BGIOSGA020260

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Revision as of 03:06, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020260| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020260, complete gene.| tag = OJ1741_...")
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Gene Name

BGIOSGA020260

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020260, complete gene.

LocusTag

OJ1741_B01.4

Ensembl Transcript ID

BGIOSGA020260-TA

Ensembl Protein ID

BGIOSGA020260-PA

Length

4096

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27968361..27972456

Sequence Coding Region

27968361..27968467,27968800..27968946,27969212..27969256,27969356..27969525,27969760..27969845
,27969934..27970041,27970664..27970793,27970898..27970997,27971084..27971215
,27971495..27971539,27971623..27971792,27971915..27972000,27972099..27972206
,27972316..27972456

Genome Context

<gbrowseImage1> name=IndicaChromosome05:27968361..27972456 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:27968361..27972456 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCAACAGCGAGTACGAGTACGTGAAGAGGGAGTTCGAGCTCGACAGCCTCCTCCCGCCCTCTAATTGGATCGTTGTGCGCATCGACGGCTGCCACTTCCACCGCATTCTCTTTGTTAGATTCTCCAAGATACATACCTTTGAGAAACCAAATGATGAGCGTGCTTTAAGATTGATGAACGCCTGTGCCACTTCTATGCTTGAAAAGTTCCCAGACATAGTCTTCGCATATGGCGTCAGTGATGAGTACAGTTTTGTTTTTAGAGAGGAAACTGAATTCTATCAAAGACGAGAAAGTAAAATTCTATCTTTATGTGTTTCCTACTTCACTTCTGTGTACGTGATGAAGTGGAAAGATTTCTTTCCTAATAAGGAGTTGAAGGAGCCTCCATATTTTGATGGTCGAGTTGTATGCTATCCAAACTTGAAGACTATCCGTGATTACCTGGCCTGGAGACAAGTGGATTGTCATATAAACAATCAATATAACACCTGCTTCTGGTCGTTAGTGAAGTCTGGGAAAACTGAAAAAGAAGCTCAACAAGCATTGAAGGGGACATTTTCAAAGGACAAGAATGAGTTACTTTCACAACAGTTCCAAATCAATTATGATGATGAACCGGCTATATTCCGAAAAGGGTCTTGCGTTTACCGAGACAAGGTAGAAACAATGGTGAAGACTGATCGTTGTGGAAACCCCATAAAAAGGACACGCTTAGTTATTACAAATGCAAATGTCGATATCATAGGACCCGAGTTTTGGGAAAATCATCCATATATTCTTCGAGAAGAAAAATGTAGGTATGAGAATGTTATGAAGTTTGACATCAACCATAGGCTTCCACCTTGTAATTGGACTGTCGTTCGCATCGACATTTGTAAATTTGAGCAATTCTCGTTGATCCATTCATTTGACAAGCCAAATGATGAGGCAGCTCTAAGGTTGATGAATGCTTCTGCTTCTTTGATGATGGAGTCATTCCCTGACATTGTCTTTGGCTATGGTTTTAGCAATGAGTACAGTTTTGTGTTCCAGGATAAGACTGAACTATACCAGCGTCAGGAAAGCTTAATCCTTTCATCATGTACCTCACGTTTCACGTTGTTTTACATGATGAAGTGGAAAGATTTTTTCCCCAACAAGGACTTAGTGGAGCCACCGCACTTTGAGGCAGAACTTCTATGTTACCCAAAACAAAAGATACTTTGTGATTATTTGTCATCGAGACAAGCAGAATGCCACACCACCAACCAATACAGCACATGCTTTTGGATGCTAGTGAAATCTGGCAAAAGTGAAAACGAAGCTCGTGAGATATTAAAGGGAACATTATCAAAGGACAAGAACGAGTTGCTTTTCCAGCAATTTCATTTGAATTACAACAATGAACCAGCTGTGTTTCGGAAGGGTTCATGTACTTACCGGCAAAAGGTGGAAGAATCTGCAGACGCAGAGGGTAGAGAAAATACCACAAGAGAACGGTGGGATGTGATTGTGGCACACGCAGACATGGGGACGGAATTTTGGAGAAAGCATCCTTATATTTTAAGAAAATTGGATTTACTAGGCTGA</cdnaseq>

Protein Sequence

<aaseq>MANSEYEYVKREFELDSLLPPSNWIVVRIDGCHFHRILFVRFSKIHTFEKPNDERALRLMNACATSMLEKFPDIVFAYGVSDEYSFVFREETEFYQRRESKILSLCVSYFTSVYVMKWKDFFPNKELKEPPYFDGRVVCYPNLKTIRDYLAWRQVDCHINNQYNTCFWSLVKSGKTEKEAQQALKGTFSKDKNELLSQQFQINYDDEPAIFRKGSCVYRDKVETMVKTDRCGNPIKRTRLVITNANVDIIGPEFWENHPYILREEKCRYENVMKFDINHRLPPCNWTVVRIDICKFEQFSLIHSFDKPNDEAALRLMNASASLMMESFPDIVFGYGFSNEYSFVFQDKTELYQRQESLILSSCTSRFTLFYMMKWKDFFPNKDLVEPPHFEAELLCYPKQKILCDYLSSRQAECHTTNQYSTCFWMLVKSGKSENEAREILKGTLSKDKNELLFQQFHLNYNNEPAVFRKGSCTYRQKVEESADAEGRENTTRERWDVIVAHADMGTEFWRKHPYILRKLDLLG</aaseq>

Gene Sequence

<dnaseqindica>1..107#440..586#852..896#996..1165#1400..1485#1574..1681#2304..2433#2538..2637#2724..2855#3135..3179#3263..3432#3555..3640#3739..3846#3956..4096#ATGGCCAACAGCGAGTACGAGTACGTGAAGAGGGAGTTCGAGCTCGACAGCCTCCTCCCGCCCTCTAATTGGATCGTTGTGCGCATCGACGGCTGCCACTTCCACCGGTACAGTTGCTCTCACCTTCCATCCGGTGGCTGTATCAGTTCATTCTCTGTTGGTAGTGCAGTGTGCGATAGTTTATGCAGTCATGGCAATTTCAGTTTAAATCTCCTGCTTTTTGCTTGATGCAACATGTCTGTTTGGTCTTAGACTCTTAGGGATAAAAAAAAGAAGCTAAACCTGCTATTATGCACAACGCCTTCTGCTTGGTTTTCTTTGTGATGATCGGTTTATATGAGAAGCAGGCCACAGTGTGTGTGGATACTAGACAGGGGAAATCACTGTTGCTTACAATTTGGAATAGTTGATCTGTGTTTGTCCTGTCCACTAATTTCAGCATTCTCTTTGTTAGATTCTCCAAGATACATACCTTTGAGAAACCAAATGATGAGCGTGCTTTAAGATTGATGAACGCCTGTGCCACTTCTATGCTTGAAAAGTTCCCAGACATAGTCTTCGCATATGGCGTCAGTGATGAGTACAGGTACAACATCTTCTCTTGGAATTTTCAGTTTGAATTTTTCCAGAGTCCTTAGTTTGTTCTTTCTCCAAAGGTAAATGAGAAACACTACACTTGATTGCCATGGTTAATGTTATCATTATGTAAGAGCTGTGCTGTTATATTACATGTGCAAAATGCCTCTTGAGTAGGTGATCAAAGACGTGAACTGTAGATACTCCCTGTTGACATAGAATGCATTGTCTTCAGTATAATTATAAGTTATTTCCATCTCATGTTTGTGTTGCAGTTTTGTTTTTAGAGAGGAAACTGAATTCTATCAAAGACGAGAAAGGTACCATTTAATATGTACACCATTTTCACTGAGTATCTTGAATGTGCTTATGTGCAATGTTTTATGACATTGGCTTTTCTACTAATAACTTGCATGCAGTAAAATTCTATCTTTATGTGTTTCCTACTTCACTTCTGTGTACGTGATGAAGTGGAAAGATTTCTTTCCTAATAAGGAGTTGAAGGAGCCTCCATATTTTGATGGTCGAGTTGTATGCTATCCAAACTTGAAGACTATCCGTGATTACCTGGCCTGGAGACAAGTGGATTGTAAGATATTCTCTCCACCAACTTTTTCTTGTATAGCAAAACAGATTCAATATTCATATTTTTGCATTGTGCAATGATGTTCTGTACAATGAAACCGTTTTGTATATCATCTTTACCTAATACGGAATCAGCTTAGCACCACTAAATATTTGTCTATGTGTTAGGAGATTTGTACAACTTATTTCTTCATTAAACAGATCGACTCAGAACAAATTCCTTTGTTGTGTTTTTTAGGTCATATAAACAATCAATATAACACCTGCTTCTGGTCGTTAGTGAAGTCTGGGAAAACTGAAAAAGAAGCTCAACAAGCATTGAAGGTAATCAAAATGTTTTAGAGAGTTTATATATGCTTCCAATTGCATTTTAATAAATGATTGTTTTCTTTTTGTTTCCTCTTCTTTCTAGGGGACATTTTCAAAGGACAAGAATGAGTTACTTTCACAACAGTTCCAAATCAATTATGATGATGAACCGGCTATATTCCGAAAAGGGTCTTGCGTTTACCGAGACAAGGTAATGCTGCCAAGAAAGCAAAACGGCATCATTATTAATAGCTTTGATAATACTCAACAAAGTATTTACATAGTCTCTACTCTCTAGTAATGCCCATGGTAGTTTTTTTCCATACTTGCCATCAGAGATATTTCAAAGAAGATTTGGGACCTTGTAGTGAGACTTATTTGCTAGTTCTCTTGGTAGGAACTTGGCGAGATTTGCAGTTTTCAGTTGTTTGGTCATGCGTAATTATATGGAAGTGGAATGGCAAAAAAAAAAAAAAGAGGGGGGGGGGACAGATTAAAACTTGTCTGGATTTTGTAAAAAAGGTACTTGTCTTATAGTGATAATCAGAGCACCCTTTATGCAATCCGGTGCCAGTTCTTTTTAAGTTATTGATCAAAGATTATGATTCTTATAACATGATTGTAAACTGCATACTACCTTTCTTTTATGGGTTTGATTGTGGAACAATCGTAGTTCTTGGAAAATTTTATCTTCATCCTTTTTCCTTTTTGTGAACTATTATTCTCATCCCTTTGCTGAGATTGACTAACCAGGAATGAAATAACATGCTTTCTGAAATGTTAATAGTTGTTAAATGCACTTTTGTATGCTAAGAGCTTTTGTATCACTGTAGGTAGAAACAATGGTGAAGACTGATCGTTGTGGAAACCCCATAAAAAGGACACGCTTAGTTATTACAAATGCAAATGTCGATATCATAGGACCCGAGTTTTGGGAAAATCATCCATATATTCTTCGAGAAGGTGAGTTGAGTTAACTCCTGTTCTATATATGCTTTCAGCAATTCAGCTGCAGTCAGAACTCTGAAAATGTACAGCATCAATCTAACTGGAGTCTTTGGTTAAAGAAAAATGTAGGTATGAGAATGTTATGAAGTTTGACATCAACCATAGGCTTCCACCTTGTAATTGGACTGTCGTTCGCATCGACATTTGTAAATTTGAGCAGTTAGGACCCTCTTGTTTCTTCTTTATTTGAAAGCATGATGCAATCTCTTTTGTGTCTTGTTGAGAACTCAAATTTTCTTTGTTAGATTCTCGTTGATCCATTCATTTGACAAGCCAAATGATGAGGCAGCTCTAAGGTTGATGAATGCTTCTGCTTCTTTGATGATGGAGTCATTCCCTGACATTGTCTTTGGCTATGGTTTTAGCAATGAGTACAGGTAAGATATACCTCCTTATGACCTTATCCACTGTCTTAGAGCAAAAACAATTGAAAGAAAGAAAAACCTTTGCTTGTACAGAAAAAGAAGTCCTGGATGTCATGAACTGAATTGATTTTGTTTTAATTTAGTCTTCGCAAGATAAAAATATTATGACTAATAATCTATACATTAAATTGTATAGCAAAGGTTTCATCTTAGACAAATATTTTTATATTTGATGGACAGAAAATTCATCTTTTGCAAATGTTCTTTCTTATTTTCTTCTTGTTGTCGCAGTTTTGTGTTCCAGGATAAGACTGAACTATACCAGCGTCAGGAAAGGTAATTACTGATTTTATGCATTTCTATTATGCCTGTCCTTTCAAGAGGTGCCATTGACAAAATGATTGCACCTTCTTTTGCAGCTTAATCCTTTCATCATGTACCTCACGTTTCACGTTGTTTTACATGATGAAGTGGAAAGATTTTTTCCCCAACAAGGACTTAGTGGAGCCACCGCACTTTGAGGCAGAACTTCTATGTTACCCAAAACAAAAGATACTTTGTGATTATTTGTCATCGAGACAAGCAGAATGTAAGTTATTCCTCCTAAAAGGCATATATTCTGACACTGTTAAATGATTCTCTTCAGTGAACTTCAGTATGTATTCGTTTGTTCATCTTCAGTGAACTCACGTGCTACGTACTATTTCGCAGGCCACACCACCAACCAATACAGCACATGCTTTTGGATGCTAGTGAAATCTGGCAAAAGTGAAAACGAAGCTCGTGAGATATTAAAGGTCTTCTTTCATCATTTCGGTTTAAATATTTCCCCCCTCTTGATCTTGTTTGATGCTTTGGTTATCTGTAGCCATAACTCTCTTACTGCTCTCTGCAGGGAACATTATCAAAGGACAAGAACGAGTTGCTTTTCCAGCAATTTCATTTGAATTACAACAATGAACCAGCTGTGTTTCGGAAGGGTTCATGTACTTACCGGCAAAAGGTAATCTTTGTTGTTCCCAAGAAGCATTTTGCCTGACTTCTTGTATTATTTCCGCTGCCTGCTTTGTTTTCCACAAGAATCTTAACTCGTACGTTTCAAATGGCTGCAGGTGGAAGAATCTGCAGACGCAGAGGGTAGAGAAAATACCACAAGAGAACGGTGGGATGTGATTGTGGCACACGCAGACATGGGGACGGAATTTTGGAGAAAGCATCCTTATATTTTAAGAAAATTGGATTTACTAGGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020260

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020260&oldid=49016"