BGIOSGA020259

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Revision as of 03:06, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020259| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020259, complete gene.| tag = OJ1014_...")
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Gene Name

BGIOSGA020259

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020259, complete gene.

LocusTag

OJ1014_C08.11

Ensembl Transcript ID

BGIOSGA020259-TA

Ensembl Protein ID

BGIOSGA020259-PA

Length

3459

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27958521..27961979

Sequence Coding Region

27958521..27958892,27960479..27960600,27960719..27960914,27961337..27961454,27961564..27961611
,27961689..27961789,27961872..27961979

Genome Context

<gbrowseImage1> name=IndicaChromosome05:27958521..27961979 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:27958521..27961979 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGCGAGCGAGACGAGCCAGAAGGCGGCGGCGGCGGGGAGCAGCATCCCGGAGGGGGCGCGGCGGCTGCTGCACGAGCTGGCGGCGGGGTGGGGCGACGTGGCGGACTGCCGGGCGCTGGAGGTGGTGCCGCTCAGGGGGGCCATGACCAACGAGGTCTACCAGGCGCGGTGGCCGCCGGCGGCGGAGGCGGAGGTGGAGGCGGCGGGGAGGAGGGTGCTGGTGAGGGTGTACGGCGAGGGCGTGGAGGTGTTCTTCGACCGGGAGGCCGAGGTGCGCACGTTCGAGTCCATGTCGCGGCACGGCCACGGCCCGCGCCTCCTCGGCCGCTTCCCCAACGGCCGCGTCGAGGAGTTCATCCACGCCAGGACACTCTCAGCTGTTGATCTGCGTGATCCAGAGATTTCAGCCATTATAGCCTCAAAGCTGAGGGAATTCCACAACCTTGATATGCCTGGTCCAAAATCTGTACTCATTTGGGACAGACTAAGGAACTGGCTCAAAACTGCCAAGAATTTGTGCCCCTCTGACGAAGCCAAAGAGTTCTGCTTGGATAGCATGGAGAACGAGATCACTGCGTTGGAAAATGAGCTTTCAGAGGATTACCAGTGCGTAGGATTTTGCCACAACGATCTCCAGTATGGAAACATCATGATTGATGAAGAGACCAAATTGCTGACCATCATTGACTATGAGTATGCAAGTTTTGGTCCAGTTGCTTATGACATTGCAAACCATTTCTGCGAGATGGCTGCAGACTACCATTCAGAAAAGCCTCACATACTGGACTACACTAAATATCCAGATACTGATGAGCAGAAGCAATTTGTGCAGAGCTACCTGAGCTCTTCAGGCGAGGAACCTGACGCAGAGAAGGTCAATAATCTGATAAAAAGTATCGAGAAGTACACCTTGGCAAGCCATCTCATTTGGGGCCTCTGGGGAATAATTTCGGAGCATGTCAACGATATTGACTTCGACTACATGGGGTATGCGAGGCAGAGGTTCGAGCAGTACTGGCTCAAGAAGCCTGCAATCCTAACATGTCAGGTCGTTGAATAA</cdnaseq>

Protein Sequence

<aaseq>MVASETSQKAAAAGSSIPEGARRLLHELAAGWGDVADCRALEVVPLRGAMTNEVYQARWPPAAEAEVEAAGRRVLVRVYGEGVEVFFDREAEVRTFESMSRHGHGPRLLGRFPNGRVEEFIHARTLSAVDLRDPEISAIIASKLREFHNLDMPGPKSVLIWDRLRNWLKTAKNLCPSDEAKEFCLDSMENEITALENELSEDYQCVGFCHNDLQYGNIMIDEETKLLTIIDYEYASFGPVAYDIANHFCEMAADYHSEKPHILDYTKYPDTDEQKQFVQSYLSSSGEEPDAEKVNNLIKSIEKYTLASHLIWGLWGIISEHVNDIDFDYMGYARQRFEQYWLKKPAILTCQVVE</aaseq>

Gene Sequence

<dnaseqindica>1..372#1959..2080#2199..2394#2817..2934#3044..3091#3169..3269#3352..3459#ATGGTGGCGAGCGAGACGAGCCAGAAGGCGGCGGCGGCGGGGAGCAGCATCCCGGAGGGGGCGCGGCGGCTGCTGCACGAGCTGGCGGCGGGGTGGGGCGACGTGGCGGACTGCCGGGCGCTGGAGGTGGTGCCGCTCAGGGGGGCCATGACCAACGAGGTCTACCAGGCGCGGTGGCCGCCGGCGGCGGAGGCGGAGGTGGAGGCGGCGGGGAGGAGGGTGCTGGTGAGGGTGTACGGCGAGGGCGTGGAGGTGTTCTTCGACCGGGAGGCCGAGGTGCGCACGTTCGAGTCCATGTCGCGGCACGGCCACGGCCCGCGCCTCCTCGGCCGCTTCCCCAACGGCCGCGTCGAGGAGTTCATCCACGCCAGGGTGAGCATTTTTTTTTTTGGCCTTCTCTGTTTTTTTTTTCTTCTTCTTCTTTCTTGTCTGCTTGCGACAAAATTTCTTGCTGCTCTTGATTTCGTACTTGGAAGGTAGTGTTCTTCAGTTATTCGTATTGAGTTTGGAACTTTGGATGGGTGACTGGGGAATCTGACGCATAAATTTTGTTTGCGAATTCAGAGCTTTTTTATTTTTCGGCGAGAAATTCATAGTTGTTTCACTGTTTGCAATCGTTTTCAGCCTGCATCGTGGGAATCGTGTAGTAGGTAGCGTCATATGAATATTAATCAGTTGCCTTTCTTTGAAAATTTCCTCTTGATGATGTAGTAGATGTACTCTGCAGTTGTACTGTCGAAATTTCAACATTGACCTTCAGAAACTTATCCGGGATGTTCATTCAAATCCGTACTCAATGAAGTCATCACCCAATTTTAATTGTGGCAGCCATTGTTTTTGTTCTCTTGTTGACTACACTGTGCCTGCCTAATATTATATCTAAAAATTAAAACAAAAAACTTTTCTTAATAGCTTCCGAGAGACTGAGATACTCTATCCGTCTCAAAATATAAATGATTTTGAATGGATTGGACACATTATAGTATTACGAATCAGACCAGAGAGCCTGATGAGTATTACTTTTGGCAGAAAGCATATAAATTACTTGTCCTAGTAACTTGTAAGCATGGGAGGGTGTTGTCATTAGTTGACATTTCTGTTTCTTGGGCCCTGAAAAGAAAGACATTTCTGCTTCTTGGAGATGACTAATAGCTGTACTATTTTGTTTTGTTAGGACATATGAAACTGTTCTCTTGCTGAATAAATTGTACAACATGAATCCTTTTCTTTTTCCTTCATAACTTCTTGACGGCTTTAGTGATAGCTTCTGAGCCTGGCAGAATGCTGTCATTAGTTAGCAATTATGCTTGCTGAAGATGTCATACAGTTCAGCTACTATGTTTAATGATGGTTGTCTATGAAATTGTTTTATGGTTTATCATATTTAATTGCTTATAGTTCAACGATCCAAATATCCACATGAAAGAACAAGTGTGTGTATTGTATAACGTATCTACCGTTCTACCTGCTTACTGAAACGAATCTACCTCGCTGAACACAGCAGTGAATAAAAAAAAGAGAAGACATAGTTAATTTTGGTGAGCACAGCCATAAGGAATCAATTTGGTGTCTGAACACCTCAATGATCACTGGTTTAATCATGCAAGAAATCTTTTGATTAGTAAGACTGATGACCGAGTTGCTAAAGGTCACAGAACACGGCGTCTGAGCTTCAGAATAAGGCATCAGCCCGATTACTTTATTAATATAATATATAGGGGGAAAATATGGCATGGACAAAACAAAGTAGGATGGGAATGTTAATCTTTTTTCTCAATTTGTTTCTTCACTTTCAAAAGAAAGCATCATGTTCTGTTTGTGTTGCTGGGAAGAACCGAAGAAGGACGATTCAAAAACACAAAGCATTACGATATGATGACTATAAATATGTTTATATAGGATGGTGGGTCCATTAATGTTCAAAAGAACAAAAGGACTGATGCAAATATTCCTTTCAGACACTCTCAGCTGTTGATCTGCGTGATCCAGAGATTTCAGCCATTATAGCCTCAAAGCTGAGGGAATTCCACAACCTTGATATGCCTGGTCCAAAATCTGTACTCATTTGGGACAGACTAAGGTATTACTTAATTTGTGTTTACACTGTTTTTTAGCATTGCATACTTGTAAAATGAAACACATCATCGAAGTAAAACACTAAGTTACTAACTGACAATGCCTATGCACATCTTCATCAGGAACTGGCTCAAAACTGCCAAGAATTTGTGCCCCTCTGACGAAGCCAAAGAGTTCTGCTTGGATAGCATGGAGAACGAGATCACTGCGTTGGAAAATGAGCTTTCAGAGGATTACCAGTGCGTAGGATTTTGCCACAACGATCTCCAGTATGGAAACATCATGATTGATGAAGAGACCAAATTGCTGACCATCATTGTAAGTTCTTGCTCCATTGTGTATGTTTGATTCATCTGTTCCATTACTATTTTTTTGGGGGAACGAGCAAGAGACTTGGACATCTTTATATTAAGAAGAAAGCTCAATTTCGTCTAGAGTCATCAGACCGACCACAAGGAAAAAGGAGAGTTAAACCATCTGCTTTGTTATTTCACATCACACACATTGATGCGTCTTGGTACTCCGTATAACCTTATCATACATTGAGTTGTATGTTACTATCTCCAGGAATAAAGATTTCACTTCTGAAACGACATACTTTATGAAAGATTATGCATATTTTCCTTATTAGCCTTCATGTATGTCATGTCTGTTTCTGAACCTGAAGTTTTATATGTAGCCAGGCGAAATTAACAAACATATCGTCTTGATCTTACTGGTTCCTCATCATGCCTACACAGGACTATGAGTATGCAAGTTTTGGTCCAGTTGCTTATGACATTGCAAACCATTTCTGCGAGATGGCTGCAGACTACCATTCAGAAAAGCCTCACATACTGGACTACACTAAATATCCAGGTATTGCATATTAGCTGTCAAAGTTATTAATTTGTACATTATTGTTCTCCCTTTTATCCATTTTGGTCACCCTATATTTTCTCTGTTCGTTCTTGCTTATCTGCAACAGATACTGATGAGCAGAAGCAATTTGTGCAGAGCTACCTGAGCTCTTCAGGTAAGCATGAAGTTTGTCATTAACATCTCATCTCCCTTCTCTATTCCATAAAAACAATAACCGAATATCCATAATAGGCGAGGAACCTGACGCAGAGAAGGTCAATAATCTGATAAAAAGTATCGAGAAGTACACCTTGGCAAGCCATCTCATTTGGGGCCTCTGGGGAATAATTTCGGTTTGGTTTCTCCTCAGTTTCACTTGCCTCCAACTGTGTAAGACTGAACACCATGTAAACATCCAATTTACATCTTTTGCAGGAGCATGTCAACGATATTGACTTCGACTACATGGGGTATGCGAGGCAGAGGTTCGAGCAGTACTGGCTCAAGAAGCCTGCAATCCTAACATGTCAGGTCGTTGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020259