BGIOSGA020297

From RiceWiki
Revision as of 03:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020297| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020297, complete gene.| tag = OS05G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020297

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020297, complete gene.

LocusTag

OS05G0543600

Ensembl Transcript ID

BGIOSGA020297-TA

Ensembl Protein ID

BGIOSGA020297-PA

Length

1174

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28375501..28376674

Sequence Coding Region

28375501..28375639,28375756..28375885,28376011..28376674

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28375501..28376674 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28375501..28376674 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGACGGCTGTCGTCGTGCGGCGGCGTGCAGGCGAAGCTGAGGAAGGGGCTTTGGTCTCCCGAGGAAGACGATAAGCTGTACAATCACATCATCCGACATGGCGTCGGCTGCTGGAGCTCCGTCCCCAAGCTCGCAGGGTTGCAGCGATGCGGCAAGAGCTGCAGGCTGCGGTGGATCAACTACCTCAGGCCAGACCTGAAGCGCGGGAGCTTCTCGCAGCAGGAGGAGGACCTCATCGTCGCGCTGCACGAGATCCTCGGGAACAGGTGGTCGCAGATCGCGTCGCACTTGCCGGGGAGGACGGACAACGAGATCAAGAACTTCTGGAACAGCTGCCTCAAGAAGAAGCTCCGGCAACGCGGCCTCGACCCGGCCACGCACAAGCCCATCGCCGCCGCCGCCGCCGCGGCGACGTCCTCGGAGTCGGCGGTCACCCAGGTGGATGAGGATCACAAGCCCCACGGCGCCGCCGCCGCCGCCGCCGACGGCCTCGCCGCGAACGCCAAGCAGTCGGTGTTCGACCCGTTCCCGGTGACCGACTTCGGCGCCGGCTTCGACCTCGGCGCGGCGAACATGGCGGCGGCGCTGTACGGCTCCCACCCCGACGACGGCGCCGGGTTCGTCGCCGACTACAGCAGCGTGCTCGACGTGTCGGAGAACCTGGGCTACGGCGAGAGCTCCAGCAACAGCAGCAACTGGACCTGCGCCGAGGTGAGCAATGTGCTCGACAGCGAAGTGCTCAACTGGGCCGCCTCGGCCGGCGCCGACGCCGCCGCCAAGGCAGAGCCCTTCGCCGACATGGAGCAGCAGCACAGTGGCTATGGCGGCGAGTATCAGGTGGAAGACGACGCCACGCTGGAGCACAAGTTCTCGCTGCCATGCCATGAGCAGAGCTTGGCTCAATTCGACTTCAACTTGGAATACTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MGRLSSCGGVQAKLRKGLWSPEEDDKLYNHIIRHGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSQQEEDLIVALHEILGNRWSQIASHLPGRTDNEIKNFWNSCLKKKLRQRGLDPATHKPIAAAAAAATSSESAVTQVDEDHKPHGAAAAAADGLAANAKQSVFDPFPVTDFGAGFDLGAANMAAALYGSHPDDGAGFVADYSSVLDVSENLGYGESSSNSSNWTCAEVSNVLDSEVLNWAASAGADAAAKAEPFADMEQQHSGYGGEYQVEDDATLEHKFSLPCHEQSLAQFDFNLEYF</aaseq>

Gene Sequence

<dnaseqindica>1..139#256..385#511..1174#ATGGGACGGCTGTCGTCGTGCGGCGGCGTGCAGGCGAAGCTGAGGAAGGGGCTTTGGTCTCCCGAGGAAGACGATAAGCTGTACAATCACATCATCCGACATGGCGTCGGCTGCTGGAGCTCCGTCCCCAAGCTCGCAGGCAAGCAAGAAAGCACGCAATTCAAATGAGACACCAACTGTTCGATCGATCGATCGATCGCCATTGCCGATTTGGCGAGCTTGATTGGGCTAATTTTGGTTTTTTGGGTCGTGCAGGGTTGCAGCGATGCGGCAAGAGCTGCAGGCTGCGGTGGATCAACTACCTCAGGCCAGACCTGAAGCGCGGGAGCTTCTCGCAGCAGGAGGAGGACCTCATCGTCGCGCTGCACGAGATCCTCGGGAACAGGTCGGTTTCATGTCTTGGATTCTGCATTGCCGTTTCGGAGCTTGCTTGCTTTCTTGCAATGGCGGCAGCCATGGAGGTTGGTCGGAGGGATAAAGGATTTGAGGGGGAATAATGGTGTGGTGCAGGTGGTCGCAGATCGCGTCGCACTTGCCGGGGAGGACGGACAACGAGATCAAGAACTTCTGGAACAGCTGCCTCAAGAAGAAGCTCCGGCAACGCGGCCTCGACCCGGCCACGCACAAGCCCATCGCCGCCGCCGCCGCCGCGGCGACGTCCTCGGAGTCGGCGGTCACCCAGGTGGATGAGGATCACAAGCCCCACGGCGCCGCCGCCGCCGCCGCCGACGGCCTCGCCGCGAACGCCAAGCAGTCGGTGTTCGACCCGTTCCCGGTGACCGACTTCGGCGCCGGCTTCGACCTCGGCGCGGCGAACATGGCGGCGGCGCTGTACGGCTCCCACCCCGACGACGGCGCCGGGTTCGTCGCCGACTACAGCAGCGTGCTCGACGTGTCGGAGAACCTGGGCTACGGCGAGAGCTCCAGCAACAGCAGCAACTGGACCTGCGCCGAGGTGAGCAATGTGCTCGACAGCGAAGTGCTCAACTGGGCCGCCTCGGCCGGCGCCGACGCCGCCGCCAAGGCAGAGCCCTTCGCCGACATGGAGCAGCAGCACAGTGGCTATGGCGGCGAGTATCAGGTGGAAGACGACGCCACGCTGGAGCACAAGTTCTCGCTGCCATGCCATGAGCAGAGCTTGGCTCAATTCGACTTCAACTTGGAATACTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020297