BGIOSGA020287

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Revision as of 03:06, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020287| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020287, complete gene.| tag = OJ1362_...")
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Gene Name

BGIOSGA020287

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020287, complete gene.

LocusTag

OJ1362_G11.13

Ensembl Transcript ID

BGIOSGA020287-TA

Ensembl Protein ID

BGIOSGA020287-PA

Length

5541

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28270061..28275601

Sequence Coding Region

28270061..28270117,28270256..28270320,28271744..28272052,28273889..28274198,28275365..28275442
,28275551..28275601

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28270061..28275601 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28270061..28275601 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATATAAAATGGGCTTCATCTTCTTCTTCTTCCTCTGGCTCTGGCTTCTGGTGGAGGAGGAGGAGAGGAGTGAGGAATCTTTGGCTTTGTCAGGTGAATTGGAGCGAGGTGTTCGCAGGGCGAGCTCTGGTCCGGCAATGGAGAAGGAGGCGAGGAACCACTACCACACGCGGGGCTCCACCCGCGGCGGCGGCGGCAGCGGCGGCGGCGGAACGGCGGCGGAGCGCGACCTGCTCCTGCAGTGGGGCAACCGGAAGCGGCTGCGCTGCGTCAAGGTGCACCGCCGCGACGTCGACGCCGCCGCCACCGTGGCCGCCGAGAAGGCCGCGGCCAGCCAGCGCCGTGCGGCCGCCGCCGCTGCCGCCGCGGCGGCTCACCACCACCGCCACCACACAACCGCCGGCCACGCCCACCACCGCGCTGTCAGGAATTCAGAGGAGTCTGGAGCAATGAGATCTTCAGCGCAGCAGCATCAGATGAACGGGATCCGGGCAGTCGCCTCACCTGAAAGAGAACGCCCTGCAAGGGGCAGCAACATCATCAACAACAATGGAGGTCCGCCGACCTCCCCAGATGACAAGAAGGGTTCGTCGTCAGGGAGCGAGGGGTCGATCTGGCCCAAATTTGCAGTCGCCCTGACGAACAAAGAGAAAGAAGAGGACTTCTGGGTGTTCAAAGGATCCAAGCTTCCTCAGAGGCCCAAGAAGAGAGCCAAAGTCATCCAGAGGACAGTGAATCTTGTATGCCCTGGAACATGGCTTTGCGACTTGACACTGGAAAGATACGAAGTCCGAGAGAAGAAGGTTTCTAAAAAGCGCCCCAGGGGGTTGAAAGCAATGCACAACATGGACAGCGACTCTGAATAA</cdnaseq>

Protein Sequence

<aaseq>MAYKMGFIFFFFLWLWLLVEEEERSEESLALSGELERGVRRASSGPAMEKEARNHYHTRGSTRGGGGSGGGGTAAERDLLLQWGNRKRLRCVKVHRRDVDAAATVAAEKAAASQRRAAAAAAAAAAHHHRHHTTAGHAHHRAVRNSEESGAMRSSAQQHQMNGIRAVASPERERPARGSNIINNNGGPPTSPDDKKGSSSGSEGSIWPKFAVALTNKEKEEDFWVFKGSKLPQRPKKRAKVIQRTVNLVCPGTWLCDLTLERYEVREKKVSKKRPRGLKAMHNMDSDSE</aaseq>

Gene Sequence

<dnaseqindica>1..57#196..260#1684..1992#3829..4138#5305..5382#5491..5541#ATGGCATATAAAATGGGCTTCATCTTCTTCTTCTTCCTCTGGCTCTGGCTTCTGGTGGTGGGGGGGAGGAACAGGAAGAACACGGCCGGCCACAAAGGCGTCCCGATTTTCTCTCGCTGGGTTCCGTACTCTTCTCACCGCAGCCTGAGGAATCCATTGTGTCGGTTCTTCTCTTGATCTGTCGGTGTTCTTGAGGAGGAGGAGGAGAGGAGTGAGGAATCTTTGGCTTTGTCAGGTGAATTGGAGCGAGGTGTTCGCAGGTACTGCCCTTAACAGTTTGATTCGCTGCGTTTTTGGTTGTCTCTGTGGTGTTTTGTTTGGTAAAATTTTTGGTGGGGCTTGGAGTTGGAAAAGTTTTACTTTCACAGTGATGGATAATTTTTCCCTTCTGAATTGTTGTGAGTTCTGGCTTGTGGTTTGTTCGAATTCTGGATTCTGCGGTTCTTGCTAATTGGTTGTTTGATCTGGAAGATTCAGTTCCCTCTTTATTCCCCCGGGATTAAATTCCTTTTTGCGGCTGCTTTTTCCTGTGCTGGAATTCTTCTGCCGTTGTCTGCGCCTCTGTCTGCGATTGGGAATGGAGTGAGGGATGATTCAGACTGGGTAATTTGAATCCAATTTCGCCAAGACGCATTAGTTGCATCAAGTGTGCTTCATATCTGAGCTGCCTAACTCGGGATTTGCGCGGTTGGGGGTTCTGATTGGGATCGACTTGATTTCGTCACAAATCTTGTCGGTTTTAATTTGGTTTTCCTTGTAGTAGGTCGATTGGAAAGAGGAAGCTGATTTTCCTTAGGTAGGATGCTGGTGATGATTTGGGTCATCCCCTGCGTTTTGCTTCTCTCGTGTTGATGATTTTGTATACCTCACCAAGTTAGCACATTTTACTATTGTTTTTTCTGCTCCCAAATTGGCTTGTTCGTCTGCTCGCCGTTTTCTTGTTCTCGTCTCAAATTTTGTCCGATTTGTTGTCCCCTCTTTCTAACTTTTTCACTGTCCATTTCTGTGTTGAATTTTCAATTTTGGTTCTGTACTGTAGGATTACCGAAAATTGTATCGTTCTGTTTTTTCTCCCCTTTATCTAGGTTGCTTTTTCTTTCCAGAATAGATGAGTTAAATTGAACTGAATATCTACCTTCATCTTAAATTCGATCTGTTAATTTGTCTGATTCTTGCCCGATTTTGAGTTCGTTCAGTCTGAATTTTTTTTAAGGTTTCAGTCTGAATTTTTGAAAGCAAAGTGGTCGCAAAACTCCCAAAAGTTTGCAACTTTATCTGGCTGATTTCCTCGGCCCCTTAAAATTGAGTTGCATTTTAGTGGTGTCTCATCTTGTTCCGGTGATTTGATCGGGCAGGTGAGAAGATTTTTTTTTTTTTTTTTACTTTTGGGTGGAGGGTGAAATTGAGCTAAAGTTTGTTGAACCTGCCCTTCTCCTAGTTCGTACGGAGAATTAAAGCGGAAGATTTGTAATAAAATCTTGAGATTATTTTTAGACCAATTGGTCTGAGCTGAATAGCTGATCTGTCCTCAAAGCAATTTCCTCTGCAATTCTTCACTATTCCAATCTGATTGAAATTCTAGCAATTTCCCTTCCCACCATGAATCTTTCTTCCTTCCCTTCTGCTGCTGAATTTCTGTGTTTTTTTTTCTTTTCTTTTTTTTTGTTGCTGTGACACGTGCAGGGCGAGCTCTGGTCCGGCAATGGAGAAGGAGGCGAGGAACCACTACCACACGCGGGGCTCCACCCGCGGCGGCGGCGGCAGCGGCGGCGGCGGAACGGCGGCGGAGCGCGACCTGCTCCTGCAGTGGGGCAACCGGAAGCGGCTGCGCTGCGTCAAGGTGCACCGCCGCGACGTCGACGCCGCCGCCACCGTGGCCGCCGAGAAGGCCGCGGCCAGCCAGCGCCGTGCGGCCGCCGCCGCTGCCGCCGCGGCGGCTCACCACCACCGCCACCACACAACCGCCGGCCACGCCCACCACCGCGCTGTCAGGTAGCCATTTTCTCTCTCTTTTTATTTCTTTTTTTTTTGTTTAAAAATCATTTTTGGTATTTGCGATGTTGCCGTGCCCGTTGCGTGTGCTCTCTGACTGCTTTGTTGTTAAGCGTCAGTTAAACTAATGCGATAAGATTTGGAGTAACTGTTGCGTTGAAAGAACAACTGGCCGTCACGTGATTGGCTGCCCCGGGCACGTGACATCGAGCAGCGTTAGTGTTCTTGATCTGATTCGGTTTCACTTTGGGTGTCATTGCCGTTGTGACTGTATGATGAAGAGGTTACTAAGCACAAATAGTGGTTTATATATTGATGGAGGCACGCATTATAAGCAATGAATTGATGGTTTTGGTTTGTAACGGGAGATGATTATGGTGTCCAAAATCGTTGGGTTTGTCTACGGGATGTGAAATGAAGACCATGATGTTTTTGTGGTCTTGACACTAATTTTCTTTGTTTGATTCTGGTGTGCTAGATACTGGTTTTACTTTTTATGGGTGATTGTGTTACTTTTTATGCTCAAATTGGGTCTTTGAAAGGCTAAAATATTGGACAATTTGAGGGATATGTTCTTTCAATAACAAGCAAGATGGTACTTGCTGAATTTTTTGGTCAATCTATCTCCAAGGTTCCAACTTAGCTGACTTGGTTTGGCTGTCGATCTCTATCTAGGTCAGGGCCATATGTGAATTATTAAGAGTTCTTTTCTGAAACGGAACTGCCAATTGTGAAGGCTGCTTCCGTTTCGGTTGCCTCATCCAGTGTATGCGGCTTTGCTACAACGATGTTCTTTGCGAAACAACTGTGTCTGAGGTTGACGCTAATAGCTTATCATAATTACATTCGGTCTGCCTTTGGATGCTAGTCTCAGCTAATTTTCTGTCGACTAATTTTGGCTTGAGGGGGGAACACCATATTTATCTCAAGTCAGTCACAACCACTCGTAAGGTGGATGGTGACAACTTGTTCATTCATTGTGACGTTCTCTTTCTTCCTGTAATGCTTTGTTTCTTATCTGGAGATGATGAAACATGACATAGGTAATTGCTGAAATTTATTGCCTGCTTACTTGTCCCTTCCCCCAAAATGTGATGAATCATGCATTTTTGGTGCTCCATTTCTCCCTATGTGAGAATCTAAGAATGATTTGCTGTAAGAAGATTTAGAGATAAAAATCTATTTATCCAGTTTTCACCGCGAAATCAGTCACTGTTGTTGAATGTTCATTTTGTTTCTAGCAATAGATTATCTGTCACCTTATTTTGCTTGACTAATAAGAAAAACACAGGACTGCCTACTGAAGATTAAACATACAGTTACTGTGCTTAATAAAAAATGGTGGTTAGATGTACACAACCTTTTTATGAAGAGAATTAAATGCACAATTTTGTCAAAGTGTTCGGTTTGTTTATTGTCCCCCCCCTCCCCTTTTAGATGTTTGTTGGGAATTTTCTCAAACATACTTCCTCCGTTTCATAATGTAAGACTTTTTAGCATTACTTACATTATATAGAATTTCATTAACATATATATGAATATTGAGAATACTAGAAAGTCTTACATTATGAAACGGAGGGAGTAATATGTGATGCCCCAAAACTGTGTTTTATTCTAATTCTACTACTCCTCGGATGAATAGGCAGAGCTCCAGCCAAGTTTTTCCTCTAAAAAAAATAATCATTTTTGGCTCTATGTTCTCCTTTTCGGCCAGACAAGCTTCAGAATCTAACATTGGTTGCTTGCAACCACAACCAAACCAAAATCAAAAGATAACATTAGCACGTTGCCATTTTTTCTGCATCACTTATAATAGCTGGTGTTCTGGATTGGTAGGAATTCAGAGGAGTCTGGAGCAATGAGATCTTCAGCGCAGCAGCATCAGATGAACGGGATCCGGGCAGTCGCCTCACCTGAAAGAGAACGCCCTGCAAGGGGCAGCAACATCATCAACAACAATGGAGGTCCGCCGACCTCCCCAGATGACAAGAAGGGTTCGTCGTCAGGGAGCGAGGGGTCGATCTGGCCCAAATTTGCAGTCGCCCTGACGAACAAAGAGAAAGAAGAGGACTTCTGGGTGTTCAAAGGATCCAAGCTTCCTCAGAGGCCCAAGAAGAGAGCCAAAGTCATCCAGAGGACAGTGAATGTATGCACCTTTCATCTTAGCTTTATATCTCATTAAATTCAATGCATTCCAGTTCACATCAATGCGCATAGGATTCTTATCTTGGGGCATGTTTAGTTCCCAAAAACATCACATCGAATATTTGGATACATGCATGGAGCATTAATATATTGATTTTTAAAAAAACTAATTGCACAGTTATAGGGAAAATCGTGAGATGAATCTTTTGAGCCTAATTAGTCCATGATTAGCCATAAGTGCTACAGTAACCCACATGTACTAATGACGGATTAATTAGGCTAAAAAGATTCGTCTCGCTGTTTCCATGCGAGTTATAAAATTAGCTTTTTTATTCGTGTCCAAAAACCTCTTCTGACATCCAGTCAAACGTCCAATGTGACACCAAAAAGTTTTCTTTTCGTGAACTAAACAGGCCCTTGGTGCATATGATATGGTAAATAATTGTGTATATGTTCCTTGCTTGTTGCACAGAGATTCTAAACTCATTATTGCAACATGCTATTAGCCTGTAGTTGTCAGCTCCTAACTTACTGTGCTATAGTTCAGTAACACAAGAATTTGCCATGACATACTGGCTATGCATTTTTTTTTAATTTTAAATAGATGACATGAGATCACATGGAACATAGGGCCACCTCTGCGCACGCTGCCTGCCTTGCTCCTTAACCAAACAAGACGTGCAAATATAATACTGATATGCAGTGGATGCTTCATTTATTAAATTTGTTTGCCTAGAGGTGTCCATAATTCGGTATGCTTCTGTCTGAAGCAAACATAAGACAGATTAAAAGCTGATTGCTGATTTCCATTTGATTGCCACCTCAATGCTTGATCTGTACAGTCCCTACCATTGAGTGTGATCCTTACCTTCCTTCATTGAAGCAGCCAAACGAATTGCTATACTTTTCATCTTGTGACTACATTACAGTTTCTGTATCAATGAGCTGATCTGGCAGGCAATTTGCCAGGAAGTGCTGTGCTGTTTCAGTTGAGTTCCATTTCTAATATATGGCAGATCAATGATTAGTTAGTTGTGTCCTACGCAGGCTTAAGTTATGAGTCAGACAACCATTGATATCTATTGTTTTGTCGATATGATTCTCTTGAGGTTGCATATAACCCCGTCACCATATTATTCTTCCCTAAGTTCTGTTCATCTTTGGCAGCTTGTATGCCCTGGAACATGGCTTTGCGACTTGACACTGGAAAGATACGAAGTCCGAGAGAAGAAGGTTTCTAAAAAGGTGAGTTGGATTGGATTAGTAACATGCTAAAATCAATTTCAGTCTTGCAACTCCCTAGATGACATCCTCGATTAAATGAGCCTCCTTGATTGTTTTCTGGTTTCACAGCGCCCCAGGGGGTTGAAAGCAATGCACAACATGGACAGCGACTCTGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020287