Os12g0106000

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Revision as of 10:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0106000| Description = Similar to Ferritin 1, chloroplast precursor (EC 1.16.3.1) (ZmFer1)| Version = NM_001072468.1 GI:115486897 GeneID:435...")
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Gene Name

Os12g0106000

Description

Similar to Ferritin 1, chloroplast precursor (EC 1.16.3.1) (ZmFer1)

Version

NM_001072468.1 GI:115486897 GeneID:4351264

Length

3429 bp

Definition

Oryza sativa Japonica Group Os12g0106000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:319495..322923

Sequence Coding Region

319871..319914,320021..320084,320198..320263,320397..320458,321211..321298
,321401..321461,321542..321625,322332..322630

Expression

GEO Profiles:Os12g0106000

Genome Context

<gbrowseImage1> name=NC_008405:319495..322923 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:319495..322923 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttcctcctagggttgccccctcctctctggccgccgccgccgccgcggcgcctacctatctcgccgccgcggcctcgacccctgcttccgtctggctgcctgtgccgcgtggagccggagccgtggcagtgtgcagggccgccgggaaagggaaggaggtgctcagcggcgtggtcttccagccattcgaggagctcaagggggagctctccctcgtcccccaggccaaggaccagtctcttgctaggcaaaagttcgtcgacgagtgcgaggccgccatcagcgagcagatcaatgtggagttcaatgcatcgtacgcgtaccactcccttttcgcctactttgaccgtgacaacgttgctctcaagggattcgccaaattcttcaaagaatccagcgatgaggagagggatcacgcagagaaactcatgaagtaccagaacatgcgtggaggcagggtgcggctccagtccatcgtcacacccttgacagagttcgaccatcctgagaaaggggatgccttgtatgctatggagttggccttggctctcgaaaagcttgtaaatgagaagttgcacaacctgcacagtgtggcatcaaggtgcaatgatccacagctgaccgacttcgttgagagtgaattccttgaggagcaggttgaagccatcaagaagatctctgagtatgtcgcccagctgagaagagtgggaaaggggcatggggtgtggcactttgatcagaagctgcttgaggaagaagcttga</cdnaseq>

Protein Sequence

<aaseq>MLPPRVAPSSLAAAAAAAPTYLAAAASTPASVWLPVPRGAGAVA VCRAAGKGKEVLSGVVFQPFEELKGELSLVPQAKDQSLARQKFVDECEAAISEQINVE FNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEERDHAEKLMKYQNMRGGRVRLQSI VTPLTEFDHPEKGDALYAMELALALEKLVNEKLHNLHSVASRCNDPQLTDFVESEFLE EQVEAIKKISEYVAQLRRVGKGHGVWHFDQKLLEEEA</aaseq>

Gene Sequence

<dnaseqindica>3010..3053#2840..2903#2661..2726#2466..2527#1626..1713#1463..1523#1299..1382#294..592#cgggaaggaatagtggttaagcttgaccgactccggtgcggccgggccgggctccacatcaaccaaccacaagcccaaaatatcctctccagccacgagcccgccacgcgctccctcgccttcgtcccatctcgaccgtccacgtgtggcccatccgtgagctccacgcgcctatatctatccctttctatcacctccacccctaccaccgcacaatctcatcactcttcacccgccgcgccgcgaactccggaaccgaacgccacacgcgccttcctctcacttaatccgccatgcttcctcctagggttgccccctcctctctggccgccgccgccgccgcggcgcctacctatctcgccgccgcggcctcgacccctgcttccgtctggctgcctgtgccgcgtggagccggagccgtggcagtgtgcagggccgccgggaaagggaaggaggtgctcagcggcgtggtcttccagccattcgaggagctcaagggggagctctccctcgtcccccaggccaaggaccagtctcttgctaggcaaaagttcgtcgacgagtgcgaggccgccatcagcgagcagatcaagtctgttttcctcctcctcctcactctgccttccatttttgaatttctattcccctttcatgtgcgcatttcttctgcttcttcttttttaaaatttaacaaaaatctctgtgcctcctggtcattttattttctttgttagtgattggatttcgtaaagggttcatttttcatcctataataatttctgctcttgggatgcgtctgttctacagtgctgcagattttcccaaacattttttttacatggaccaacggatacaaaattattttagtccacaataattgatgtaaataggagaaaagacacttgtgcttagctaaatttagaccctgtttagatgggactaaaacctctttagtccgatgtttggacactaattataaatattaaacgcggactattaataaaacccattctataacctgaattaattcgcgagacgaatctattgagtctaattaatccatgattagcctatgtcatgctacagtaaacatgcgctaattatggattaattaggcttaaaaaaatttgtcacgcgaattagctctcatttatgtaattagttttataagtagtctattttcaatactccaaattcatccgatatgaagtccctgttccaaacacccccttagcttgtcatccgtagttatattccgaattggaattcaatcctaaaaaatagttcaatctttgcagtgtggagttcaatgcatcgtacgcgtaccactcccttttcgcctactttgaccgtgacaacgttgctctcaagggattcgccaagtaagccatcaccacccctcattagccatcaccaagtaggaaaattgtcacccatgtatcgataaattctgttccttcagattcttcaaagaatccagcgatgaggagagggatcacgcagagaaactcatgaagtaccaggtaactttacctctgcttcgtttggcacaccaggaaaactgtaggctgtaccactataatcatgcgcccaaatgctaaaactgccatgttcttctttgtcagaacatgcgtggaggcagggtgcggctccagtccatcgtcacacccttgacagagttcgaccatcctgagaaaggggatgccttgtatggtgagttgctttcagcttgtcctattatctcttatgttttttattccatggtatatgtacttgtgcttctgcttacgccttactgtgtgctagtctgagtgtctgttaattattatctatgtgaaaatttaagtggttggatccttaaggttgggaggagccctttttttggcaagaacaggggaacttccttggtgaatgagctcattcgccatccagattcagcaaggatactttcctcttcaaaagttccatgttgaatcctgatgtcaattactctccgttttttaatgtatgacgcggttaactttttgagatacgtttaaccattcgtcttattcaaaaaatatatataattattatttattttattgtgacttaatttatcatcaaatgttctttaagcgtgatttaaatatttttatatttgcaaaaaaaattgaataaggttaaacgttaattaaaaagtcaacggcgtcatacattataaaacgaagggagtaactttcaataaaggctactttgttttgtaaaagctttcttttaaacattttggactgcacagaaaagattctctaaattctaaacgctcctaaaggagaaaacgtcattgtatattttccatcatttcaccttatggcatttgctagtgtctccagaaagtagcatgcactggctgtttgttgctgtacatacctgtacaaactttgtgttcccctatgttttaccctctagcttgcttgtgatttcagctatggagttggccttggctctcgaaaagcttgtaaatgagaagttgcacaacctgcacagtgtaagatattctcctgttatgcagttatgcagtaatgctgaacatggatttagaatgcgttgtataattctcaacactattttgaaaagaaatatatggtgaaacttgaaaatgtgttgccgtgaatcaacaggtggcatcaaggtgcaatgatccacagctgaccgacttcgttgagagtgaattccttgaggagcaggtaaaaaaccttctgcccacttgggtactgaactagctcttgagatgttaatattcaactgctatgctttagtgaattatgttttgctgaaaatatctgccttgctctgaaaggttgaagccatcaagaagatctctgagtatgtcgcccagctgagaagagtgggaaaggggcatggttagtgtgttttgtcagaaaatacttcatttgatgtactaccatctatctatagacctgtggtttgactcatcagttgttgtttgctacgtaatttgtgttgcaggggtgtggcactttgatcagaagctgcttgaggaagaagcttgaatggaggagacggtgtgaagggcagtagtaggtttcgtttcttccatccatgggatcatgcagctaaagaaagaaaataagtcgagtctgtgtattcatcaaattaagcacgcagtagcaatggagtgaatgaaccaaccaatttggtcatgaacttccccctgtgtctaggtcagtagagcttcagaatcatgtgtatgtcgcgcgtcctcgcagaaaaggaacatggcgcggctggctgtagcgatacttgtgatattgtggctatgcatggagtcatggtgatggtgtattttggggagcatttacacgtttgttgctagagagattttgctggcagccagtaaggaacagtatgataatccattgtggtgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0106000, RefSeq:Os12g0106000