BGIOSGA020219

From RiceWiki
Revision as of 03:05, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020219| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020219, complete gene.| tag = OJ1593_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020219

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020219, complete gene.

LocusTag

OJ1593_C11.1

Ensembl Transcript ID

BGIOSGA020219-TA

Ensembl Protein ID

BGIOSGA020219-PA

Length

4740

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27481165..27485904

Sequence Coding Region

27481165..27481482,27482126..27482172,27482271..27482310,27482392..27482454,27482540..27482677
,27483532..27483690,27483770..27483823,27483983..27484051,27484175..27484304
,27484570..27484610,27484794..27485018,27485221..27485266,27485363..27485514
,27485683..27485904

Genome Context

<gbrowseImage1> name=IndicaChromosome05:27481165..27485904 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:27481165..27485904 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCTCCCACATCATCCTTCCGCCGGACGACGACGACGAGGAGCAGCGCCGGCTGGAGGAGGAGGAGGACGAGGATCCGTGGGCGCGGAGCGGGCCTCCCCCCGCGGCGCCGGAGCACGCGGTGAAGGCGGCGCTGCCGTTCTCCGCGACGTGCGTGCGGATCTCCCGCGACTCCTACCCCAACCTCCGCGCCCTCCGCAACGCCTCCTCCGTCAGCCTCGCCGACGCCGCCTACGTGAAGATCTCCGAGGGGGACTTCGGCTACGTCCTCGACGACGTGCCGCACCTCGTCGACCACCTCCCCGATGCCCCAACTTATCCCAATCCACTACAAGATCATCCAGCCTATTCAACTGTCAAGCAATATTTTGTTAATGAAGATGACACTGTACCCCAAAAGGTGGTCGTTCAGAAGAACAGCCGGCGGGGGGTTCACTTCCGTCGTGCTGGACCTCATCAGAAGGTTTATTTTGAGTCAGATGAAGTGAAAGCATGCATTGTAACTTGTGGAGGCCTTTGCCCTGGTCTTAACACTGTCATCAGAGAGCTCGTCTGTGGTTTGGCGCACATGTATAATGTCAGCAAAATCTATGGTATACAGAATGGATACAAGGGCTTCTATTCTAGCAATTACCTTACTCTGACGCCAAAGAGTGTCGATGACATCCACAAGAGGGGTGGGACAGTTCTTGGCACATCACGAGGTGGCCATGATACAAAAAAGATTGTTGACAACATTCAGGATCGTGGAATTAATCAGGTCTATATCATTGGAGGAGATGGAACACAGAAGGGTGCATATGAGATCTTCAAGGAAATCCGAAAACGTGGGCTAAAGGTTTCTGTTGCTGGGATTCCCAAGACAATAGATAATGACATAGCGATCATTGACAAGTCATTTGGTTTTGATACGGCCGTAGAAGAGGCCCAGCGTGCCATTGATTCAGCTCATGTGGAAGCTTGCAGTGCTGAGAATGGAATAGGCTTAGTAAAACTGATGGGCCGTTATAGTGGGTTCATTGCAATGTATGCTACTCTTGCAAGTCGAGATGTGGACTGCTGCTTAATTCCAGAGTCCCCATTTTATATGGATGGTGAAGGTGGGTTGCTTCAATATGTAGAGAGAAGGCTGAAAGAGAACAAGCACATGGTTATTGTTGTTGCTGAGGGAGCAGGGCAGGATCTTATAGCCAAAAGTTTATCTACTTCTGAGCAGCAAGATGCATCAGGAAATAAGCTACTGCTTGATATTGGTCTTTGGCTGACACACAAGATAAAGGACCACTTCAAGAGCAAAAAGATAGAGATGACTATTAAATATATAGATCCTACCTACATGATCCGAGCTATTCCAAGCAATGCATCAGACAATGTCTACTGCACGCTGCTGGCCCACAGTGCTATTCATGGTGCAATGGCCGGCTATAGCTTCACTGTTGGAAATGTCAACGGCAGACATGCCTACATACCTTTCTATAGGGTGACATCCACACGGAACAAGGTCAAGATCACTGATAGGATGTGGGCGAGGCTGCTATCATCAACCAACCAGCCAAGCTTCCTAAGCCAGAAGGACATCGACGAAGCCAAAGAGAACGATAGGACGGCCAACAAGCCACCACTTCCCACCGGCCTCAGCCATCATGTGGCAAACTCTTTCGACCAGTCTGCATCATCTTCCTCGAACAGCCAGATATGA</cdnaseq>

Protein Sequence

<aaseq>MASSHIILPPDDDDEEQRRLEEEEDEDPWARSGPPPAAPEHAVKAALPFSATCVRISRDSYPNLRALRNASSVSLADAAYVKISEGDFGYVLDDVPHLVDHLPDAPTYPNPLQDHPAYSTVKQYFVNEDDTVPQKVVVQKNSRRGVHFRRAGPHQKVYFESDEVKACIVTCGGLCPGLNTVIRELVCGLAHMYNVSKIYGIQNGYKGFYSSNYLTLTPKSVDDIHKRGGTVLGTSRGGHDTKKIVDNIQDRGINQVYIIGGDGTQKGAYEIFKEIRKRGLKVSVAGIPKTIDNDIAIIDKSFGFDTAVEEAQRAIDSAHVEACSAENGIGLVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYMDGEGGLLQYVERRLKENKHMVIVVAEGAGQDLIAKSLSTSEQQDASGNKLLLDIGLWLTHKIKDHFKSKKIEMTIKYIDPTYMIRAIPSNASDNVYCTLLAHSAIHGAMAGYSFTVGNVNGRHAYIPFYRVTSTRNKVKITDRMWARLLSSTNQPSFLSQKDIDEAKENDRTANKPPLPTGLSHHVANSFDQSASSSSNSQI</aaseq>

Gene Sequence

<dnaseqindica>1..318#962..1008#1107..1146#1228..1290#1376..1513#2368..2526#2606..2659#2819..2887#3011..3140#3406..3446#3630..3854#4057..4102#4199..4350#4519..4740#ATGGCGTCCTCCCACATCATCCTTCCGCCGGACGACGACGACGAGGAGCAGCGCCGGCTGGAGGAGGAGGAGGACGAGGATCCGTGGGCGCGGAGCGGGCCTCCCCCCGCGGCGCCGGAGCACGCGGTGAAGGCGGCGCTGCCGTTCTCCGCGACGTGCGTGCGGATCTCCCGCGACTCCTACCCCAACCTCCGCGCCCTCCGCAACGCCTCCTCCGTCAGCCTCGCCGACGCCGCCTACGTGAAGATCTCCGAGGGGGACTTCGGCTACGTCCTCGACGACGTGCCGCACCTCGTCGACCACCTCCCCGATGCCCCAGTGAGTGGCCCCCTCCCGACACTCCCTTCCCGTTGCTTCGATTCGCAAGCTGCTGCTGCGGTGATGCTCCGATCGTTCCGGTTTGTGATGGCCTTTGCGTTGTTGAACTGTGCCACTGTGTGAAGTGCAGCTCTAGCTAAGTATACTCGAATAGCGAAGTGATCTGGGTGGGGATCCCTGATTGGGGGCTGTCATTCGCGATGTTTGCGGGATTTTTTTCTATCAGATTTTCTGGTTTGGAAATCCATTTTGGATACTGTGCTGATTTTAGACTGTCGAATTTGAGCTTGGACATGCAGTGAGCCAATCAGTCTGTTAGGAGCGAAAGGGGGCATGATAGAACAGAGCAATTATGTTGTCAAAATTTCGCTGCAATGCTATTGACGCTTTATGTTATGTAGTAACAGAATAAGTTGTTGCTTTGGGCTTTTTGGTCTCTGCTTTTGGGATAGGAAATTTGATTGAGTAGATTGGAGGATATCTCCACTGGAAGAACTGTCACTATTGGCTGGTTGCTCATCACTGCCAAAGCATGAGTTAGTTATAGCCAATTCACTGTGCTGGATTGAATTGCTTCTGGAAAGGTGAAACCATGGTCCATGTGAATTGAGCTGATGATTTGCTATTTTGTTCATATGTGCAGACTTATCCCAATCCACTACAAGATCATCCAGCCTATTCAACTGTCAAGTAAGGCTTTGATCTTCCACTTTTTTTCTTCTTCTAATATCTGAGCTTGTAATTTGTGCCATGTGTAATCCTGAAACTTTTGTTCTTATCGTTATCAGGCAATATTTTGTTAATGAAGATGACACTGTACCCCAAAAGGTAAAGCAGTGTTAATTATGGTTTACACTGTGATGTTGTAGTCGATGGTGAATTTACAGGTAGCTATTTCTGTGCTTACAGGTGGTCGTTCAGAAGAACAGCCGGCGGGGGGTTCACTTCCGTCGTGCTGGACCTCATCAGAAGGTATGATATGCTGCCCCCTCTTTTAACTATTGAAACTCATCACTTGCGCGTGGGCTAACAGAAACATTTGGACTTGAACCTTTAGGTTTATTTTGAGTCAGATGAAGTGAAAGCATGCATTGTAACTTGTGGAGGCCTTTGCCCTGGTCTTAACACTGTCATCAGAGAGCTCGTCTGTGGTTTGGCGCACATGTATAATGTCAGCAAAATCTATGGTATACAGGTGTGGGCCCTTCTCTAAATGGTTACATAATACTTCAATAGATAGTTAAGGGCTTGTTCACTTTGCTACCATTTTCAACCTTACCAAGTTTTGGCATTGTTAAATTTTGGTAGCCAAAATTTTGGCAACATTTCATATGCACTTACTAAAATTTGGCAACAAACTAAACGTAGCCAAAATTTTGGTAACTTTGCCAAAAAATAGTATGGTTAAAAATGGCATCAAAGTGATCAGGCCCTTACAGTATCATATTTTTTCACTGAGAAAGACAGCTTGCGCATGTTAAGGACCTGTTCACTTTGATGCTATTTTCAACCTTACCAAATTTTGGTAAAGTTGCCAAAAAAGTGGCTACATTTAGTTTACTGCCAAATTTTGGTAACTATATAAGAAATCCCGCCAGTTGCTAAAATTTGGTAAGGTTGAAAATGACATCAAAGTGAATAGGCCCTAAATACTCTAGTTAAATACTACTCTTGCATTTTCCAGACATGCTTGATCCATCTTTCTAATTTTTCTTTGGTCCAGAAAGGATATGCCAGCTTACCATAAGATCTTCAGATTCTTATCACTGCTTATCAATCATTTTGTATTGCATAATGTCCATTTCCATAAATATTCAAACCTTATAGTATTATTCTACTAAAATAGTGGCAAATTGAATAAGCTGCTTTGGATTGTTTTAGTAAAATGCAATTATAAATTTGTATACTTGTATTATAAGTTTAGAACAATGGATATGTGTTCTGACAAGGGCTTGCCATGGCAACTATAAACATGAATCATTACTGCGTTCAGTTCTCATTATATTTCCAGATCTTCTACCTCTTAATACCTTATATTACCTATTATAGAATGGATACAAGGGCTTCTATTCTAGCAATTACCTTACTCTGACGCCAAAGAGTGTCGATGACATCCACAAGAGGGGTGGGACAGTTCTTGGCACATCACGAGGTGGCCATGATACAAAAAAGATTGTTGACAACATTCAGGATCGTGGAATTAATCAGGTAAATGCGGTTGTTTGCACCTATGTGATATAGCTGTTCTGATTGGTCATTGTCTCATGTGCTTATGTACATTACCCAGGTCTATATCATTGGAGGAGATGGAACACAGAAGGGTGCATATGAGATCTTCAAGGTAATTTACCACTGTGGTACAACCGTACAAGTGCTATGTATGCTGTTTGCTGAAAGAATGTGATAATAGATCCTATTCATCAATGCATTGCAGTAGCATACGGTATATCTATTTAAATATTATTTTATCGTTACCTCATTGTTTTCATATTGGTGGCAGGAAATCCGAAAACGTGGGCTAAAGGTTTCTGTTGCTGGGATTCCCAAGACAATAGATAATGACATAGCGGTATTTTTTTTGTGCGATGTGTCTATTTTTTTGTGTAGAAATTTGTTGTACGCATGCTGTTCAGTTGACGGTTCATACGAAATTATGACTTATTGCTTATGTTACCTTTTTCTTGATTCTTAGATCATTGACAAGTCATTTGGTTTTGATACGGCCGTAGAAGAGGCCCAGCGTGCCATTGATTCAGCTCATGTGGAAGCTTGCAGTGCTGAGAATGGAATAGGCTTAGTAAAACTGATGGGCCGTTATAGTGGTACGTATTTTAGTATTCCTTGCCATCTCTCTGAGTGTAATGCTGTTATGTTTCTTCCATTGTTGACCATGCTGAAAGCACCTATCAGTTTAAAAATTACAAGAAAAAACAAGCCAGCATTTTGGCCTTTTGCCTGTGATTGTACTCATGCAGAAGATCTCTTGATTTTTCTGTGTTTCAAGCTTGAATGCTTGATTACTCTGCTATCTGTTCTCTAGTATTTATTTCAGTCTATTGCCCTTAAACTGTTATATTCATCTTGCAGGGTTCATTGCAATGTATGCTACTCTTGCAAGTCGAGATGTGGTAAGCAGATGCAACCATTCTGTCTAATTCCTGTATATTTTATCCCCCCTCTTCATACAGTAGTGATATTCCTACTTTTCTGGTTTGCCCCACAAATCCACTTCTACCTAAGAGTAGTTTTTTTTTTCCGAGGTCTACCTAAGAGTTGTACTTATTTATTTTTTGGATCTCAAATCTCCACAGGACTGCTGCTTAATTCCAGAGTCCCCATTTTATATGGATGGTGAAGGTGGGTTGCTTCAATATGTAGAGAGAAGGCTGAAAGAGAACAAGCACATGGTTATTGTTGTTGCTGAGGGAGCAGGGCAGGATCTTATAGCCAAAAGTTTATCTACTTCTGAGCAGCAAGATGCATCAGGAAATAAGCTACTGCTTGATATTGGTCTTTGGCTGACACACAAGATAAAGGTACACAAAACACTTAATTTTGCTTCTGAATTCAGGTCTGCTGCTCTTGTTAATATAGGTAACTAAAACGCTAAGCAATTCCCACTGAAAACTGTGATGACTTTTGCCATACATTTCACTTTGACTTTCAAGTATCACTCCTTTTACTCACTTCTTGCATGCATCTTTTTCTTCTACTCACTATTCATAACTTCTATTGTAGGACCACTTCAAGAGCAAAAAGATAGAGATGACTATTAAATATATAGGTAACTATGTTTGCTTCACACAGGATAAGGTTGTTACACATCTTATTACTGGTCTCTATTGTACTAAGTTGTGAAGTTTCCTAATATTATTTGCAGATCCTACCTACATGATCCGAGCTATTCCAAGCAATGCATCAGACAATGTCTACTGCACGCTGCTGGCCCACAGTGCTATTCATGGTGCAATGGCCGGCTATAGCTTCACTGTTGGAAATGTCAACGGCAGACATGCCTACATACCTTTCTATGTGAGTAACTTCAAGTGATCTTATTTGTTCACATGGAAAATGCAGAAATGTAGTGCTCGTTACCCCCGTGCATCCCATTTTTTTCCTGATTATCCAAGAGCTGTTCTTACTGCATTCTCATACTAAGCATCAGTTCCAACTTAACGTGAAATCTTCCCTTGATGGCAGAGGGTGACATCCACACGGAACAAGGTCAAGATCACTGATAGGATGTGGGCGAGGCTGCTATCATCAACCAACCAGCCAAGCTTCCTAAGCCAGAAGGACATCGACGAAGCCAAAGAGAACGATAGGACGGCCAACAAGCCACCACTTCCCACCGGCCTCAGCCATCATGTGGCAAACTCTTTCGACCAGTCTGCATCATCTTCCTCGAACAGCCAGATATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020219

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020219&oldid=48975"