BGIOSGA020227

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Revision as of 03:05, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020227| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020227, complete gene.| tag = OsI_206...")
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Gene Name

BGIOSGA020227

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020227, complete gene.

LocusTag

OsI_20687

Ensembl Transcript ID

BGIOSGA020227-TA

Ensembl Protein ID

BGIOSGA020227-PA

Length

2635

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27542460..27545094

Sequence Coding Region

27542460..27542587,27542709..27542780,27542869..27542940,27543026..27543106,27543581..27543773
,27543848..27543974,27544309..27544501,27544614..27545094

Genome Context

<gbrowseImage1> name=IndicaChromosome05:27542460..27545094 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:27542460..27545094 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTATCAAGGTAAAGTATCAGGTGAAGAAGAACTGGATGGGTGATCCGTGTGTTCCGAAGACACTTGCTTGGGATAGCTTGACCTGCAGCTATTCCACTTCCATCCGTCCAAGAATCACTAGCCTAAATCTGTCCTCAAGTGATCTAAGGGGTGATATATCGTCTTCCTTCGCGAATCTCAAGGGAGTCCAATACTTGAATTTGTCAAACAACAATTTGACAGGCTCAATTCCAGATGCCCTTTCACAATTACCTCTATTGTCAGTCTTAGATTTGGCAGGAAACCAGCTCAGTGGATCAATTCCATCTGGACTTCTCAAAAGAATTCAAGATGGCTCCCTAGATCTAAGTTCATCACTACAGCTTGAGAACCGTCGGTTCACATACCAGGAACTAGAGATGATGACAGACAACTTCCAGCTAGAGCTTGGAAGGGGAGGGTTTGGGTGTGTCTATGATGGGTTTTTGGAGGATCACACTCGAGTGGCAGTCAAGTTGATGTTTAAAAACTCTAAGCAAGGAGACAAGGAGTTCCTTGGAGAGGCACAGATTTTAACCCGGATTCATCACAAGAATCTTGTTTCCATGATTGGATACTGCAAGGATGGGGATAACATGGCACTTGTTTATGAGTACATGTCAGAAGGAACTCTACAAGAACACATTGCAGGGCTAGAGTATCTACACAAAGGTTGCAATCCACCTCTCATCCATAGGGATGTGAAGGCAACCAACATTCTATTGAATGCGATGTTGGAGGCGAAGATTGCTGATTTCGGTTTGTCCAAGGCTTTTAATCGCAACAATGACACTCATGTTTCCACAAACACACTTGCTGGCACACCTGGATACGTTGATCCAGAGTACTTAATGACAATGCAACCCACAACCAAGAGTGATGTTTATAGCTTCGGTGTTGTGTTGTTGGAGTTGGTCACAGGGAAGCCAGCCCTACTACGGGACCTAGATAACACTAGCATTATCCAATGGGTACAGCAGCACCTGGCACGAGGCAACATCGAGGATGTGGTGGATGCACGCATGCATGGAGACCATGACATTAACAGTGTGTGGAAGGTTGTGGACATCGCACTCAAGTGCACCATGCAGGAGTCTATACATCGACCCACAATGACTGGCGTGGTGGCAATGTTGCAAGAGTGCATTGAACTTGAAAATAGACATCTGAAAGACTACGCGGCCAATAGTGAAAACCACAACTCAAGTTATAATACATACGGTGTTGACCAATCCACTAATGTGATCCAGAGTAATGATGCTTTTGAAGTTGGGCATAACATTGCAAGGGTCCCAACAATGGCCACTGGTCCTGTTGCACGATGA</cdnaseq>

Protein Sequence

<aaseq>MAIKVKYQVKKNWMGDPCVPKTLAWDSLTCSYSTSIRPRITSLNLSSSDLRGDISSSFANLKGVQYLNLSNNNLTGSIPDALSQLPLLSVLDLAGNQLSGSIPSGLLKRIQDGSLDLSSSLQLENRRFTYQELEMMTDNFQLELGRGGFGCVYDGFLEDHTRVAVKLMFKNSKQGDKEFLGEAQILTRIHHKNLVSMIGYCKDGDNMALVYEYMSEGTLQEHIAGLEYLHKGCNPPLIHRDVKATNILLNAMLEAKIADFGLSKAFNRNNDTHVSTNTLAGTPGYVDPEYLMTMQPTTKSDVYSFGVVLLELVTGKPALLRDLDNTSIIQWVQQHLARGNIEDVVDARMHGDHDINSVWKVVDIALKCTMQESIHRPTMTGVVAMLQECIELENRHLKDYAANSENHNSSYNTYGVDQSTNVIQSNDAFEVGHNIARVPTMATGPVAR</aaseq>

Gene Sequence

<dnaseqindica>1..128#250..321#410..481#567..647#1122..1314#1389..1515#1850..2042#2155..2635#ATGGCTATCAAGGTAAAGTATCAGGTGAAGAAGAACTGGATGGGTGATCCGTGTGTTCCGAAGACACTTGCTTGGGATAGCTTGACCTGCAGCTATTCCACTTCCATCCGTCCAAGAATCACTAGCCTGTAAGTAGTTCACATCTATATAGACTTGTCTTCACCACAAAGATAAATGAGAAAAAAATAAAGCAGAATGCACTGATTAAATGTACAATGAAATTGATATAGATATATTTGCTCCATGCAGAAATCTGTCCTCAAGTGATCTAAGGGGTGATATATCGTCTTCCTTCGCGAATCTCAAGGGAGTCCAATACTTGTATGTTCTAAGCTCTTTATAAGCTTTTTTTGGAGGGGATTTCTGTCATAAATATATATGGGGGAAAAACTGGGTCCATGTTTTGCAGGAATTTGTCAAACAACAATTTGACAGGCTCAATTCCAGATGCCCTTTCACAATTACCTCTATTGTCAGTCTTGTAAGTAAAACATCAAGATTTGCCTAATTCCAATTTTTATAGCTCCTTTTGTTGTCTCGTACTAATACTATATGATTTTGTTTAGAGATTTGGCAGGAAACCAGCTCAGTGGATCAATTCCATCTGGACTTCTCAAAAGAATTCAAGATGGCTCCCTAGATCTAAGGTCAGCACAACCCGTCTCCCAATAATTAACACACCAACCACGACAAAAACATAGTGCAAATATTTATCTTATCTTTGAGCTTCTTTGAGGTCCTTGGGAAGTACTAAGATGCACTTAAAAACTCTTCATTTTTTGGTAGAGACGGAAATAATCCAAACTTATGCACCAATGGCAATTCATGCAAGCTTGTGAAAAGGAACAACAAGTTAGTGATCTACATAGTTGTTCCCATAGTTCTGGTTATGGTGATAGTACCAATATATCTAATACTCTTTTACCTGAGAAGAAAAAGGCTAGGTGAGGCTTTCTACAAATACATCACTCATGTGGTTTATTAATAGCTAAGCATATCCACAAACAAAACTAACCCATTTCATATGCATCCTTTGCATATCAAGGACCAAGGAGCAATTCCACAGAACCACAAAATGAGAAGGAAGAGTATGCTTCGAAAAATCGTGGCCACATGCATAGTTCATCACTACAGCTTGAGAACCGTCGGTTCACATACCAGGAACTAGAGATGATGACAGACAACTTCCAGCTAGAGCTTGGAAGGGGAGGGTTTGGGTGTGTCTATGATGGGTTTTTGGAGGATCACACTCGAGTGGCAGTCAAGTTGATGTTTAAAAACTCTAAGCAAGGAGACAAGGAGTTCCTTGGAGAGGTATATGTTGTTCTCTTTTGACTAATTGTTGATCTTTCTAGAGTGAAAATTGAAAGTTGCAACCGATCACTTAGGCACAGATTTTAACCCGGATTCATCACAAGAATCTTGTTTCCATGATTGGATACTGCAAGGATGGGGATAACATGGCACTTGTTTATGAGTACATGTCAGAAGGAACTCTACAAGAACACATTGCAGGTACCTAAAATATTTAGATTCTACGTGCATGGTATGGTACAACAGCTCCAAAATTGACCCAAAAAAAGAATGATAATGATAATGATAAGCCATTGATATTTTACTTTTATTTATCTCTAGATCATTTGAAATGCTTTTGGTTGATATGATACACTTCATTTACTTTGCCTGCAATAGAAGAAAACAGCAGGAGAAGATTCTTACCCTGGAGACGGCGGCTCCAGATCGCTCTAGAATCTGCTCAAGGCAAGTAATGCTAAACCTAATGCTGCTATTGCTTTTCTTGGAGACTTGATTTTGCTAAAAAAGTGAATATTGACATCGTGATGTGTAGGGCTAGAGTATCTACACAAAGGTTGCAATCCACCTCTCATCCATAGGGATGTGAAGGCAACCAACATTCTATTGAATGCGATGTTGGAGGCGAAGATTGCTGATTTCGGTTTGTCCAAGGCTTTTAATCGCAACAATGACACTCATGTTTCCACAAACACACTTGCTGGCACACCTGGATACGTTGATCCAGAGTTCGTAATCCCATCTACCTTATTTAATTTGGTCTTCCAAATACCACTTATAGTTTTTCTATTGTTTTTCTAGTGCAAGTACTAATATGCATTACATTGGCTAAACATGTAGGTACTTAATGACAATGCAACCCACAACCAAGAGTGATGTTTATAGCTTCGGTGTTGTGTTGTTGGAGTTGGTCACAGGGAAGCCAGCCCTACTACGGGACCTAGATAACACTAGCATTATCCAATGGGTACAGCAGCACCTGGCACGAGGCAACATCGAGGATGTGGTGGATGCACGCATGCATGGAGACCATGACATTAACAGTGTGTGGAAGGTTGTGGACATCGCACTCAAGTGCACCATGCAGGAGTCTATACATCGACCCACAATGACTGGCGTGGTGGCAATGTTGCAAGAGTGCATTGAACTTGAAAATAGACATCTGAAAGACTACGCGGCCAATAGTGAAAACCACAACTCAAGTTATAATACATACGGTGTTGACCAATCCACTAATGTGATCCAGAGTAATGATGCTTTTGAAGTTGGGCATAACATTGCAAGGGTCCCAACAATGGCCACTGGTCCTGTTGCACGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020227