BGIOSGA020293

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Revision as of 03:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020293| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020293, complete gene.| tag = OJ1288_...")
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Gene Name

BGIOSGA020293

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020293, complete gene.

LocusTag

OJ1288_A07.5

Ensembl Transcript ID

BGIOSGA020293-TA

Ensembl Protein ID

BGIOSGA020293-PA

Length

2254

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28323307..28325560

Sequence Coding Region

28323307..28323447,28323526..28323657,28323742..28323924,28324020..28324046,28324157..28324364
,28324539..28324620,28324773..28324881,28325000..28325119,28325243..28325560

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28323307..28325560 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28323307..28325560 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGCCGCCGCTCGCCGGCGTGGTGGTGGTCGCCGCCGCGCTCCTGCTCCTCCTGCCGGAGGCCGCCGAGCCCCGCACTCTCCTCTCGCTCGACGACTTCGGCGCCGTCGGCGACGGCGTCGCCAACGACACGCAGGCCTTGGTGGACGCCTGGAGCGCCGCCTGCGCCACCGGCGACCACACCTTCCTCCACGTCCCCGCCGCCAAGTCCTACCTCGTCTGGCCGGTCACCCTCGCCGGACCTTGCAGGGAGGAGATCAAGCTCTTCATCTCCGGCAACATCGTCGCGCCGGAGAGCCCCGACGAGTGGCCGGAGGGCGGCGGCGGCGGCGGCGAATGGCTCCACTTCGTCGGCGTCAGCGACCTGACGCTGAGCGGCGGGGGCGTCATCGACGGCCGTGGCCACCGGTGGTGGGCCCGGTCGTGCAAGGCAAAGCACAACGCGACCGAGAATTGCACTACCCAGGCTGCTCCAAAGGCGCTGCACTTCGAGGATTGTCAGGGTATCAGCGTGATGGGGATCACGCTGCAGAACAGCCAGGAGAGCCACCTGACGTTCACCCGGTGCTCGCACGTCAAGGCCAACTACCTGAGGATAACCTCGCCGGAGGACAGCCCGGACACCACTGGAGTTCACGTCGTCAGCTCGCGCAATGTTCACATCATGGACGACTCGATCTCCACAGGTCATGATTGTGTCTCGATTGTGGGCAATTCTACGGATGTTCGTCTAAGAGCCATCTCATGTGGACCTGGCCATGGTATCAGTATTGGAGGATTAGGCGAGAACCGAAGTTACCACAGGGTAGAAAAGATCAAGATGGACACCCTGTTCATTTCCAACACTGAAAACGGCGTACGCGTCAAGACCTTCCAGGGCGGCTGCGGCACCGCCCGGAAAATGAAGTTCGGTGACATCCTTATGAAGAACGTCAAGAACCCGATCGTCATCGATCAGCAGAACTCCTCGAGCAACGAAATTCCCTGCGGATCAAAGAACGGAAGCGCGGTGACGGTGGGGGAGATCAGCTACACGGACATCACCGGCACGTCGGCGTCGGAGCGGGCGGTGACGTTCGCGTGCAGCGAGGCGGCGCCGTGCAGCAAGCTGTCGCTGGAGAACGTGAACATCACCATGGCCGGCGGGCAGAACGCGTCCGCCTACTGCCACCACGCGTTCGGGAAGAGCGTCGGCGTCGTCGTCCCGGACTCGTGCCTCGGGAAGGAGGACTACCTCCGCCGGCAAGGCCCCGCCTCCGCCGCCGCCGCCGGCGGCGGAACGCAGGAGAAGGGAGGAGAAGATGACGATCGGTGA</cdnaseq>

Protein Sequence

<aaseq>MAPPPLAGVVVVAAALLLLLPEAAEPRTLLSLDDFGAVGDGVANDTQALVDAWSAACATGDHTFLHVPAAKSYLVWPVTLAGPCREEIKLFISGNIVAPESPDEWPEGGGGGGEWLHFVGVSDLTLSGGGVIDGRGHRWWARSCKAKHNATENCTTQAAPKALHFEDCQGISVMGITLQNSQESHLTFTRCSHVKANYLRITSPEDSPDTTGVHVVSSRNVHIMDDSISTGHDCVSIVGNSTDVRLRAISCGPGHGISIGGLGENRSYHRVEKIKMDTLFISNTENGVRVKTFQGGCGTARKMKFGDILMKNVKNPIVIDQQNSSSNEIPCGSKNGSAVTVGEISYTDITGTSASERAVTFACSEAAPCSKLSLENVNITMAGGQNASAYCHHAFGKSVGVVVPDSCLGKEDYLRRQGPASAAAAGGGTQEKGGEDDDR</aaseq>

Gene Sequence

<dnaseqindica>1..141#220..351#436..618#714..740#851..1058#1233..1314#1467..1575#1694..1813#1937..2254#ATGGCGCCGCCGCCGCTCGCCGGCGTGGTGGTGGTCGCCGCCGCGCTCCTGCTCCTCCTGCCGGAGGCCGCCGAGCCCCGCACTCTCCTCTCGCTCGACGACTTCGGCGCCGTCGGCGACGGCGTCGCCAACGACACGCAGGTGAGCAGCAGCTAGCCACTCCAGCTTCACTAGCTCAGCTCACAATGGCGTCTTCACTCTCTCTGCCGCATCGTCCAGGCCTTGGTGGACGCCTGGAGCGCCGCCTGCGCCACCGGCGACCACACCTTCCTCCACGTCCCCGCCGCCAAGTCCTACCTCGTCTGGCCGGTCACCCTCGCCGGACCTTGCAGGGAGGAGATCAAGCTCTTCGTACGCACACACCACCACACACTATCTCCGCCTCTTCCATTTCTTGTGCCTTATCCACTTCGTTAATCGCGTCCGGTTCCTCAGATCTCCGGCAACATCGTCGCGCCGGAGAGCCCCGACGAGTGGCCGGAGGGCGGCGGCGGCGGCGGCGAATGGCTCCACTTCGTCGGCGTCAGCGACCTGACGCTGAGCGGCGGGGGCGTCATCGACGGCCGTGGCCACCGGTGGTGGGCCCGGTCGTGCAAGGCAAAGCACAACGCGACCGAGGTAACCAATGGTCTCCTCTATGACCATGATGTTGCCAATTGCAACACAGAAATATCTGAATTATTCTGAAGTTCTGAACAATCTTGTCTCTGCAGAATTGCACTACCCAGGCTGCTCCAAAGGTAGATTTTCGCTTTAATTTGATCAGAGATCTTGGCTAGCTCGAGAGGATTTGGACCAAAAAGATGGAGAATTCATGCATGGATTGCATTTTCGCGGTGTTAATTTGCAGGCGCTGCACTTCGAGGATTGTCAGGGTATCAGCGTGATGGGGATCACGCTGCAGAACAGCCAGGAGAGCCACCTGACGTTCACCCGGTGCTCGCACGTCAAGGCCAACTACCTGAGGATAACCTCGCCGGAGGACAGCCCGGACACCACTGGAGTTCACGTCGTCAGCTCGCGCAATGTTCACATCATGGACGACTCGATCTCCACAGGTACTACACATTTTTTTTTTCTTCTGAAGAAATGGAGCTTTGCTCTGAATTTCTGAATGATGTCTGTTGCTGAAACAGATGTCTCGTTTGAAATTAGTTGATCAGATATGTTTTGCAGGACAGTAAAAAGGCTCACAAAGAACATTTTCTTCCCCTTCTTTTTGCCTTTTTAAGGTCATGATTGTGTCTCGATTGTGGGCAATTCTACGGATGTTCGTCTAAGAGCCATCTCATGTGGACCTGGCCATGGTATCAGGTTAGCATTTTTTTCTCCATCTTTTCAGTGGAATTTGCATCAGATTTTGAACTAAATTCAGACAATGACTCCACCCAAACACACTCCACATGACCACATCCATTTATAGTAGCAGTTCGTAACAGAGCTAATTAACAGTTTGTGCTTGTCAGTATTGGAGGATTAGGCGAGAACCGAAGTTACCACAGGGTAGAAAAGATCAAGATGGACACCCTGTTCATTTCCAACACTGAAAACGGCGTACGCGTCAAGACCTTCCAGGTTAACCGTAAACCCAACGCCCACTTCTCACCTGAATCTTCGTCAGAAACACCCAAGATTACACTGAACTCTGAACTCAAAACTGCCTAGCTAGCTAACTTCTGCTGTTGTTCTTCAGGGCGGCTGCGGCACCGCCCGGAAAATGAAGTTCGGTGACATCCTTATGAAGAACGTCAAGAACCCGATCGTCATCGATCAGCAGAACTCCTCGAGCAACGAAATTCCCTGCGGATCAAAGGTACAGTGAGCTCATGATCAGCATCTGATCTGATCAGCACATAGTAGAAGATCAACATCTCTGAACATTTTGCCTAACATCTCTGAACATTGAGTTTTTTGGGGTGGATTGGATGGTGTGCAGAACGGAAGCGCGGTGACGGTGGGGGAGATCAGCTACACGGACATCACCGGCACGTCGGCGTCGGAGCGGGCGGTGACGTTCGCGTGCAGCGAGGCGGCGCCGTGCAGCAAGCTGTCGCTGGAGAACGTGAACATCACCATGGCCGGCGGGCAGAACGCGTCCGCCTACTGCCACCACGCGTTCGGGAAGAGCGTCGGCGTCGTCGTCCCGGACTCGTGCCTCGGGAAGGAGGACTACCTCCGCCGGCAAGGCCCCGCCTCCGCCGCCGCCGCCGGCGGCGGAACGCAGGAGAAGGGAGGAGAAGATGACGATCGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020293

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020293&oldid=49049"