BGIOSGA020262

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Revision as of 03:06, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020262| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020262, complete gene.| tag = OsI_207...")
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Gene Name

BGIOSGA020262

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020262, complete gene.

LocusTag

OsI_20773

Ensembl Transcript ID

BGIOSGA020262-TA

Ensembl Protein ID

BGIOSGA020262-PA

Length

5627

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27993147..27998773

Sequence Coding Region

27993147..27993236,27993379..27993663,27993806..27993957,27994126..27994216,27994455..27994511
,27994678..27995734,27998088..27998773

Genome Context

<gbrowseImage1> name=IndicaChromosome05:27993147..27998773 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:27993147..27998773 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAAGTCTCCGGCGAAGTGGATCAAATCCGTGCTCTTCGGGAAGAAGTCATCGAGGTCCGGCTCTACCAAGGCGAAAGATTTATCGAAGGGCTCGAACAACAAAGGGTATGCTGCTGCTGGGAAGGATGCTGGGTTTGAGAGCTCCCCGGTGATATCGGAGCCGGTGCTCGTTACACCTCATAACAATGAGGCTGTCCAGGAGGTTGGGAGGGGTGAGAATTCCAGCTTACAAGGTGAAGTGGTGGTGCGCGATGTCAGTCAAGACCTGGAGAAGCAGAATACTGTCGTTTCCGATGCGTCCAACGACCCCGAGAGGTTGAGAGAGGAACAAGCGGCCGTCAAGGCACAAGCTGCCTTCCGAGGCTATCTGCATGGTATTGGTCCAGGCACGTCGGGCATTCCGTGCGTTGAAAGGAATCATAAGACTCCAAGCCCTGATTCGTGGGCATCTCGTAAGGAGGCAAGCCGTTGCAACTCTTCGTGCAACATGGTTGATTGTGAAGTTTCAAGCTCTAGTCCGTGGCTTACAAGGCCGCATACAAGGAACATGTGCCCCAACCTTTTAGCACTTAAGCCACATAAGCAGCCAATTATGCTGTATAAGAGCTACAAGAGTGGTAAGCGGGATGCATGGAAGGAGAAATTGTCTTCAAATGCATTTGCTCGTAAGCTTTTAGCTTCACCAATTCTGGTAGAGGCTCTCCATTTTCAATATGATGAGAGGGATCCAAATTCAGCCTTCAACTGGTTGGAGAGATGGACCATAGGTCGTGTCTGGAGGCCCATTTCACATCCAAAGAGAGCTGCTGTTACTGATGCCAAGCCACACACAAGGAAGGCCAGTTATGCAATGGAAACAGAGTCAGGGAAGTTGAAGCGCAATTCTCGGAGAAGTTCTGCTGCACCAGTTGAGTCCTCTCAGACGAACATGGCCATGGAAACTGAAAAATCAAGGCGAAACCCAAGGAAATTCACTAGCTCTACTGCTGATTCAGTGCCCGAAAGTCAGTTAACTGAACTTGAGAAGGTCAAACGTAACCTTAGGAAGGTAACTAATTCTATGGCTGAGGCTTCAAAGGTATCTACTCCTGCAACTGAGATCCCTGAACGCCAAGAGGTCCAATGTGAGAAACCACAGCGAACTGCAGAAGAAGTTCCAAATTATCCTGAGATCCAAGAACCTCAGAATGGTAATCTGTTGGAAAATGCTAAGACGGATATCCTGGTACCTGATCTTCAACCTGAACCGGAGGTTCCTTCTTATCAAGTTGAAACTGAAGAAAAAGTTGCTGAACTGACTGTTGCTGATCCTGCGGTAGAAACTATGCCGCTGCAAGATATCCACAATGAAGAAAATGCTTTAGTAAATGATATGGAACAGAGATCCAAAGAAGAACCTCTTTCTACTGAGAGCCTTAAAAGCAGCAAGAGGAGGTCTTCATTCTCAACCAAGACAGAGTATCCAGAAAATGGTTCAAAGAATTCGCCTGCTGTTCCCAGCTACATGGCTGCAACACAATCTGCGAAGGCGAAACTGCGGGGACAGAATTTACCCAGACTTAGTTCTGACTCTGCGGAGAAAAATGGCTTCACCAGGCGCCATTCCCTCCCATCCTCTAATGGTAAGTTGAACTCGCACTCGCCGCGTACACAAAGGCCAACCCATGCTGGTGGCAAAGAGGGAGTGAAGGCTGACAAGTCTATGCTATCATCAAGAGACGCAAGTGAGGTCTCCACCGCACGATTGAGTACTGCCGCGAAGACTACTCTCCATTCACGCGCGGAGACTTCGCTCCTCCTCCTCCTCGGCGTCCTCGCTCGCTCCTCTGGTACTGCCGCCACGCCGCTGCATCCTCGCCGAAGCCGCCTTCTTCTCCGTCCGCCGCCGGAGCCGAGGTCCCCTTCCGCCGCTGCCGGATCCTACCATCCGTCGCGGCCGGCGCTCCTCCTCCTCGCTCGCTCGCTCGCTCCGGATTACTGCCGCCGCGCCGCCGCATCCTCGCCGGAGCCGAGGTCCCCTTCTGCCGCCGCCGGATCCTACCATCTGCCGCGGCCAGCGCCGAGGGAGGCCCCATCCGCCGCCGCCGCCACCATCATCGCCGCCTCATTCCCACTTCGCGTTGTGCCTCCCTCCGCTGCTACCGCATCGGCTCCTGTCGCTGCTTCCGCCGCTCCCGTCTTCGCCGACGCAGTCAGTGCCTCCCTCTACCGCCGCCTGGGCCCCCGCCTCCGTGCCGTCCGGGAGCAGGAGTTTCGGCGGGGTCGTGCGGTCGCCGTCGCGCCGCCACAGATCGAGACTCGCTGTCGCCCCGCCGCAAATGCCTCTGGATCTCGCCTCCGCTCCCACCACAGCCACGTGATCTTCTCTCCCACCGGCCTTCCACTAGCTGCCTGCACCTCCTCGGTCGGGTAG</cdnaseq>

Protein Sequence

<aaseq>MGKSPAKWIKSVLFGKKSSRSGSTKAKDLSKGSNNKGYAAAGKDAGFESSPVISEPVLVTPHNNEAVQEVGRGENSSLQGEVVVRDVSQDLEKQNTVVSDASNDPERLREEQAAVKAQAAFRGYLHGIGPGTSGIPCVERNHKTPSPDSWASRKEASRCNSSCNMVDCEVSSSSPWLTRPHTRNMCPNLLALKPHKQPIMLYKSYKSGKRDAWKEKLSSNAFARKLLASPILVEALHFQYDERDPNSAFNWLERWTIGRVWRPISHPKRAAVTDAKPHTRKASYAMETESGKLKRNSRRSSAAPVESSQTNMAMETEKSRRNPRKFTSSTADSVPESQLTELEKVKRNLRKVTNSMAEASKVSTPATEIPERQEVQCEKPQRTAEEVPNYPEIQEPQNGNLLENAKTDILVPDLQPEPEVPSYQVETEEKVAELTVADPAVETMPLQDIHNEENALVNDMEQRSKEEPLSTESLKSSKRRSSFSTKTEYPENGSKNSPAVPSYMAATQSAKAKLRGQNLPRLSSDSAEKNGFTRRHSLPSSNGKLNSHSPRTQRPTHAGGKEGVKADKSMLSSRDASEVSTARLSTAAKTTLHSRAETSLLLLLGVLARSSGTAATPLHPRRSRLLLRPPPEPRSPSAAAGSYHPSRPALLLLARSLAPDYCRRAAASSPEPRSPSAAAGSYHLPRPAPREAPSAAAATIIAASFPLRVVPPSAATASAPVAASAAPVFADAVSASLYRRLGPRLRAVREQEFRRGRAVAVAPPQIETRCRPAANASGSRLRSHHSHVIFSPTGLPLAACTSSVG</aaseq>

Gene Sequence

<dnaseqindica>1..90#233..517#660..811#980..1070#1309..1365#1532..2588#4942..5627#ATGGGGAAGTCTCCGGCGAAGTGGATCAAATCCGTGCTCTTCGGGAAGAAGTCATCGAGGTCCGGCTCTACCAAGGCGAAAGATTTATCGGTATGTTTTACACCTCTTTGTTTGCGCGGCAAATACTGTTGTTGCAACCGATTTCTTGATGATTATGGAGTCCAGTTATGGAATTGTAGTTAGATAGAAGGGATCTGTTGTTGTAACCAAATTTATTACTTTCCATACGCAGAAGGGCTCGAACAACAAAGGGTATGCTGCTGCTGGGAAGGATGCTGGGTTTGAGAGCTCCCCGGTGATATCGGAGCCGGTGCTCGTTACACCTCATAACAATGAGGCTGTCCAGGAGGTTGGGAGGGGTGAGAATTCCAGCTTACAAGGTGAAGTGGTGGTGCGCGATGTCAGTCAAGACCTGGAGAAGCAGAATACTGTCGTTTCCGATGCGTCCAACGACCCCGAGAGGTTGAGAGAGGAACAAGCGGCCGTCAAGGCACAAGCTGCCTTCCGAGGCTATCTGGTAATGTTTCTTTTTTCTGATTCCTGTTTGATCCTGCATGCCTTTTATAAAATTTCCTTGCGTCGTGTAGTTCTGCAATCCACTAAAGAACCCGACAATACCTTGTAAAGTTCTTCTTTAGAATTATGCATCCTAAATTTAGCATGGTATTGGTCCAGGCACGTCGGGCATTCCGTGCGTTGAAAGGAATCATAAGACTCCAAGCCCTGATTCGTGGGCATCTCGTAAGGAGGCAAGCCGTTGCAACTCTTCGTGCAACATGGTTGATTGTGAAGTTTCAAGCTCTAGTCCGTGGTAGGAATGTCAGACTTTCTACTAATACCATTCAAGTCAACTGGAAGCTTGCTTCAACAACAGTCGGGGGTAAATTTCTTGCTGATCCTGTTTCATTCAGTACCCTGATGTATTCATCATAATGGTGCCCCTTTCCTTTTAATCTGTTTCACTGTTATATAAAAAAAGGCTTACAAGGCCGCATACAAGGAACATGTGCCCCAACCTTTTAGCACTTAAGCCACATAAGCAGCCAATTATGCTGTATAAGAGCTACAAGGTGGGGTCACCGCACTAAACCGCTTACCACTTTTTAAAACATTGCAAGTCTATCATCAAAATGCTCCTGGTTCAACATAAGCAAGTAATAGCACTACAATCATGCTAAATAGAACATTGCTACACATATTTTTGCATGCTTGCATTCATCGCTTTTAGTTTGTTTGGGAAGCTTTGTTAAAACTGACAGATTCGCCTGGCAAGATATGCTAGTTATATGATTCTTTCCCCTTTCGCAGAGTGGTAAGCGGGATGCATGGAAGGAGAAATTGTCTTCAAATGCATTTGCTCGTAAGGTATACTAAATTTAGTCTTCTAATGGCTTGATACAAATATGAGAATCTTGAATCTATGCATTAGCCTGTTATACTCATTACTCACAGGCATATATCACTCTTTTGTTTCCTGTATGTATATGTTTTCTTCTTTTGTGCTAATTGTTTTTTTCTATAAATGCTGTAGCTTTTAGCTTCACCAATTCTGGTAGAGGCTCTCCATTTTCAATATGATGAGAGGGATCCAAATTCAGCCTTCAACTGGTTGGAGAGATGGACCATAGGTCGTGTCTGGAGGCCCATTTCACATCCAAAGAGAGCTGCTGTTACTGATGCCAAGCCACACACAAGGAAGGCCAGTTATGCAATGGAAACAGAGTCAGGGAAGTTGAAGCGCAATTCTCGGAGAAGTTCTGCTGCACCAGTTGAGTCCTCTCAGACGAACATGGCCATGGAAACTGAAAAATCAAGGCGAAACCCAAGGAAATTCACTAGCTCTACTGCTGATTCAGTGCCCGAAAGTCAGTTAACTGAACTTGAGAAGGTCAAACGTAACCTTAGGAAGGTAACTAATTCTATGGCTGAGGCTTCAAAGGTATCTACTCCTGCAACTGAGATCCCTGAACGCCAAGAGGTCCAATGTGAGAAACCACAGCGAACTGCAGAAGAAGTTCCAAATTATCCTGAGATCCAAGAACCTCAGAATGGTAATCTGTTGGAAAATGCTAAGACGGATATCCTGGTACCTGATCTTCAACCTGAACCGGAGGTTCCTTCTTATCAAGTTGAAACTGAAGAAAAAGTTGCTGAACTGACTGTTGCTGATCCTGCGGTAGAAACTATGCCGCTGCAAGATATCCACAATGAAGAAAATGCTTTAGTAAATGATATGGAACAGAGATCCAAAGAAGAACCTCTTTCTACTGAGAGCCTTAAAAGCAGCAAGAGGAGGTCTTCATTCTCAACCAAGACAGAGTATCCAGAAAATGGTTCAAAGAATTCGCCTGCTGTTCCCAGCTACATGGCTGCAACACAATCTGCGAAGGCGAAACTGCGGGGACAGAATTTACCCAGACTTAGTTCTGACTCTGCGGAGAAAAATGGCTTCACCAGGCGCCATTCCCTCCCATCCTCTAATGGTAAGTTGAACTCGCACTCGCCGCGTACACAAAGGCCAACCCATGCTGGTGGCAAAGAGGGAGTGAAGGCTGACAAGTCTATGCTATCATCAAGAGACGCAAGTGGTAAGTTGTAAACAATATATCTGAATATTCATTGTTTGCATTAGTATCTGTATTGTGCCTAACATTATCATGCATTTAACTTTACCTTCCAGTATACGCAGAATGCATTTGGATATTAAGAGGAATTTGAATAATCTAGAAGAAAGTTGATAGAATAAACCAATTTCCTGTTTTATGCATAATATCTTCCTATCACCCTCATTTTGCTTTACATAATGAAAATGAAACATCCATTTCTTCATTATTTCACATAGGTGGGCGCTGGGACACCATCTATCCCTTTTGTTATCTAGATTTGTTGTGATGTACATGAGCTTAGCTTGATTGTTAAGAGCATATCAGTCCTAAAATATTCACCGAAATCTGTAGATATAGTGAGCCTTCAGTCAATGTCACCTGAGATCCAAATGTTTAGAATGTAAAGGAACAGATATATGACTTCACAATAATAGCTATCCTTGTGACTTAACAATATTCCTGTTGAATTTAGTGACCTCAATTCTTAGTTTGTTTTGCTGATTGGAAAGCTTGATGTTTCCCATGTTCTTAAACATTTTTAAATTTCATACTTGTGGGCTCAAGAAAACCTGCCTGTTTTGTTTATCACATTTATGCGATGTATGTTTGAGATGTTCTTTTCACATACCAAGTAGTAGCATTGCATAGCCATTGTCACAATTTCTCAGGCCACTTATTTTTTAAAAAACTACAGAAAGACCTGCCAAAGCTGAATGGAAACGCTGAAGAGTTCATCGATCGAGCACCAAATCCTCCTGTTGGGTTGCGCAACATTCGGGTGGATGACGACGATGATGGCGTCTGCAGTTTGATCCAATTGTTTTGCTTCCGATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTTTGTATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTTCCTCTGCCATGTTCATGTATAGCTGAAGCGTTTCCGGTTTGCTTTTGATTTCCCTGCCTCCCCGAGACACCCTGCTTTTGTTGAGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTTATCCCATTTGGACATCTCTTCTGCGTTTTCTTCTTATAACTGACTAGCGAGTTGTGCCATTCCATGACACCCTGTTTGTTTACTGCTTTTCTTGGCCTCCTTTTCATGTCGAGCGCTCCAGTTGTTTTGCCTGCACTGTGAATGTGAGATGGATGTCATGTTCCTGAATCCTGTGAAAATTATGTACTACCTTCGTCTCAAAATATAACAATCTACAATCTAGGATCATATTAGACATATTCTAGTACTATGAATCTGTACAAGAATTTTGTTCAGATTAATATAACTATATGAAATGTTTAATTCAATTTTAGATTGCTATATTTTTAAGATGGAGGAAGTAGAATTCTAAGAAATCTCAGCAAAATTCCGGCCTTGTGTTCAAAAGGGCCAAAATATAGTAACAATCTAGAATTGGATTAGACACATCTTAGTTCCATGAATTTGCACAAGAATTGCACGGGATATTTGTTCAGATTTGTATAACTTTAATTCGATTTTAGATTGTTACTACATTTTGAGATAGGAGTAAAATTCTACAAAATCTCTAGAAAATTCCGGCATTGTGTTCAAAAGGAGGCCAAGGATTCAAGGCGAAATCGAGTCCCGCATAAGACATGTCGGTCACCACCGTCCGTCCCCAGGTCCCGCGACACCGGCGTGTGGCCGCTCGCCGTCTGATGGGCGATTCGACGGCGAGGTAAGCCATCGTCAGGTCACGGCGGCGGCTGGGCAGCGCTATCGCAAGCCCAAGGATGGCATGCCATGGGCTCGTCACGCAAGCAAAATTCCTCATTTCTCAATGACGGCCTGGTTGCGGCCCCGCTCGATTACGAAAAGTTTGTAGAAATTTTTAAAACCAAACTTTTCAACTTGCACGGTAAGTTGGGAATAAAAATCGTCGCTGTTCAGACGTTGACTCTCGTTGTTTTTATAGTTTTTGTATGGATGCTCTCGTGTCGTGTGTCTCGCCATAGTGCATGATGACCTTAATTTGATTCCCAGAACATAAAATAAAAGGGAAATATAAAATGTGCTGATACCATTATTGATCATCATGTATAAAGTTTTTTGGTAGTATGACTAGTTTGCGATCAATTAACCAAATATGCCAGATTATGTGATCAATTATTACCTTGCTTACTCCTAATATCTATACTAATACTAATACTAATCTATACTAATATAAAAAAGGAGGAGTTGCCTCCCTCTAATCTTATAGGTGAAATCATCCGGATTAATCTGTACCGTCCATCCGCGCGCAAGAGGTCTCCACCGCACGATTGAGTACTGCCGCGAAGACTACTCTCCATTCACGCGCGGAGACTTCGCTCCTCCTCCTCCTCGGCGTCCTCGCTCGCTCCTCTGGTACTGCCGCCACGCCGCTGCATCCTCGCCGAAGCCGCCTTCTTCTCCGTCCGCCGCCGGAGCCGAGGTCCCCTTCCGCCGCTGCCGGATCCTACCATCCGTCGCGGCCGGCGCTCCTCCTCCTCGCTCGCTCGCTCGCTCCGGATTACTGCCGCCGCGCCGCCGCATCCTCGCCGGAGCCGAGGTCCCCTTCTGCCGCCGCCGGATCCTACCATCTGCCGCGGCCAGCGCCGAGGGAGGCCCCATCCGCCGCCGCCGCCACCATCATCGCCGCCTCATTCCCACTTCGCGTTGTGCCTCCCTCCGCTGCTACCGCATCGGCTCCTGTCGCTGCTTCCGCCGCTCCCGTCTTCGCCGACGCAGTCAGTGCCTCCCTCTACCGCCGCCTGGGCCCCCGCCTCCGTGCCGTCCGGGAGCAGGAGTTTCGGCGGGGTCGTGCGGTCGCCGTCGCGCCGCCACAGATCGAGACTCGCTGTCGCCCCGCCGCAAATGCCTCTGGATCTCGCCTCCGCTCCCACCACAGCCACGTGATCTTCTCTCCCACCGGCCTTCCACTAGCTGCCTGCACCTCCTCGGTCGGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020262