Os12g0106700

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Revision as of 10:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0106700| Description = Similar to OsPK4| Version = NM_001072474.1 GI:115486909 GeneID:4351270| Length = 3308 bp| Definition = Oryza sativa...")
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Gene Name

Os12g0106700

Description

Similar to OsPK4

Version

NM_001072474.1 GI:115486909 GeneID:4351270

Length

3308 bp

Definition

Oryza sativa Japonica Group Os12g0106700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:354612..357919

Sequence Coding Region

354825..355504,355602..355776,355847..355927,357266..357391

Expression

GEO Profiles:Os12g0106700

Genome Context

<gbrowseImage1> name=NC_008405:354612..357919 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:354612..357919 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccctgccggcgactcccgcctacggcgccgtccatctaccgcgccacaccggtgtctccatggacaccagcgctgaggccatcttcgtcggaccatcaccgcctgttacggctgacatcgaggagtccttaagtgattacacaagtatgatggagggttggactaaagagcatgtattggcagcacgtggtcttcgtaataaggttgcgcctattcgtgttgaggccatgcgcctagggattgctgctgacagtgctggaatcacatgttttttggatgcttttgatgagtgtatgaagcgagttgatctgcatctagttactcagaagaactcatttcaagaatttcttggtagtccactacagcaaacagttccagacacttgtgcgattgtctcttccaccaagtgcgtagaggtacagcatagaagggagtacgagactatgcacgggactggctccttcccctgcaacgccgcggccccccgcaagctgcgtagggcctgcttctgccagaaggtgtggaagccgaaagaaggagctcgagtgggagatgtgattgatatgatacagaggttaggtggagcgaggacgacaagcgcaccagctccagcgccatatatgctgccagtgcgctcgtggcagcggcaccggtgggacgttggtggtggcctgactgcggaccgcatcgccgagcttcttgacacacgcgggcctttcattggaaccatatgggtatgcccatggtatgatttgttcaactcggttgaagatgaagatctggtttacaggtcaggctgtgcacggagcaagatgcttcagaggttgagcaagttctgttttggaaaggatctcgtcggccttcattcagtgttgtgctttgaataccgcatctgcgacggacaactccacatacacatcttggataaccacgagaccactggaccgcagcgatggattcatcactccgagttggaggaggtgcataccatcactgtggagcggatcaatcatcttggtgaccgccacatcaggtatccacacagcggagtgtcttga</cdnaseq>

Protein Sequence

<aaseq>MPLPATPAYGAVHLPRHTGVSMDTSAEAIFVGPSPPVTADIEES LSDYTSMMEGWTKEHVLAARGLRNKVAPIRVEAMRLGIAADSAGITCFLDAFDECMKR VDLHLVTQKNSFQEFLGSPLQQTVPDTCAIVSSTKCVEVQHRREYETMHGTGSFPCNA AAPRKLRRACFCQKVWKPKEGARVGDVIDMIQRLGGARTTSAPAPAPYMLPVRSWQRH RWDVGGGLTADRIAELLDTRGPFIGTIWVCPWYDLFNSVEDEDLVYRSGCARSKMLQR LSKFCFGKDLVGLHSVLCFEYRICDGQLHIHILDNHETTGPQRWIHHSELEEVHTITV ERINHLGDRHIRYPHSGVS</aaseq>

Gene Sequence

<dnaseqindica>2416..3095#2144..2318#1993..2073#529..654#tcagggcgccgccgccgccactcctacccaccacctgtttctcactcagtcccagctcgatctcatgcagcctcctctcgccagccacttccgtcgccatccctctgcggcggtggcggtggcggtggcggtggcggtggcggcgaggcgattgaacccgagcgaatcgtcagcagcagatcgaggcgccgtgcctgggtctcgtcagatttccagcccagcaaggcaaggcccaaggacctaaactgttgggctgttgggctcgatcaagtcagtatatgtccagggatgcggcggcccgaccacgctgcttcacgtcgggcccacctgtccgtcccttcttcggcttgaaaactccccgcatccgcgcgctcaacgtcctcctcctctgttctctcctcttctctctcgctgcgccaaggatcaagaaatcccttgccagtcgccgccgtccgtctcctcctcctcaacaccaccacaccttcggagccgcagctcatcggcggctacctcctcttcttgggtgtcatgcccctgccggcgactcccgcctacggcgccgtccatctaccgcgccacaccggtgtctccatggacaccagcgctgaggccatcttcgtcggaccatcaccgcctgttacggctgacatcgaggtgagcttatgtgccctcttggcccaagaatgtttttctttcctgcccgttcttgatgtttcttgacccatgcttttaatcccttattgccttgttcatgttcttgatgtgaaacaacggttcaatcccttactgcttaatttctttttgttaatgttcacacatctaggagaatcacgatgcaagatagttatcgttacgttcataggattgaatgcatcttcatcatatgctctgcaaatcgaatattttgatgggagggcaccctctgctgaataagtttttcttgttcttgactcttctgcataagtaattaaagccttggagcattttgttgggtccatagtggtagcgcaattgacttccaagaaaaaagtattatgccaaaacatacacctgattagacccaccctgagaagaaaatccaggagggggataaccaatatgagatgaaaatccggaagaaaacctaggaggaactcttgctggtgatgaaaatccaggagtcctacatactttaggctttgatgtgcctgaaaaaaacaattctttttgtaagtacttcctccgtttcataatgtaagactttctagcattgcccacattcatttagatgttaatgaatctagacatatgtatgtgtttagattcattaatatttatatgtatgtgggcaatgctagaaagtcttatattgtgaaacggagggagtacatatcaatcaacataaaaacacagtacattgtatcgtcaatagctccagtgctccacaatccaatcacctacactacaagattgccacgctgaattaaaagaggggagtgggtgtgcacaaacattgtattccttctgtatcctatagaacacatctagggttgaatgcatcttgaacatgctctgaaaatagaagattttgatgggagagctgcataagtttttgttgttctcgactcttctgcataagtaattgaaaccttggggcattttattgggtccatagcggtatatcaattgacttccaaggaatagtattggaagttttccgattttcgttcatctaagcaaatgcaaccctggttttccgattttcagttattaagcttccttatctaatattgtaacttgggtttccaaaaattctaggtacattttgggataatgtttgaagtttcaccttaaagttgtgctctgttgggcttgctccctgggaacagtagtctatttatatgcttatttgaatttggttagcatcagattctctggatgagcgtcgagttatgttagaatctgcttgtcatgtttattacacatttgtgatgtgattgtaagttgtaacaggagtccttaagtgattacacaagtatgatggagggttggactaaagagcatgtattggcagcacgtggtcttcgtaataaggtgagttgattgattttggcagtggacttcaattgctctactcactgtaactgataaacaattactgcaggttgcgcctattcgtgttgaggccatgcgcctagggattgctgctgacagtgctggaatcacatgttttttggatgcttttgatgagtgtatgaagcgagttgatctgcatctagttactcagaagaactcatttcaagaatttcttggtagtccactacagcaaacagttccaggtaagttaaaagttatttttggcttacatactatatatactcctccaggtaacttgtgcaggtagttatgcagtatatatttgttattctgacacagacacttgtgcgattgtctcttccaccaagtgcgtagaggtacagcatagaagggagtacgagactatgcacgggactggctccttcccctgcaacgccgcggccccccgcaagctgcgtagggcctgcttctgccagaaggtgtggaagccgaaagaaggagctcgagtgggagatgtgattgatatgatacagaggttaggtggagcgaggacgacaagcgcaccagctccagcgccatatatgctgccagtgcgctcgtggcagcggcaccggtgggacgttggtggtggcctgactgcggaccgcatcgccgagcttcttgacacacgcgggcctttcattggaaccatatgggtatgcccatggtatgatttgttcaactcggttgaagatgaagatctggtttacaggtcaggctgtgcacggagcaagatgcttcagaggttgagcaagttctgttttggaaaggatctcgtcggccttcattcagtgttgtgctttgaataccgcatctgcgacggacaactccacatacacatcttggataaccacgagaccactggaccgcagcgatggattcatcactccgagttggaggaggtgcataccatcactgtggagcggatcaatcatcttggtgaccgccacatcaggtatccacacagcggagtgtcttgacttggagtgtctttgttcgttttcgttttcgttctcactcgaaaacgaaaaacaacaaaactcacgccctcttgtgttgcgccttgtatttgttactgattcttccttttgttaatgttcttgtatatatactccgtatatcaacttccttgtaaccatatcactacatttgtcatctcctcgagaaaaaaaatattctagactatgaccacc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0106700, RefSeq:Os12g0106700