATGGACGAGCAGATTGTGAGATACTTGGAGGGGGAGCTGTCAATAGATGACCTGAACGCCGGCGTCGCACCGGGGCAGAGCTCGCTGCGCTCGCAGGAGCACTCCGGCGACACGACGGAGCTGGTGCGGCGGCGGCTCAAGAGGGTCGCGTTCCAGCCGGGCAGCGGCGTCACCGTCACCGGCACCGGCGCCGTCACCGACAGCGGCTACCTGAGCGAGGCGACGAGCGAGTACGGGGTGAACCCATCCATCAGCTCGAGCAGCGGCGGCGACGACGACGACACGGCCGGCGAGGTGGTCGGCGGCGTCACCGCCACCAGCCGGCCGCACGCCGCCGCCGCCGCGTCCAGCCCGGACACGTCCGAGGTGGCGTCACCGCACGCCGGCGAGCTCGCCGCCGACGCCGCCAAGCCGATGAGCAGACGAACACGCCTCGGCCGCTTTCCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020192