BGIOSGA020282

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Revision as of 03:06, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020282| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020282, complete gene.| tag = OJ1362_...")
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Gene Name

BGIOSGA020282

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020282, complete gene.

LocusTag

OJ1362_G11.6

Ensembl Transcript ID

BGIOSGA020282-TA

Ensembl Protein ID

BGIOSGA020282-PA

Length

6477

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28228582..28235058

Sequence Coding Region

28228582..28228695,28228787..28228882,28229208..28229273,28229355..28229414,28229498..28229554
,28229854..28229983,28230504..28230571,28230666..28230758,28230863..28230910
,28231272..28231409,28231866..28231976,28232128..28232223,28233369..28233440
,28234318..28234372,28234468..28234502,28234981..28235058

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28228582..28235058 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28228582..28235058 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCGAAGGACATCCTCGGCCTCCCCAAGACCGCCTTCCCGTCCGTCCAGGAGAAGAAGCCCCGCGCGCCCAAGGAGCCGCAGCGGAAGCCCGATGGCGTCTCGCGCGAGGTGTACGCGCTCACTGGAGGGGTGGGGATGGCTCCACTCATGCCGACCATCGAGGCTTCGCACCTGAAGCGGCGACCAGCTGTTGAGAAGGAGAAGATAGCATGGCAGTGGCTACCTTTCACGTCCTCTGCACGGACTGACAACCTTCAACTTTACCATTGGGTTAGAGTTGTAAATGGTGCTCCACCCACTGGTGACTATCACTTTGCAAAATACAACAAGAAGGCGGATGTTCTCAAATACACCGATGAGGAGTATGAGAAGTATTTAACCGATCCTGCATGGAGCAGGGAGGAAACAGATAAACTATTTGAACTATGTGAACGCTTTGACCTTCGCTTCATAGTAATAGTTGATAGGTTCCCAACTGATCGCAGCATGGAGGATTTGAAGAGCCGTTATTATTCTGTTACTCGTGCTCTTCTGATTGCTAGAGCTCGATCATTTGATGAAGTTGCTGGTAATCCCCTTGTGAAGGAAACATTCAATGCTGCTCATGAGACCGAGAGAAAGCGTGCTTTATCTGCACTTCTCTCCCAGACAAAACAGCAAGAACGAAAGGATGCTGAGATTTTAGCAGAAGCAAAACGCATTATGGAAACTCGTGCTGCTAGCAAACATACTGAGGAAGCGGGAGCACTGGCACACTTTGATAATGTTGATGGTGTATCTCCCTTGAGCAACACACACCCATTGTCAACTGCTACACTTCCAGCTGCAGCAGTGAATAACTCCATACCTGCTTCACTGCGAATGCTTCGAGTGTATTTGAGAACCCAAGCGCTTGATCAAATGGTCCAAGCAGCAAGTGCCTCGGCGGGCCTTAGAGTTATCAAAAGGGTTGACCAGACTTTACAAGACCTCGGGGTGAATTTGAAGCCCAAGGTCCCGACGAAAGCAGTTTGCGTCGAGCATCTTGAACTACGGAATGAGATACTTACACTGCTTAACTTACAGAAGCAGCTGCAAAATAAAGAAGCTGAAGTTTCAGCTAACAGAGAAAATTCCTTTACAGAGGCACCAAGCACACCTAAGCGTGCTAATAGAGATGTTGATAGACCCTTTGTTCCTGATACTGTTGGGTTTGCAGGTGAGAGAGCAGGCAAGCGGGACCACAAGCGGAAGACTACTGGAAGATTTATAGATGCACCTCCCTCACCACCCCAGTCCAAGAGGCCTCGGAAGTTGAAAGCATCTGATTGA</cdnaseq>

Protein Sequence

<aaseq>MDAKDILGLPKTAFPSVQEKKPRAPKEPQRKPDGVSREVYALTGGVGMAPLMPTIEASHLKRRPAVEKEKIAWQWLPFTSSARTDNLQLYHWVRVVNGAPPTGDYHFAKYNKKADVLKYTDEEYEKYLTDPAWSREETDKLFELCERFDLRFIVIVDRFPTDRSMEDLKSRYYSVTRALLIARARSFDEVAGNPLVKETFNAAHETERKRALSALLSQTKQQERKDAEILAEAKRIMETRAASKHTEEAGALAHFDNVDGVSPLSNTHPLSTATLPAAAVNNSIPASLRMLRVYLRTQALDQMVQAASASAGLRVIKRVDQTLQDLGVNLKPKVPTKAVCVEHLELRNEILTLLNLQKQLQNKEAEVSANRENSFTEAPSTPKRANRDVDRPFVPDTVGFAGERAGKRDHKRKTTGRFIDAPPSPPQSKRPRKLKASD</aaseq>

Gene Sequence

<dnaseqindica>1..114#206..301#627..692#774..833#917..973#1273..1402#1923..1990#2085..2177#2282..2329#2691..2828#3285..3395#3547..3642#4788..4859#5737..5791#5887..5921#6400..6477#ATGGACGCGAAGGACATCCTCGGCCTCCCCAAGACCGCCTTCCCGTCCGTCCAGGAGAAGAAGCCCCGCGCGCCCAAGGAGCCGCAGCGGAAGCCCGATGGCGTCTCGCGCGAGGTACGGCGCGGCCTAATCCGCCATCCTCCCGCACACTTCGACCCCGCGTTTCTCGTTGCTGCTGAAGTGCTGATGGTTGTTGATGATCCAGGTGTACGCGCTCACTGGAGGGGTGGGGATGGCTCCACTCATGCCGACCATCGAGGCTTCGCACCTGAAGCGGCGACCAGCTGTTGAGAAGGAGAAGGTGAGCTGATATGTGCTGAAAATTTGATAACTCTAGTAGAAGCACATGAACTGAGCTGAGAGTTTAGCTACTCGTATACTTAATACCTATTAGGAATTAGGCATTAAGTGTAAGGTGCTCATGGGATTAATATGGGACAAATGAAATGATGATTTGATCATGTGCAACTTCTGTTTTGAAATTGGTGGTCAACCCAAATAAGCAGATTGAATCCACCTCACATATTCATGTCCATTGAGTCATATGGGTAATTGCAGCAAGGTGTTTCGTGCTCCCATTTTGATGGAGCTTGTACTAAATCTGACCATTTGAAGTACTTCTGCAGATAGCATGGCAGTGGCTACCTTTCACGTCCTCTGCACGGACTGACAACCTTCAACTTTACCATTGGGTCTGTTTCTCATGAATTTGTAGTATGGCATACATATCTTAGAAAAAAAAAACTCAGAAAGTCACCCTTTTGATCTTTCAGGTTAGAGTTGTAAATGGTGCTCCACCCACTGGTGACTATCACTTTGCAAAATACAACAAGGTAAGAAGTATATTGTGTTGGGTACATCCTTCATATCCTGCATTGATGCTTACTCAGTTTTTGCTTGTTTTTTCCTATTGCAGAAGGCGGATGTTCTCAAATACACCGATGAGGAGTATGAGAAGTATTTAACCGATCCTGTAGGTACTAGTTGCAATAATAAATTTTTATAAATGCTATGTTTGATCTTTTGTTGAAAATCTTATATTGCTAAAAACCTTCTGTGGATATCATTGCGCTCTTGAATACAATTGATAACAATGTTGGGAAGTTCGAAAATTATACATAATTATGTTATCATCTCATCTTTATATGCTTGTTATGTGGCATTTGAGCATTCATTTCGAATAGTTGCAAGCCTTTGTTTGAAAATATTATATTTGCAAACAATTTTATTGAAAGCCCTTCTATAAATAATCAGTTGTTGATTTCATTTCAGGCATGGAGCAGGGAGGAAACAGATAAACTATTTGAACTATGTGAACGCTTTGACCTTCGCTTCATAGTAATAGTTGATAGGTTCCCAACTGATCGCAGCATGGAGGATTTGAAGAGCCGTTATTATTCTGGTACCTTATATCTTGATATAACCTCTATGCTTAGATAGTGTCCACCACAGGAAATTCTCCTTTGTTGTTAATTTTTAATGTTCTACACATGCATTTACTTGGTCAAAAACCAACAAGTGATTTACTGTGGTTATCATATCCATTTATTTTCCCATTCAATATATGAAACAAGAACAGTTAGTAAATTGTCAGCTCCATAACCGTTCCACCGAATTTGTTTTTATCATAACAGCCAGAATATTGCTCACATTACTTATGTATAATGGGGACTTAAGAAAAGGTTACACGCACACAAATTGATATAAGCAATATTCTGGTCATTGTCCCATTATACATCCCCTGCCCTTCTTTTATGAGAACAAGGTGATTGCATGGCTTGTTATTTAGAATAATCAGTTAACTGCTGAAGCTGCCAATTATTATATTTCAAGTTTGGTATAATTCTATGCTCAACAATTCAGTCTGTGCATTACTATTTGCTTTTGTGAATTCTACACCAGTATATTCTTTGTTATTGCAGTTACTCGTGCTCTTCTGATTGCTAGAGCTCGATCATTTGATGAAGTTGCTGGTAATCCCCTTGTGAAGGTACATGTTGATCTAACCTATGAATAATTGAGTAATTGTTTTCTTATTATGTTTGCCCTTGTACTTATTTCTGTCCATATGGGTTTCTTCTCAGGAAACATTCAATGCTGCTCATGAGACCGAGAGAAAGCGTGCTTTATCTGCACTTCTCTCCCAGACAAAACAGCAAGAACGAAAGGATGCTGAGGTGAGAAATTTGTTGATGATAGTATTATGAGCAGCTGACTTGTGCAGTTTATCATTCCTTAGATTCCAATGTTTTATGTCTGATTACAAGTGTTACCTTTTCAGATTTTAGCAGAAGCAAAACGCATTATGGAAACTCGTGCTGCTAGCAAAGTGAGTAATCAGCACATTTAATTCCATACATCTCACCACAAAAGTAATCTCAAGCAAGAATGTTCTGGTGGCAATTTGCATTATATTGCAAATAATGAGTTTTTTTTTAGAATTCCTTCTGTGATGCAAGAGATGTCAAATCATCTAGATATCTATGAGACTCCGATCTGTTCAAGCAAATAGCGCTTAGCCTTTTGGGCTTTCCCAGATGCCTGCTGTCATGCAGGGATGATAGTGTTGTTCACTAATAAACCTTATGAATTTTGATGGTAGTTAGTTTGAAGTGATATAGTCTGCCTGATCTATCTGATCAGTGGTCTGGAATTTACATGTCTCTAAGCGTTTGAGGCTTTGTCTATAGCATACTGAGGAAGCGGGAGCACTGGCACACTTTGATAATGTTGATGGTGTATCTCCCTTGAGCAACACACACCCATTGTCAACTGCTACACTTCCAGCTGCAGCAGTGAATAACTCCATACCTGCTTCACTGCGAATGGTAACTCTGAAACTATGGATTGTTGCTTTCTGTCTCTTATATTGAGCTGCCGATGAGTTAACATTTTGTTTGTTACAGTAGACATTTTGTTCTATTTATTTAAAGCTAACCATATTTTGCCCCATTCTGTGGAAACCACATTGTCCTATCCTTCATCTTACCATGCCATAATGTCACTATTAAACTAAGTGTAAAATTATGTTTCCTGAGCAATTATAGCATGCCCCATTTATTCCTGAAAAACAAAGATAGTGTAAGTTATCTTGCTCATTGCATGGGATGTGGCTGTTATTAGGATTGTGCCGAACTCATCACAAGCAGACCTTATGTTAATTATATTACTAGCGGGCTTGTTCTCATTAACTGTGGATGCCTATGAATCACATGAAAATTGGTATATCACTCTTCACACTGTTCTTTTTAGATGTTTTTTACTCGCTATACATTCTTTTACAGCTTCGAGTGTATTTGAGAACCCAAGCGCTTGATCAAATGGTCCAAGCAGCAAGTGCCTCGGCGGGCCTTAGAGTTATCAAAAGGGTTGACCAGACTTTACAAGACCTCGGGGTTTGTTTCCTAGACATCAATCTGTACTTGATATGCACCGAACTGATGTTGTTCAAGTTCTTTTTGGGTCTAGTAGGTTTGCAGTGCATTTTCTTTTATAATTTAATAACACAATTAGATACATGAAATTGTATGCATTGTTTCTCTGTAGGTGAATTTGAAGCCCAAGGTCCCGACGAAAGCAGTTTGCGTCGAGCATCTTGAACTACGGAATGAGATACTTACACTGCTTAACTTACAGAAGCAGGTACATTTAGGAAGCTTGCGATAACCATGCTGCTCCTGAAGTTAGCATTTCTTAGAGTAGCGATTAGCAACATGCTTTTAATCTACAATTTGCACTTAGGCTTCCATCCCAAATGTATGCACTGTTTTATTGAAGCACCTATTGAAGAATATCATTAAAAGATGGGAAATCGATGATAAATATTGGTTATAGCGATTTACTTTCTTGAGAAAATTAGGTATATACAAAATATCTTCCCTCTTTAGATACCATTGTAATTGAAACAGTTAGGTTCACTTTAATAACTTCACAAATCTCCTCCAAGTACCTTCCCTTGCCTCCTATCACTCCTCCTAACGCATAAACCAACCCCTTCCCCATAAAGAGCAGGCTGACGTAATCCCCAAGCACCTTGACCCACCCTCCCTTCCCACCTGCTTCTCTGCTGAGAGCACACGCCACTGTTGTCCCCAAGGAAGTTCTATCACAAGCAAACACCTTCCTGTTGATAGAGTGCCAGCACTGCTTGGTCATTTTGGCATTCTAGGGATATATGTGGTATTACTAGGAATTAGATGCAAGCATTACAACTTCACTAAGCTTGCACCTCACTTGTAGAGTTCACACGATCACCGTTACAGCGCAGTCATCCAGAAGGACACCATGAGGTGTGTATCGTGGTAGCACGTCCAGATTTCGTCTGATAGGTGCTCTCTCAAATGGTATCGGCAGTGTTGTATTTGTAGATAGTGTCATGCCTCGGCAAATAGGTTCCCCATTAGGCCTTGTTTGGCTTAGCTTGTTGCCATTCAGAGGTCACCGCTTTATCTAAATCTTACTAGTACTATCTTCCAATGCCAATAAAGTGTACCACGAAAGATAAATGGCATATACTCAGATAGTGCTAAGGTGGTGGGTCTTTTGGTAGAGAAACCAAAATTTCCAATAATGTGATGGAATTGAACCAAACCCTTATGGAGAGATGACAAGAGGCAATGGAATGGTATTTTGAGGAAATTTTGAAATTTGGGTGGTATTAAAGCGAACTCATTTATTTCAATGGTGTATATACAAAGAGGGAAAGTTTTTATGGTATATGCCTTATTTGCTCTAATTTCTTTCCTTTCATCTAATACATCATTATCTTTTGCCTTTTGTGTTAACAGCTGCAAAATAAAGAAGCTGAAGTTTCAGCTAACAGAGAAAATTCCTTTACAGAGGCACCAAGCACACCTAAGGTATATTTCTACATAAATGGACCCCCTTCACAGAAGTATGGTAACTAGCTCTTTCTCTAGTATGCTCACTTTGGAATGTTGGAGTGCTTTAACAGCTAACAGAACTAGAAAATCTTAGTGAGATCTTTTTGAATGAATAAAATGTGGGATAGTAAGGAGGGACTTAGCATCTATGACTGATAAAGAAGAAAATTGGCGAGAGAACCTGTCTGAGAGGACTTGAACACAGGCTGGCCCAAGCTCCTGGCAGCTTCATGACCACTGGGCTACAATGCTGTTCTTATAAAATCTTAGTGAATTCTTAACAGGATAGTGCCAAGCAGTGGCAACTGAAGCTCACTTTCAATACATGAAGATTTATGCCTGTGATATTTATATTAATTTAAGGGAAAATCCATAAACACTTCCATAAGTGGACAAAGTATTCACTCGGGGGGTGTTTTGGGACATGGGGGGCAAAGTGAGAAGGCAGGGTTTTTCAAACTTTCCCTTGATTTAAGTAGTTTGCCTAAGAGCCCGTGCATTGCAATGAAAAACAAATTAAGTTTCTAGCTTATTGAATCAATCAATAAACACTTATTTAGTCTAAGTAATACTATGATTTTTCTTATTGAACAAGTAGATAATTTTGAAATTTGGGGGGAGCCAATAGTGAAATGGGGGAGGATTTGTTGAAAGGTGGTGCAATAGTATAGATTGTGGGGCCCAATTTTAGTGGTAGGGGTGGTGTGGGAATAGACACCACCACTACCAACATTTTAACTAGTATAGATATAGAAAACTTTAATCAGAACCAGTTAATATGAGTATATGATTGAAACAAAAAGTTTATTAAACTGTTAGTTGCTCTTTAGCTAATAACATTGTTTGTTTGCAGCGTGCTAATAGAGATGTTGATAGACCCTTTGTTCCTGATACTGTTGGGTTTGCAGGTAATTTGGAAAAATACATTTTGGTTTGCTTTCTTCTTGCCTCTTCAATCTTATCAGGGACTACTTATACTTTTTTTTGTTTCATGTTACCTAAGGTGAGAGAGCAGGCAAGCGGGACCACAAGCGGAAGGTTTGTTCTTTCTCATCCTCTCTGTGATGATGTTCTTAATATAGTTTCATCTTTAATGTGTGTCTGTGGGACATCCTGCTGACCTTCTAAATATCTAGTTTGAGGGGAGACAAAATTGAATTGAGACATAGTTCAACTGCTCTGATTTTCTGAAATCTATCCATTTGTACTTTACCATCCTGATAGGACATGCAGACAGGAACTATATGTTGAATTTACTTATGTGTGGCAATACCATTTAAAACATCAAACAAGATGCTTCAGTGTGTTGGATCATCCAGTATCAAAATGAAGTGCAATCTCTATTGTTAATGGCCATTTTGGTTGAAGTTGACAGTCATATTCTTGCTGTCCTAAAATGGTTGCATTCTGGAATGCTCCATATTTTAGAATTCAATCAGGGACTTGTTTTCTTCTATAAAACTATATGATTACTTTTACTTGGTTTTATCATTTACATTTGTAACATTTTCGCCAGACTACTGGAAGATTTATAGATGCACCTCCCTCACCACCCCAGTCCAAGAGGCCTCGGAAGTTGAAAGCATCTGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020282