BGIOSGA020322

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Revision as of 03:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020322| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020322, complete gene.| tag = P0560C0...")
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Gene Name

BGIOSGA020322

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020322, complete gene.

LocusTag

P0560C03.19

Ensembl Transcript ID

BGIOSGA020322-TA

Ensembl Protein ID

BGIOSGA020322-PA

Length

1476

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28749611..28751086

Sequence Coding Region

28749611..28749844,28750081..28750152,28750253..28750320,28750403..28750529,28750610..28750690
,28750788..28750880,28751003..28751086

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28749611..28751086 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28749611..28751086 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGACCACTTTGCAGTAATGGCCGGCCGGTTGCTAACGGAATCGACTGTTCAGTCTGCCATTGATGAGGCCTCTGCTGCTGCCATGCCTTCTTCAGTGATTGCTTCTGAACATAATGATGTTCAAGATGAGAGGGAGAAGAGTGGTGTTCTTGTAGAATGTAGAATTTGCCAGGAAGAGGATGATCAGACCTACATGGAGACCCCTTGCTCCTGCAGGGGCAGCTTGAAGTATGCTCATCGCAAATGCATTCAGAGGTGGTGTGATGAGAAGGGAGACACCATATGTGAGATATGCTTACAGCAATACACACCAAACTACACAGCACCTGCAAAGTTGTTTCAACATGGAAGAAACTCAATTTTCTTCAGAACTCCTGGTTACATTCAAGCACAGGTCATGCAAAACACAGACCGAAGTGCTGCTGCCTCAACAAGCTACGATCCTGAACTCCCCAACCCAAAAGGTGTAATCTATTGTCGCATAGTTGCTCTGACTCTGATGGTACTCTTGCTACTCCACGACGCAATCTCGGTTTTCCTCGGTGATCACGATGCTTACACCGTCGCAATGATCACTCTGCTGATGCTTAGAACGACTGGAATCGTTATACCTGTGTACATCATCTTGCTGTCCTTAACTGAACTGCTTCATCGACGCAACCAGCGGCAGATTTCAGACGCTGCTGCTGCGGTGAACATCAACCAGCAGGCGCCACAGTCACCGCGGCGACAGCATGTCATCAGCATCCAATAA</cdnaseq>

Protein Sequence

<aaseq>MADHFAVMAGRLLTESTVQSAIDEASAAAMPSSVIASEHNDVQDEREKSGVLVECRICQEEDDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTICEICLQQYTPNYTAPAKLFQHGRNSIFFRTPGYIQAQVMQNTDRSAAASTSYDPELPNPKGVIYCRIVALTLMVLLLLHDAISVFLGDHDAYTVAMITLLMLRTTGIVIPVYIILLSLTELLHRRNQRQISDAAAAVNINQQAPQSPRRQHVISIQ</aaseq>

Gene Sequence

<dnaseqindica>1..234#471..542#643..710#793..919#1000..1080#1178..1270#1393..1476#ATGGCGGACCACTTTGCAGTAATGGCCGGCCGGTTGCTAACGGAATCGACTGTTCAGTCTGCCATTGATGAGGCCTCTGCTGCTGCCATGCCTTCTTCAGTGATTGCTTCTGAACATAATGATGTTCAAGATGAGAGGGAGAAGAGTGGTGTTCTTGTAGAATGTAGAATTTGCCAGGAAGAGGATGATCAGACCTACATGGAGACCCCTTGCTCCTGCAGGGGCAGCTTGAAGGTAAAATTCAGTATCAAACTAATTAAATTCCGTTTCTGCAATTCGGGGTATGCCAGATTTAGTTGTTAAACAACTTTATTGGTCAAGGAATCTATTTAGGCCATCAACGTATTTTGCTTCTGCACAGGATATTTTTAGGCTTATGATAAATTTTGTTCCTGTATTTCAGACCTCTTAATCTGTAGTAGTGCTGCGAAATAAATTTTGTAACAGTGCTATATACATGTTTCTTTCAGTATGCTCATCGCAAATGCATTCAGAGGTGGTGTGATGAGAAGGGAGACACCATATGTGAGATATGCTTACAGGTGAAATTTTCACCGAACACCTAGTACTCATGGCCATCTCAAAACAAGTTGCTCCTACAAAGAAATTAACATATAGTAGCCTGTATTTCTGTGGATACAGCAATACACACCAAACTACACAGCACCTGCAAAGTTGTTTCAACATGGAAGAAACTCAATTTTCTTCAGGTAATTGATGTATCATCACAAAAGAAGCACGATTCTGAGCTTCTGATTAGACATGGATCATCTCAAGCTTTATCATTTGCAGAACTCCTGGTTACATTCAAGCACAGGTCATGCAAAACACAGACCGAAGTGCTGCTGCCTCAACAAGCTACGATCCTGAACTCCCCAACCCAAAAGGTGTAATCTATTGTCGCATAGTTGCTCTGACTGTAAGTGCCTGAAAAAAAAAAGAATCATCATTTCGTGCCACCACCAAAAATTAACATTCAGACACACTCAAATTCATCAGCTGATGGTACTCTTGCTACTCCACGACGCAATCTCGGTTTTCCTCGGTGATCACGATGCTTACACCGTCGCAATGATCACTGTAATCCTCTGAATTCTCAGATAATAGCACACATATTGATATTACCCTACTACTTTGATGATTGATTATTTGAGCCAAAATCATGCTTCTGAACCAGCTGCTGATGCTTAGAACGACTGGAATCGTTATACCTGTGTACATCATCTTGCTGTCCTTAACTGAACTGCTTCATCGACGCAACCAGCGGCAGGTTCACCAACCTCATTCTGAATTCTTGATATAAATGTACACAATCTGCAGTTCAATGCTGCTGAACAATCCATGCAGCTTGTTTCACACTGCAATCTAACCGTCAGAAAATGCAATTGCCAGATTTCAGACGCTGCTGCTGCGGTGAACATCAACCAGCAGGCGCCACAGTCACCGCGGCGACAGCATGTCATCAGCATCCAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020322