BGIOSGA020223

From RiceWiki
Revision as of 03:05, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020223| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020223, complete gene.| tag = OsI_206...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020223

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020223, complete gene.

LocusTag

OsI_20683

Ensembl Transcript ID

BGIOSGA020223-TA

Ensembl Protein ID

BGIOSGA020223-PA

Length

3393

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27516353..27519745

Sequence Coding Region

27516353..27516860,27516964..27517096,27517184..27517255,27517347..27517418,27517704..27517867
,27517957..27518222,27518312..27518438,27518790..27518858,27518956..27519148
,27519244..27519745

Genome Context

<gbrowseImage1> name=IndicaChromosome05:27516353..27519745 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:27516353..27519745 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCAGGTACCCCGACGATCCACGCGACAGAGTATGGACACCTTGGGACTCGCCATCAAATTGGACCGAGATATCAACGACGAGGCCGGTGCAGCAGACATACGACGACCTGTTCGAGGTGCCAACGGCGGTGATGCAGACGGCGATTGTCCCAATGTTTGCCACAGACAACATCGAGCTCGCATGGGTAGCCTACACACAGCCCAAGGACCCGTCGCCGGGGTACATCGCCATCATGCACTTCTCCGAGCTGGAGCTCAGCCCCCCCAGCCGTGATGTGCGAGAATTCTACATCAACCTCAACGGCAACATGATGTACAGCAAGGGCTACAAGCCAGTGTATCTCTACGCCCACGCCATCTACAACACCAACCCCTTCCTACGATACCCGCAGTACAATATCTCCATCAACGCCACCTATAACTCGACGATGCGACCGTTCATCAACGCCATGGAGGTGTACTCCGTTTTCTCCACCACCACCATTGGCACATATGGTCAGGACGCTTCTGCCATGATGGTGATCAAGGAAAAGTATCAGGTGAAGAAGAATTGGATGGGTGATCCGTGCATTCCGACAGAATTTACATGGGAAAGTTTGACATGCAGCTATGAAAACTCCAAACACGTAATAAAAATAAACCTGTCCTCCAGTGGTTTGAGTGGTGAGATATCATCTTCTTTTGGGGATCTCAAGGCTCTTCAATACTTGGATTTGTCAAACAACAATTTGACAGGTTCGATTCCGGATGCACTTTCACAGTTACCTTCATTGACAGTATTATATGGAAATAATCCAAACCTCTGCACCAACGACAATTCATGTCAGGCAGCAAAACACAAGAGCAAGCTTGCCATCTACATAGTCGCTCCTGTAGTTCTGGTTCTGGTGATAGTATCAGTCACAATACTACTCTTTTGCCTTCTAGGACAAAAAAAGAAGCAAGGATCAATGAACACTTCTATAAAGCCGCAAAATGAGGCGAACTATGTGCCGACAAATGACAGCGATGGGCATGGTTCATCAATGCAGCTTGAGAACCGACGATTTACATATAAAGATCTGGAAAAGATAACGAACAACTTTCAACGAGTGCTCGGCCGAGGAGGGTTTGGGAAGGTCTACGATGGCTTCTTGGAAGAAGGTACTCAAGTGGCAGTCAAATTGAGGTCTGAATCTTCCAATCAAGGTGATAAGGAATTTCTCGTAGAGGCTCAAATTTTAACTCGGATTCACCATAAGAACCTTGTCTCCATGATCGGTTATTGCAAGGATGGGAAATACATGGCACTTGTCTATGAGTATATGTCAGAAGGAACCCTTCAAGAACACATTGCGGGTAAAAGAAACAACGGGAGACATTTAACCTGGAGGGAGAGGCTTCGAATAGCGTTAGAATCCGCTCAAGGGCTAGAGTACCTACACAAGTGGTGCAATCCGCCTCTTATTCATAGAGATGTGAAGGCTACCAACATTCTATTGAATGCGAGGCTAGAGGCTAAGATTGCTGATTTTGGCTTGTCCAAGTCATTCAATCTTGAGAATGGCACCCATGTATCTACGAACACGCTTGTTGGTACTCCCGGATACGTGGATCCAGAGTACCAAGCAACAATGCAACCATCGACCAAAAGTGATGTCTATAGCTTTGGTGTCGTCCTGCTAGAACTGGTAACAGGAAAGTCGGCTGTCCTACGTGATCCAGAGCCCATAAGCATTATCCATTGGGCGCAACAACGCCTAGCACAGGGGAATATCGAGGAAGTGGTGGATGCATGTATGTGTGGCGACCATGATGTAAATGGTGTATGGAAGGTTGCGGACATCGCATTCAAGTGTACCGCGCAGGTATCAGCGCGACGGCCCACTATGACTGACGTGGTGGCGCAGTTACAAGAGTGCCTCGAGCTTGAGGAGGAGCATTGTGCCGTCAATGATGCAAACAACAACTTCTACACCAGCAATAACAGCAACCCTAACTCAAGTTATGACACATACGCCGCTGACCACTCTATCGATGTGAGTCAGAACAGTGTTGCATTTGAGATGGAGAAAAATTTTGGAAGGATGCCATCAACAGCCCCCGGTCCCGCCACACGATAA</cdnaseq>

Protein Sequence

<aaseq>MSRYPDDPRDRVWTPWDSPSNWTEISTTRPVQQTYDDLFEVPTAVMQTAIVPMFATDNIELAWVAYTQPKDPSPGYIAIMHFSELELSPPSRDVREFYINLNGNMMYSKGYKPVYLYAHAIYNTNPFLRYPQYNISINATYNSTMRPFINAMEVYSVFSTTTIGTYGQDASAMMVIKEKYQVKKNWMGDPCIPTEFTWESLTCSYENSKHVIKINLSSSGLSGEISSSFGDLKALQYLDLSNNNLTGSIPDALSQLPSLTVLYGNNPNLCTNDNSCQAAKHKSKLAIYIVAPVVLVLVIVSVTILLFCLLGQKKKQGSMNTSIKPQNEANYVPTNDSDGHGSSMQLENRRFTYKDLEKITNNFQRVLGRGGFGKVYDGFLEEGTQVAVKLRSESSNQGDKEFLVEAQILTRIHHKNLVSMIGYCKDGKYMALVYEYMSEGTLQEHIAGKRNNGRHLTWRERLRIALESAQGLEYLHKWCNPPLIHRDVKATNILLNARLEAKIADFGLSKSFNLENGTHVSTNTLVGTPGYVDPEYQATMQPSTKSDVYSFGVVLLELVTGKSAVLRDPEPISIIHWAQQRLAQGNIEEVVDACMCGDHDVNGVWKVADIAFKCTAQVSARRPTMTDVVAQLQECLELEEEHCAVNDANNNFYTSNNSNPNSSYDTYAADHSIDVSQNSVAFEMEKNFGRMPSTAPGPATR</aaseq>

Gene Sequence

<dnaseqindica>1..508#612..744#832..903#995..1066#1352..1515#1605..1870#1960..2086#2438..2506#2604..2796#2892..3393#ATGTCCAGGTACCCCGACGATCCACGCGACAGAGTATGGACACCTTGGGACTCGCCATCAAATTGGACCGAGATATCAACGACGAGGCCGGTGCAGCAGACATACGACGACCTGTTCGAGGTGCCAACGGCGGTGATGCAGACGGCGATTGTCCCAATGTTTGCCACAGACAACATCGAGCTCGCATGGGTAGCCTACACACAGCCCAAGGACCCGTCGCCGGGGTACATCGCCATCATGCACTTCTCCGAGCTGGAGCTCAGCCCCCCCAGCCGTGATGTGCGAGAATTCTACATCAACCTCAACGGCAACATGATGTACAGCAAGGGCTACAAGCCAGTGTATCTCTACGCCCACGCCATCTACAACACCAACCCCTTCCTACGATACCCGCAGTACAATATCTCCATCAACGCCACCTATAACTCGACGATGCGACCGTTCATCAACGCCATGGAGGTGTACTCCGTTTTCTCCACCACCACCATTGGCACATATGGTCAGGACGGTATGTACATAGACGATAGAGAACACACACACACACACACAAGTGAAATGGCCTAATTGTTTTGGCGCGTGTTACTGATCGAAATCATCTTTGCACTTGACAGCTTCTGCCATGATGGTGATCAAGGAAAAGTATCAGGTGAAGAAGAATTGGATGGGTGATCCGTGCATTCCGACAGAATTTACATGGGAAAGTTTGACATGCAGCTATGAAAACTCCAAACACGTAATAAAAATGTAAGTAATTGAGTCCACACGTACTGAATATTGGAGTTGCATAACGGAAGTATGAAACAGGGTCATCTGATCACATTCTCTTTGCAGAAACCTGTCCTCCAGTGGTTTGAGTGGTGAGATATCATCTTCTTTTGGGGATCTCAAGGCTCTTCAATACTTGTACGTTCTGAGTTGAATAATGTTAATTTGTTAACCTTGTTTGTACGAATTTTGCATTAAAATTTGCAAAGTCTTGCTTCATATCTTCTAGGGATTTGTCAAACAACAATTTGACAGGTTCGATTCCGGATGCACTTTCACAGTTACCTTCATTGACAGTATTGTAAGTTTCGCAACTTCTGTCAAATTTTACTTTATTGCCTAGCATCATTTGTATTAACTAACATCTACATATACCTTATGGGCATATGGCTTCTTTAGAGATCTGACAGGAAATCAACTCAATGGTTCAATTCCATCTGGACTTCTCAAAAGAATTCAAGATGGTACCCTAAATATAAAGTAATTAAGTACACCACGTTCTTCTCACAGCAATCTTTGAATGTCTAAACTCAACCATTTTGAGAAAATAGATTGATTTGACTAGGCGTCTTCATTCCATCAACAGATATGGAAATAATCCAAACCTCTGCACCAACGACAATTCATGTCAGGCAGCAAAACACAAGAGCAAGCTTGCCATCTACATAGTCGCTCCTGTAGTTCTGGTTCTGGTGATAGTATCAGTCACAATACTACTCTTTTGCCTTCTAGGACAAAAAAAGAAGCAAGGTGAGGGTTACAACCATAGCAACTATCTGCTCTATTTCTCTGTTCTTGAACATTACTGATGCTAGTTGCTCCATTCTTCGCTTATGAAGGATCAATGAACACTTCTATAAAGCCGCAAAATGAGGCGAACTATGTGCCGACAAATGACAGCGATGGGCATGGTTCATCAATGCAGCTTGAGAACCGACGATTTACATATAAAGATCTGGAAAAGATAACGAACAACTTTCAACGAGTGCTCGGCCGAGGAGGGTTTGGGAAGGTCTACGATGGCTTCTTGGAAGAAGGTACTCAAGTGGCAGTCAAATTGAGGTCTGAATCTTCCAATCAAGGTGATAAGGAATTTCTCGTAGAGGTAGAATTTCGTCAGTTGAATTTGATCTTGCTACATAGAGATTTCTACTAAGAAAAGTTCGAGTAATTAGTTAACATTTGCTTGTTTAGGCTCAAATTTTAACTCGGATTCACCATAAGAACCTTGTCTCCATGATCGGTTATTGCAAGGATGGGAAATACATGGCACTTGTCTATGAGTATATGTCAGAAGGAACCCTTCAAGAACACATTGCGGGTACGTACTTATGTTTTTGTTCCCGATCAAGTTGCAGAGTACTCCTTCCATTTTATATTTTAAGTTGTTTGACTTTTTTTTCTTAGACAAACTTCTTTAAATTTGATCAAGTTTATAGAAAAATATAGTAGTATTTTCAATACAATACAAACTTATTATCAAAATATATTCAATGTTAGATTTAAAGAATCTAATTTGATATTTTAGATTGCTAGATTTTTCTATAAACTTGATCAAAAAGTCAAACGACTTATAATATGAAACAGAGGGAGTACACTGTAAAACATCATGTAGTGGATCATTTTATAGTCCTCATGGTCTCACCCCTCTTTGTTCTCTACCTATTTGTAGGTAAAAGAAACAACGGGAGACATTTAACCTGGAGGGAGAGGCTTCGAATAGCGTTAGAATCCGCTCAAGGTAACTACTTTAAATTTGTAGTAGTGCTACTTGAGGTTTGATTTTACATTTTCTCTAAAAGGTTGGCTAGTAGTTAAATTCTTTGGTTAATGGTCAGGGCTAGAGTACCTACACAAGTGGTGCAATCCGCCTCTTATTCATAGAGATGTGAAGGCTACCAACATTCTATTGAATGCGAGGCTAGAGGCTAAGATTGCTGATTTTGGCTTGTCCAAGTCATTCAATCTTGAGAATGGCACCCATGTATCTACGAACACGCTTGTTGGTACTCCCGGATACGTGGATCCAGAGTATGCTAATTTATATGTATTTCTTGATGTTGTTCTTTAGTATTTTCTATGAGGAACACAAAGTTTAAGGTTTGTGGTACTGATTGAATGTGCAGGTACCAAGCAACAATGCAACCATCGACCAAAAGTGATGTCTATAGCTTTGGTGTCGTCCTGCTAGAACTGGTAACAGGAAAGTCGGCTGTCCTACGTGATCCAGAGCCCATAAGCATTATCCATTGGGCGCAACAACGCCTAGCACAGGGGAATATCGAGGAAGTGGTGGATGCATGTATGTGTGGCGACCATGATGTAAATGGTGTATGGAAGGTTGCGGACATCGCATTCAAGTGTACCGCGCAGGTATCAGCGCGACGGCCCACTATGACTGACGTGGTGGCGCAGTTACAAGAGTGCCTCGAGCTTGAGGAGGAGCATTGTGCCGTCAATGATGCAAACAACAACTTCTACACCAGCAATAACAGCAACCCTAACTCAAGTTATGACACATACGCCGCTGACCACTCTATCGATGTGAGTCAGAACAGTGTTGCATTTGAGATGGAGAAAAATTTTGGAAGGATGCCATCAACAGCCCCCGGTCCCGCCACACGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020223

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020223&oldid=48979"