BGIOSGA020333

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Revision as of 03:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020333| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020333, complete gene.| tag = OJ1214_...")
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Gene Name

BGIOSGA020333

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020333, complete gene.

LocusTag

OJ1214_E03.4

Ensembl Transcript ID

BGIOSGA020333-TA

Ensembl Protein ID

BGIOSGA020333-PA

Length

4024

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28917633..28921656

Sequence Coding Region

28917633..28917839,28917924..28918001,28918100..28918149,28918266..28918319,28918517..28918569
,28918653..28918725,28919001..28919062,28919471..28919539,28919735..28919843
,28920209..28920276,28920533..28920633,28920868..28920963,28921054..28921121
,28921447..28921492,28921576..28921656

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28917633..28921656 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28917633..28921656 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGATTGGTCGTCTCGTGCGGACGCAGACGCAGCCAGGCTGGGCACCAACCACCCGAGGAGGAGGAAGACGACGACCACTCGCTCTCGCGCTCGGGCGGCTCTCGTCCCGTCGTCCGGTGCGGTGCCGCTGCCTCGCCGCCATGCAGACTTCGCCGCCGCCGCCGTCCGTGCGCACGGTCTCCATCCCCTTCTCCGACCTCAAGGAGAGGGATAGGGACCTGAGCGGGAAGATCGAGGAAGGGCTCGGGCCCAACGGGCTCGGGATCATCTCCATTGCTGACGTGCCTGGTTTTCCCGTGCTAAGGAAAACGTTGCTGCGCCTGGCACCAAAAGTTGCAAACCTTCCTGAAGATGTGAAGAAAGAACTTGAAGACCCAGACAGCAGGTTTAACTTTGGATGGAGTCATGGGAAAGAGAAACTTGAGTCAGGGAAACTCGACACATTCAAAGGCTCCTTTTATGCCAACCCAATTTTGGATGCTCCAACCACTGATGATGTACTTGTGAGAAGGTACCCATCTTATTGCCGAACAAATATATGGCCAGCCAGTCATCTTCCTGAGCTCGAAATAGCATTTAAAGCTCTTGGAAAGCTGATGTTGGAAGTTGGCTTGATGTTGGCTCATCATTGTGATCGCTATGTAATGCAGCAAGGAGTGGGACCATATGATGGTGAAAGCCTTGAGCAGACAATTGCCAGCTCAAGGTGTCACAAGGGCCGCCTTCTGTATTACTACCCCCGGCAATTTAGTAAACAAGAGGAAGGTGGTTCTGTTTCATCGTGGTGTGGATGGCATACTGACCATGGATCTTTAACAGGACTTACATGTGCCTTGTTTACGAAAAATTCAATGGAGATCCCCTGTCCTGATAGTGCTGCTGGATTGTATATAAGGACTCGTGATGATAAAGTTGTTAAGGTTACATTTGAGGAGAATGAATTGGCTTACCAAGTTGGAGAAACCACTGAAATACTATCAAGAGGTCGTCTATGTGCAACTCCACACTGTGTGAAGGCCCCCAGCAGTGAAAACGCCTCGAATGTTGATCGTTCGACCTTCGCGATGTTCATGCAACCAGATTGGGATGAAAAGCTCAAGTTTCCAAGTGAAATTCCGTATCATCAAGAGTTGATCCCACCGAATGGAACTCTTACATTCGGGGAGTATTCAGAAAGATTGGTGAACAAGTATTACCAGGGAAAGACATGA</cdnaseq>

Protein Sequence

<aaseq>MEIGRLVRTQTQPGWAPTTRGGGRRRPLALALGRLSSRRPVRCRCLAAMQTSPPPPSVRTVSIPFSDLKERDRDLSGKIEEGLGPNGLGIISIADVPGFPVLRKTLLRLAPKVANLPEDVKKELEDPDSRFNFGWSHGKEKLESGKLDTFKGSFYANPILDAPTTDDVLVRRYPSYCRTNIWPASHLPELEIAFKALGKLMLEVGLMLAHHCDRYVMQQGVGPYDGESLEQTIASSRCHKGRLLYYYPRQFSKQEEGGSVSSWCGWHTDHGSLTGLTCALFTKNSMEIPCPDSAAGLYIRTRDDKVVKVTFEENELAYQVGETTEILSRGRLCATPHCVKAPSSENASNVDRSTFAMFMQPDWDEKLKFPSEIPYHQELIPPNGTLTFGEYSERLVNKYYQGKT</aaseq>

Gene Sequence

<dnaseqindica>1..207#292..369#468..517#634..687#885..937#1021..1093#1369..1430#1839..1907#2103..2211#2577..2644#2901..3001#3236..3331#3422..3489#3815..3860#3944..4024#ATGGAGATTGGTCGTCTCGTGCGGACGCAGACGCAGCCAGGCTGGGCACCAACCACCCGAGGAGGAGGAAGACGACGACCACTCGCTCTCGCGCTCGGGCGGCTCTCGTCCCGTCGTCCGGTGCGGTGCCGCTGCCTCGCCGCCATGCAGACTTCGCCGCCGCCGCCGTCCGTGCGCACGGTCTCCATCCCCTTCTCCGACCTCAAGGTAAGAGAGGAACCCGCTGCATAGCGTCGTATGGTTCTTGATTCCATCAGAGTTGCGACGCCGTTTTCTCTGCTGCTGATGCAGGAGAGGGATAGGGACCTGAGCGGGAAGATCGAGGAAGGGCTCGGGCCCAACGGGCTCGGGATCATCTCCATTGCTGACGTGAGTGTGACGCGTTGAAAACTGATGCGCGCTGCGTTCCTGGCCTGCAGAGAAAATTTCGAGTTCCTGAACTGAATTTTGTAGCCGTCTTTTTGCAGGTGCCTGGTTTTCCCGTGCTAAGGAAAACGTTGCTGCGCCTGGCACCAAAGTATGTTCTTCTCTTAGTCTCATCTTTGTGTTGTTCATAGGAGGCACATTTCAGTTTCAACATTTGCTTGATATTTGTAGTGAAATCTCTTGTTGCTTGCTTCCATTTTTTTTTAGAGTTGCAAACCTTCCTGAAGATGTGAAGAAAGAACTTGAAGACCCAGACAGCAGGTGAAAACAGAACTGCATGGTGGTGCCATTTGGTTCTGTACTTATGTTCTTAATCACGAATTTGATGTAGCCTATTATGTCCTCCAATTGGGAGCTCCTAGTTAGGATCAACACCTGAATTGTACTTCAACTTCTATCCATTTTGACAGTCTAGAGTGAGTACACAGCAATGATGAGTTTGCTCCTTTGCCTCTTAGGTTTAACTTTGGATGGAGTCATGGGAAAGAGAAACTTGAGTCAGGGAAACTCGGTAAGCACTTTTGCACTTTTATCTAATTATACATCTTACCATATGTGAGATATTGCACTTTATTGAAAAGATCTGTATCACAGACACATTCAAAGGCTCCTTTTATGCCAACCCAATTTTGGATGCTCCAACCACTGATGATGTACTTGTGAGAAGGTTCGTTTTTTCATACATAAATAATTTAACTCAGTTTACTGTTACAATTTAGCACTGGAGAAAACTGAACAATTTGGCAACCTTTATTATTCTAACTCCAACGAATTTAGTATGATTTGAGTTAATTAAAGTTTAATTATCTTACTATGGTCGATCATTTGTATCACTCAAAATGTCCTATTGTATTGCTAGTGCAAAAGAGTTGTATCATATACTCATAAAGACCAAATATGACCCTTATTATAGGTGTTTTTAATGTAATATTGAACCAGCAGGTACCCATCTTATTGCCGAACAAATATATGGCCAGCCAGTCATCTTCCTGAGCTCGAAATAGGTATGACTGACTGACCATTTGTATGTATATTGACTGACTTGAGGGCTATTTCTCAGTATAACAGTACATATTTGTTACCTTTTATCACTATTTTAATAACCCATTCCTACTTATTTTAGCCATTAAAATGGAGGACTTGCCATAGGCCCATAGCACATGTTTATATGTTATAAGTCAGGATATCTGTATTGAATAAATGTACCAAAGGTTGTACTCCATTTACCTTACTGGCTGTCTTGTATCTCAAGGTGCTAAATGTAAGATACTGAATGGTTAATGTTCATTTTCAGTGCCTCATGATCATTACATGCTGAAATATATTTTTAAGTGGTTTTGATTTTTGTAGAACTTATTATGTATTTCCATGCTAGAATCCAACCATTTTTACAACATTTCTTTCATTTGTAGCATTTAAAGCTCTTGGAAAGCTGATGTTGGAAGTTGGCTTGATGTTGGCTCATCATTGTGATCGCTATGGTATGTACTATATAATTCTATAGGCTTACCTGATATTTCCTTTAAAAATGTCCAGGGACAAACCACATCTGTTTGGCTAAGTAAAAAATCTCCACAATTTAACCTTTGGATTGATTATAATTGTCAACTCTGTACTTTGGTCTTTAAGTTTGGTATTCCATTGGTGAATTGGACCAACTTCTGTTTGTTTGTCAGTAATGCAGCAAGGAGTGGGACCATATGATGGTGAAAGCCTTGAGCAGACAATTGCCAGCTCAAGGTGTCACAAGGGCCGCCTTCTGTATTACTACCCCCGGCAATTTAGGTAAATATGATGTATACACAGTATTTCTGACAAGAAAAAACATGCATGAATTGCATCTCTAGGCAGTGATTCCTTTATGACCTTCTTGTATTTTGGAGTTAATAAGACTTAGGAATGGATAAACAAGATCAATGTCACGCGATTCCACTAAACAGCAAGATGGTGCCTATCAAGTATTACACACCATTGACACGCGATATCATCGCGCATATTATAAGGCATTTTACATGTGTTGTCCATGTAGATCAAAGCTTTCTAACTTTTCTTACCTTTGTAACAATCAATATATTTTTTTGGATTCAAGATTTTTCAATGTTCTAGCCTTTTAGTTGTAAGGATTGATGCTTGCATGTCTCTTATTTCAGTAAACAAGAGGAAGGTGGTTCTGTTTCATCGTGGTGTGGATGGCATACTGACCATGGATCTTTAACAGGTAATACATGTTATCCCTATGGTTGAATATTATCAGTTGCACGATAACTCCTGAACATGAAAGTTTGTTGTGGTCAAATGAGCATGTGGTGAAATTCTGAACCCATAACCTTACTGTATTATACATATATTGATAACCATAAATCTGATCTCCGTTTTGTTTCCTACTACTATCATCTATGAGGCTTTAGCGTTTAAAAAACGTTTGTTTTAATTTATATATTTTTTTCAATTCTGATTATGCATCCTACATGCAGGACTTACATGTGCCTTGTTTACGAAAAATTCAATGGAGATCCCCTGTCCTGATAGTGCTGCTGGATTGTATATAAGGACTCGTGATGATAAAGTTGTTAAGGTAATTTCCTGTTAATCACTATAGACTTATCATCAAGATGATGCTTTGTAATTTAGGTTGTACGCGGTCATCTCTACATTGAAATTGATCGGTGCTTGCAGATTTGGAAATGTAGCCAGACATTTGAAACAATGTTTAATCATTGTTAGTTGAATAATTGCCTGTGAATTGCATTAGCATATTATACAGGAGAGGGTTATGTGGTCTGCACTAATTGAAATTTTACTGCATAAGGTTACATTTGAGGAGAATGAATTGGCTTACCAAGTTGGAGAAACCACTGAAATACTATCAAGAGGTCGTCTATGTGCAACTCCACACTGTGTGAAGGTATTGTACTATAAATTTGTAGTCATGGGTAATCAGTGTTCCTAGTTCCTGCAGTTGTAAAGTAATTTATACTTTTACTGTTGTCTCTAGGCCCCCAGCAGTGAAAACGCCTCGAATGTTGATCGTTCGACCTTCGCGATGTTCATGCAACCAGATTGGTATGTGCAGTTTTCTTGACCAAATTGTAGTGTTCACATATTCTCACATGGAGAACTTTTGAGTTTCCTGCCCCTCATCCTACTAGTGACTTGCCACTTGCCAAAGCTCCCAACCAATTTCAACACATAATGTTAGCCCACATGAAGAGTACTGGTTTTCCCTCATCATTATGTGTTATGTGGGTTTGTTCATTTATACGGTCAATACTCAATAATCAATAGTAATATGCTTGCCGTTACGAATTGGGCACGTAGATTTTCAAAGCCTAGATCTGATTAATGTGGGTTTGCTGACATTTTCTTTTTATTGTGAAATATTTTGTAGGGATGAAAAGCTCAAGTTTCCAAGTGAAATTCCGTATCATCAAGAGGTTTGTTCCTAATCAGAAACTTGCATTCAGTGCTCCTGCGTGCCTTTTTCTGATATAGTAATCTATGTTTTAACTTCTGGCAGTTGATCCCACCGAATGGAACTCTTACATTCGGGGAGTATTCAGAAAGATTGGTGAACAAGTATTACCAGGGAAAGACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020333

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020333&oldid=49089"