BGIOSGA020225

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Revision as of 03:05, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020225| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020225, complete gene.| tag = OS05G05...")
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Gene Name

BGIOSGA020225

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020225, complete gene.

LocusTag

OS05G0525600

Ensembl Transcript ID

BGIOSGA020225-TA

Ensembl Protein ID

BGIOSGA020225-PA

Length

4317

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27530211..27534527

Sequence Coding Region

27530211..27530298,27530381..27531155,27531293..27531576,27531766..27531904,27531989..27532060
,27532143..27532214,27532392..27532472,27532560..27532720,27532828..27533090
,27533328..27533454,27533641..27533709,27533821..27534013,27534113..27534527

Genome Context

<gbrowseImage1> name=IndicaChromosome05:27530211..27534527 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:27530211..27534527 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCTCGGTGGTGGCTGCTGCTGCTGCTCGGCCTCGCCGTCGCCGGCGTCGTTCGCGGCCAGGGCGGCGCGCCTGACACGTCCGGCTTCATCAGCATAGACTGCGGCTTGCCGGAGAAGACCAGCTACGTGGACGACGCCACGAAGCTGAAGTTCACCTCCGACGACGCCTTCACCGACGCCGGCACAATCCACAACGTCTCGTCGGAGTTCGCCACGCCGAAGACGACCACGGACAGGAGCCTGTACAACGTGCGCAGCTTCCCCGCCGGCGCGCGCAACTGCTACACGGTCCCGTCCGTCGTGCCGGGGTCCAAGTACCTGGTCCGTGCCAAGTTCTTGTACGGCAACTACGACGGCCTCAACAAGCCGCCGGTGTTCGACCTCCACCTCGGGGTCAACTTCTGGCAGACGGTGACCGTGCCATCCGCCGACTGGCTGGGGAACGCCGAGGTCATCGCCGTCGTGCCGGATGATTTCTTGCAGGTCTGCCTTGTGAACACCGGCGCCGGGACGCCGTTCATCTCCGGCCTGGACCTGAGGCCCCTGCCGAGCTCGCTCTACGCGCCCGCCAACGCGACGCAGGGGTTGGTCCTGCTCGACCGGAGGAACTTCGGCGCGAGCGGGAGCACCGTGATCAGGTACCCCGACGACACGTACGACCGCGTGTGGTGGCCGTGGAGCAACCCGCCGGCGGAGTGGTCGGACATCTCCACGGCGGACAAGGTCCAGAACACGATCGCCCCCGTGTTCGACGTGCCGTCCGTCGTGATGCAGACGGCCATCACGACGCGCAACTCCTCCATTCCCATCCAGTTCTCCTGGGACACCAAACCCAATCACGTCTACCCTGATCCCGGGTCGATTTTTACCTTGTATGTCACCGAGCTGGAGCTCCTGGCCGGCAATGCCGTTCGCCAGTTCAACGTCACCATCAATGGCGTGATTTGGACCAAAGCCCCATACAAGCCGGTTTATCTGTCCACCGACGCCATGTACAACGGAGATCGACCCTACCGGGGCATCACCCGGTACAACTTCTCTTTGAACGCCGCGGGAAGCTCCACGCTGCCGCCGATACTCAACGCCGCGGAGGCTTTCTCCGTCATCTCCACAGCCGACCTTGCAACAGACGCTCAGGATGTTTCTGCCATCACTGCAATCAAGGCCAAGTATCAGGTGAACAAGAATTGGACAGGTGACCCATGCGCTCCAAAGACACTGGCTTGGGATGGGTTAACCTGCAGCTATGCCATTTCAACCCCTCCAAGAATCACAGGAGTAAATATGTCGTATGCCGGTTTAAGTGGCGATATATCATCTTATTTCGCCAATCTAAAAGAAATCAAGAAGTTGGACTTGTCACACAATAACTTGACAGGATCAATTCCTAATGTCATTTCACAGCTACAATTTCTCGCGGTTCTAGATTTGACAGGAAACCAGCTTAATGGATCAATTCCTTCTAGTCTTCTGAAAAGAAGTCAAGATGGCTCCTTGACCCTAAGGTACGGCAATAATCCAAACCTTTGCAGTAACAGCAGTTCATGCCAGCTCCCACAAAAGAAGAGCAACTCTATGCTTGCCGTCTATGTTGCTGTTCCAGTAGTGGTGATAGGAGCAGTTGCAGTGTTCCTGATTCTCTTCATCAGGAAGAAGAAGAACAAATCAAAGGGTGCTGTGAAGCCACAGATTTTGGGGAATGGCGTGCAGTCACACAGTCAGAATGGCAGTGGAGGGAGCCTGCTGGAACTGCACAACCGTCAGTTCACGTACAAGGACTTGGCAGTCATAACGAACAACTTCCAGCGAGTCCTTGGCAAAGGAGGGTTTGGCCCCGTCTACGACGGCTTCTTGAAGGATGGTACTCATGTGGCAGTTAAACTACGGGATGAGTCTTCCAGCCAAGGATATAGTGAGTTCCTGACAGAGGCTCAGACTTTAACGAAAATTCATCACAAGAATCTTGTTGCATTAATCGGTTACTGCAAAGATGAGATACATTTGGCACTTGTGTACGAGCACATGTCAGAAGGAACTCTGGAAGATAAGCTTAGAGGCAAAGATCACAAAGGTAGATCTTTAACATGGAGGGAAAGGCTCCGTATCGTATTAGAATCTGCCCAAGGACTAGAGTATCTACACAAGGCATGCAGCCCACGCTTCGTGCATAGGGATGTGAAGTCATCGAACATCTTGCTGAATGCAAATCTTGAGGCCAAGGTTGCCGATTTTGGCCTGACAACGGCTTTTAAATGCGACGGTGACACACATGTATCCACAGTCAGGGTGGTTGGCACATATGGCTACCTTGCACCCGAGTATGCCACAGCCCTACAAGTTTCGGAGAAGATTGACGTATACAGCTTCGGTGTGGTGTTGCTAGAGGTGATCACAGGACAGCCGCCCATTATAAAGCTCCCGGAACCTACTACTATCATCCAATGGACCCGGCAACGCCTAGCGCGAGGCAACATCGAGGGTGTGGTGGATGTAAACATGCCAGACGACCGCTACGACATCAACTGTATCTGGAAGGTAGCAGATGTGGCTCTGAAATGCACTGCACATGCTCCTGGGCAGCGACCCACAATGACTGACGTGGTGACACAGCTAAAAGAGTGTCTAGAGCTTGAGGAAACCAGCTTTAAAGGCGACACGAGTAGCAGTTATATGTCAGGGAGCAGCATAGACCCAAACTCGAGTTATAACACATATACCACTGAGATGAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MAARWWLLLLLGLAVAGVVRGQGGAPDTSGFISIDCGLPEKTSYVDDATKLKFTSDDAFTDAGTIHNVSSEFATPKTTTDRSLYNVRSFPAGARNCYTVPSVVPGSKYLVRAKFLYGNYDGLNKPPVFDLHLGVNFWQTVTVPSADWLGNAEVIAVVPDDFLQVCLVNTGAGTPFISGLDLRPLPSSLYAPANATQGLVLLDRRNFGASGSTVIRYPDDTYDRVWWPWSNPPAEWSDISTADKVQNTIAPVFDVPSVVMQTAITTRNSSIPIQFSWDTKPNHVYPDPGSIFTLYVTELELLAGNAVRQFNVTINGVIWTKAPYKPVYLSTDAMYNGDRPYRGITRYNFSLNAAGSSTLPPILNAAEAFSVISTADLATDAQDVSAITAIKAKYQVNKNWTGDPCAPKTLAWDGLTCSYAISTPPRITGVNMSYAGLSGDISSYFANLKEIKKLDLSHNNLTGSIPNVISQLQFLAVLDLTGNQLNGSIPSSLLKRSQDGSLTLRYGNNPNLCSNSSSCQLPQKKSNSMLAVYVAVPVVVIGAVAVFLILFIRKKKNKSKGAVKPQILGNGVQSHSQNGSGGSLLELHNRQFTYKDLAVITNNFQRVLGKGGFGPVYDGFLKDGTHVAVKLRDESSSQGYSEFLTEAQTLTKIHHKNLVALIGYCKDEIHLALVYEHMSEGTLEDKLRGKDHKGRSLTWRERLRIVLESAQGLEYLHKACSPRFVHRDVKSSNILLNANLEAKVADFGLTTAFKCDGDTHVSTVRVVGTYGYLAPEYATALQVSEKIDVYSFGVVLLEVITGQPPIIKLPEPTTIIQWTRQRLARGNIEGVVDVNMPDDRYDINCIWKVADVALKCTAHAPGQRPTMTDVVTQLKECLELEETSFKGDTSSSYMSGSSIDPNSSYNTYTTEMS</aaseq>

Gene Sequence

<dnaseqindica>1..88#171..945#1083..1366#1556..1694#1779..1850#1933..2004#2182..2262#2350..2510#2618..2880#3118..3244#3431..3499#3611..3803#3903..4317#ATGGCGGCTCGGTGGTGGCTGCTGCTGCTGCTCGGCCTCGCCGTCGCCGGCGTCGTTCGCGGCCAGGGCGGCGCGCCTGACACGTCCGGTGAGCTTTAAACTTCGATCGCCAACTCGCCGGCATTTTGGACTCGTGTACATGCTGTTCATGCATCGGGAGTACCGCGCAGGCTTCATCAGCATAGACTGCGGCTTGCCGGAGAAGACCAGCTACGTGGACGACGCCACGAAGCTGAAGTTCACCTCCGACGACGCCTTCACCGACGCCGGCACAATCCACAACGTCTCGTCGGAGTTCGCCACGCCGAAGACGACCACGGACAGGAGCCTGTACAACGTGCGCAGCTTCCCCGCCGGCGCGCGCAACTGCTACACGGTCCCGTCCGTCGTGCCGGGGTCCAAGTACCTGGTCCGTGCCAAGTTCTTGTACGGCAACTACGACGGCCTCAACAAGCCGCCGGTGTTCGACCTCCACCTCGGGGTCAACTTCTGGCAGACGGTGACCGTGCCATCCGCCGACTGGCTGGGGAACGCCGAGGTCATCGCCGTCGTGCCGGATGATTTCTTGCAGGTCTGCCTTGTGAACACCGGCGCCGGGACGCCGTTCATCTCCGGCCTGGACCTGAGGCCCCTGCCGAGCTCGCTCTACGCGCCCGCCAACGCGACGCAGGGGTTGGTCCTGCTCGACCGGAGGAACTTCGGCGCGAGCGGGAGCACCGTGATCAGGTACCCCGACGACACGTACGACCGCGTGTGGTGGCCGTGGAGCAACCCGCCGGCGGAGTGGTCGGACATCTCCACGGCGGACAAGGTCCAGAACACGATCGCCCCCGTGTTCGACGTGCCGTCCGTCGTGATGCAGACGGCCATCACGACGCGCAACTCCTCCATTCCCATCCAGTTCTCCTGGGACACCAAACCCAATCACGTCTACCCTGATCCCGGGTACAAGTCAATCACTTCTTAAATTTGTCCCAAACTTCACGGCCTAATGAGCAATTAACGACAATTTTTTTTTCAAATTTCAATTGTAATTGCATGCTGAATTCGTAATTAACCCTTGGGTGTCTCTACAAATATAGGTCGATTTTTACCTTGTATGTCACCGAGCTGGAGCTCCTGGCCGGCAATGCCGTTCGCCAGTTCAACGTCACCATCAATGGCGTGATTTGGACCAAAGCCCCATACAAGCCGGTTTATCTGTCCACCGACGCCATGTACAACGGAGATCGACCCTACCGGGGCATCACCCGGTACAACTTCTCTTTGAACGCCGCGGGAAGCTCCACGCTGCCGCCGATACTCAACGCCGCGGAGGCTTTCTCCGTCATCTCCACAGCCGACCTTGCAACAGACGCTCAGGATGGTAAATATTTTTCTTTGTGCGTGATGATCTGATAATTGCGCCTCTTTGTGCTGTGTTACTGAACAAAGATAATGCATGCAGTTTCTGCCATCGGTTGATTGGTACATTTAGTTGTCTTTATTTGTGATTTGTGAATGATCTGATAACTGTGCTCCACTGCTCCTTTGCACTGTCACTGAAACAATGCAGTTTCTGCCATCACTGCAATCAAGGCCAAGTATCAGGTGAACAAGAATTGGACAGGTGACCCATGCGCTCCAAAGACACTGGCTTGGGATGGGTTAACCTGCAGCTATGCCATTTCAACCCCTCCAAGAATCACAGGAGTGTAAGTTTCATTTCAGTTTCTGCACAAACGCAAACAATGCTATTTCAAAAACTCTGCTTTCTAAACCATTGTGCATTTCTACAGAAATATGTCGTATGCCGGTTTAAGTGGCGATATATCATCTTATTTCGCCAATCTAAAAGAAATCAAGAAGTTGTAAGTAAGAAGTTTTTAATCCATTTTTACAATGATTTTGGAGTTAAATTTGCACTTTACATGCGCCTATATTTTATTTCAGGGACTTGTCACACAATAACTTGACAGGATCAATTCCTAATGTCATTTCACAGCTACAATTTCTCGCGGTTCTGTAAGCAGTCCGATCCATGTTGACATCTTTCTCTAATAATTTAGTCATACAATTTTATTGCCATAAGTCATAATCACCACTCTAAAATCTCGATGTTCTGTAAGTTCATAAATTTTGAGTAAGCATGTGCCTGTGAAAATCAAATATTGACTTCAACGTTATGTATATGTGATCCAGAGATTTGACAGGAAACCAGCTTAATGGATCAATTCCTTCTAGTCTTCTGAAAAGAAGTCAAGATGGCTCCTTGACCCTAAGGTTTTTCCAATATTTCTTTTGCACTTGATCAAAATTGTTAAACCATCATTCAAAAAACAAATGTTCACCATCTCTTCTTTTTGATAGGTACGGCAATAATCCAAACCTTTGCAGTAACAGCAGTTCATGCCAGCTCCCACAAAAGAAGAGCAACTCTATGCTTGCCGTCTATGTTGCTGTTCCAGTAGTGGTGATAGGAGCAGTTGCAGTGTTCCTGATTCTCTTCATCAGGAAGAAGAAGAACAAATGTGAGCTTTGGCATTAAAGCGCATCAATAATCAAGTAGTACTAATCAACTTCCTACATGTAAATGCAATTAACAGTCGATAATACTGGTTTCATTTTGCCTGGACAGCAAAGGGTGCTGTGAAGCCACAGATTTTGGGGAATGGCGTGCAGTCACACAGTCAGAATGGCAGTGGAGGGAGCCTGCTGGAACTGCACAACCGTCAGTTCACGTACAAGGACTTGGCAGTCATAACGAACAACTTCCAGCGAGTCCTTGGCAAAGGAGGGTTTGGCCCCGTCTACGACGGCTTCTTGAAGGATGGTACTCATGTGGCAGTTAAACTACGGGATGAGTCTTCCAGCCAAGGATATAGTGAGTTCCTGACAGAGGTAATGCTTGATCAAGAATAGTATATATATACAGCTTTTAAATGATCTAGTGATGATGACAGTGAATATGTTATCCCACTAATGCTTTTTACAATTGGCATATTATATATTCTGATACTATGGAATAGTTCAAACATGTGAATACAGAAATTCATAGCAAAGCATCAGCATTTTGCAAGTGAATGATGAAAACTTTCTTCCGACTCTAGAAGGTGATCTTTTTTTTTCCTTGTTCAGGCTCAGACTTTAACGAAAATTCATCACAAGAATCTTGTTGCATTAATCGGTTACTGCAAAGATGAGATACATTTGGCACTTGTGTACGAGCACATGTCAGAAGGAACTCTGGAAGATAAGCTTAGAGGTTTGCTAAGTATTTCATTTGTATATTCTTTTTAACTAAGGAAAGAGACTAAGTCATAGCCTTTGCACAATAAAAGGTACAGAAAACCATTTTTCATAAACAATTAAAACACATATTCCCGAATTTCAATATGAATGATATTTTCTCTTTGGAAGAAAAATACATTTACGATCTTCTGATCGACAGGCAAAGATCACAAAGGTAGATCTTTAACATGGAGGGAAAGGCTCCGTATCGTATTAGAATCTGCCCAAGGTACACATTCTAGCACAATAGTTCTATGTTAGTATTATTGTATATGGATCATACTGATATTGAAAAATAACAAGAATACCCTTTTTCCCTTTGCAAAAATGTTGCTCACAGGACTAGAGTATCTACACAAGGCATGCAGCCCACGCTTCGTGCATAGGGATGTGAAGTCATCGAACATCTTGCTGAATGCAAATCTTGAGGCCAAGGTTGCCGATTTTGGCCTGACAACGGCTTTTAAATGCGACGGTGACACACATGTATCCACAGTCAGGGTGGTTGGCACATATGGCTACCTTGCACCCGAGTATGTTGATCTTACTATGCATATTACCACGTTCTAGTTGCCTTGATGATTATTGACCAAATGGTACACTTCATAGTGATATGTTTTGTCATGGCACAGGTATGCCACAGCCCTACAAGTTTCGGAGAAGATTGACGTATACAGCTTCGGTGTGGTGTTGCTAGAGGTGATCACAGGACAGCCGCCCATTATAAAGCTCCCGGAACCTACTACTATCATCCAATGGACCCGGCAACGCCTAGCGCGAGGCAACATCGAGGGTGTGGTGGATGTAAACATGCCAGACGACCGCTACGACATCAACTGTATCTGGAAGGTAGCAGATGTGGCTCTGAAATGCACTGCACATGCTCCTGGGCAGCGACCCACAATGACTGACGTGGTGACACAGCTAAAAGAGTGTCTAGAGCTTGAGGAAACCAGCTTTAAAGGCGACACGAGTAGCAGTTATATGTCAGGGAGCAGCATAGACCCAAACTCGAGTTATAACACATATACCACTGAGATGAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020225

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020225&oldid=48981"