BGIOSGA020342

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Revision as of 03:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020342| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020342, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA020342

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020342, complete gene.

LocusTag

OSJNBA0001A14.4

Ensembl Transcript ID

BGIOSGA020342-TA

Ensembl Protein ID

BGIOSGA020342-PA

Length

4292

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29053820..29058111

Sequence Coding Region

29053820..29053930,29054185..29054273,29054412..29054586,29054708..29054884,29054980..29055111
,29055382..29055480,29055892..29056008,29056842..29056937,29057332..29057444
,29057991..29058111

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29053820..29058111 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29053820..29058111 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTACGGTGCAGCAACGCGTGGCGCGCTCCTCGCGGCCGCCCCGCTCTCCGGTGCCCGGCGTAGCTGGTTGCCCCTCTCATCGCCACCGTCGCCGCCCTCTATTCAGATTCAGAATCGACTTTATTCGATATCGTCGCTTCCACTAAAGGCTCGAGGCGTGAGAAGATGCGAGGCTTCTCTAGCAAGTGACTACACGAAGGCATCTGAGGTAGCTGATTTAGATTGGGAGAACCTTGGTTTTGGAATCGTGCAGACCGACTACATGTATATCACAAAATGCGGACAGGACGGGAATTTTTCTGAGGGTGAAATGATTCCATTTGGACCTATAGCACTGAACCCATCTTCTGGAGTCCTTAATTACGGACAGGGATTATTTGAAGGTCTAAAAGCATATAGAACAACAGATGACTCTATCTTATTATTTCGCCCGGAGGAAAATGCACTGAGAATGAGAATAGGTGCAGAAAGAATGTGCATGCCTGCGCCTAGTGTTGAGCAGTTTGTGGATGCAGTAAAGCAAACTGTTTTAGCAAACAAGAGATGGGTGCCTCCTACCGGTAAAGGTTCTTTGTATATTAGACCGCTACTCATGGGTAGTGGTGCTGTTCTTGGTCTTGCACCTGCTCCTGAGTATACGTTCATTATATTTGTCTCGCCTGTGGGGAACTACTTTAAGGAAGGTTTAGCTCCAATAAATTTGATAGTTGAAGATAAGTTTCATCGTGCAACCCCTGGTGGAACTGGAAGTGTGAAGACCATAGGAAATTATGCCTCGGTCTTGATGGCACAGAAGATTGCAAAAGAAAAGGGCTATTCTGATGTTCTCTACTTGGATGCTGTTCACAAAAAGTATCTTGAAGAAGTTTCTTCATGCAATATTTTTGTTGTCAAGGGCAATGTCATTTCAACTCCAGCAGTAAAAGGAACAATATTGCCAGGCATCACAAGGAAAAGTATCATTGATGTTGCTCTGAGCAAGGGTTTCCAGGTCGAGGAGCGACTTGTGTCAGTAGATGAGCTGCTTGAAGCTGATGAGGTTTTCTGCACAGGAACTGCTGTCGTAGTGTCTCCTGTGGGTAGTATTACCTATCAAGGGAAAAGGGTCGAATATGCTGGCAACAAAGGAGTTGGTGTCGTGTCTCAGCAGCTATATACTTCATTGACAAGCCTGCAGATGGGCCAGGCAGAAGATTGGCTAGGCTGGACTGTGCAACTGAGTTAG</cdnaseq>

Protein Sequence

<aaseq>MEYGAATRGALLAAAPLSGARRSWLPLSSPPSPPSIQIQNRLYSISSLPLKARGVRRCEASLASDYTKASEVADLDWENLGFGIVQTDYMYITKCGQDGNFSEGEMIPFGPIALNPSSGVLNYGQGLFEGLKAYRTTDDSILLFRPEENALRMRIGAERMCMPAPSVEQFVDAVKQTVLANKRWVPPTGKGSLYIRPLLMGSGAVLGLAPAPEYTFIIFVSPVGNYFKEGLAPINLIVEDKFHRATPGGTGSVKTIGNYASVLMAQKIAKEKGYSDVLYLDAVHKKYLEEVSSCNIFVVKGNVISTPAVKGTILPGITRKSIIDVALSKGFQVEERLVSVDELLEADEVFCTGTAVVVSPVGSITYQGKRVEYAGNKGVGVVSQQLYTSLTSLQMGQAEDWLGWTVQLS</aaseq>

Gene Sequence

<dnaseqindica>1..111#366..454#593..767#889..1065#1161..1292#1563..1661#2073..2189#3023..3118#3513..3625#4172..4292#ATGGAGTACGGTGCAGCAACGCGTGGCGCGCTCCTCGCGGCCGCCCCGCTCTCCGGTGCCCGGCGTAGCTGGTTGCCCCTCTCATCGCCACCGTCGCCGCCCTCTATTCAGGTACGCGCGTGACTAGGCCGGTATTTTGGTTTGCACGGTCTCCTGGATGCGTTTGTGCTGTAGATTTCGTGGATCATGGTGGCTAGATTGGCATGTACGGTCGAACTGGAGATTTAGGATTTGGATTATGTTGTTGTAGGTGGGGTTTGAGAAGTATTTGTGGAGATTAAATTGATGAAGTCCATGCTGTTTTTTTTATGTTCGTTTGGTATTAAAATACTGTATTTGATACTGGTGTTTTCTCGCTGGTGCAGATTCAGAATCGACTTTATTCGATATCGTCGCTTCCACTAAAGGCTCGAGGCGTGAGAAGATGCGAGGCTTCTCTAGCAAGTGACTACACGTGTGTGATTCTTACCATAAACTGCATGATTCGTTGAACCCTCCCCCTCCAGGCAGGGGGACCTGCTTGTCAAATTCGACGATGTGTTGGTCATTTCTTTCAGGAATAATTCTGATGGCAACTCTTGCATATTTTCAGGAAGGCATCTGAGGTAGCTGATTTAGATTGGGAGAACCTTGGTTTTGGAATCGTGCAGACCGACTACATGTATATCACAAAATGCGGACAGGACGGGAATTTTTCTGAGGGTGAAATGATTCCATTTGGACCTATAGCACTGAACCCATCTTCTGGAGTCCTTAATTACGGACAGGTTTGTATTGGAGGTAGATCTCCTTGCTTCATATATCCTGAGTACATTGTGGTAACTGAAGATAAGGAAAATTGAGCATTTTTAAATACTTTTTGTCCTAAAAGATTATGATTATTTGCAGGGATTATTTGAAGGTCTAAAAGCATATAGAACAACAGATGACTCTATCTTATTATTTCGCCCGGAGGAAAATGCACTGAGAATGAGAATAGGTGCAGAAAGAATGTGCATGCCTGCGCCTAGTGTTGAGCAGTTTGTGGATGCAGTAAAGCAAACTGTTTTAGCAAACAAGAGATGGGTGGGTTTACTGTAAAAAATAAATCATTTCATAGTGGGCTAGGCCGCTGTTCATACTCTTCATTTAATCATTTGTTAAATAAATTTTAATTCCAGGTGCCTCCTACCGGTAAAGGTTCTTTGTATATTAGACCGCTACTCATGGGTAGTGGTGCTGTTCTTGGTCTTGCACCTGCTCCTGAGTATACGTTCATTATATTTGTCTCGCCTGTGGGGAACTACTTTAAGGTTTGTGTTTTTTCTTTAATTCTGCTCCCTCTATTAGCCGCAGCGTTGTTGCCATAAATAAAGAAAAGCTATGGTAGATACTGTTATAATCTGCATTCTACTTGACACTGTGTTTCTGAATATATATCTTGCAGCAACTTGACCTATGAATTTATGATTTTTTTTCCACTTTTGTTGGTTGAGATAACTGATGGTTGAATGTAGAATTTCTAAACAGCTCGTGTATCATTGATTTTTTTTTTAATTTAATTTGTTCACTCATATCTTCAGGAAGGTTTAGCTCCAATAAATTTGATAGTTGAAGATAAGTTTCATCGTGCAACCCCTGGTGGAACTGGAAGTGTGAAGACCATAGGAAATTATGCCTCGGTAATTCTACAGTCAAGTTTGAAACCCATTACTTACAGCTTTGATGCGGAAGTTATTGTCATGGCTATTTCTGCAACTTCGCTACCTGATATTTCTCTTTCTGATGTTTTTGATGTAATATTTTTAGTTCAAATCTGCAAATCTTAAACTACAGAAGTCATTCTATTGATGTGAACATGTGATTGAAAGGAGTACTTTGTCAGTGCAATTATCTTAAGAACATACAGCCATTATGAATGAAGCTGTGAAATGAAAAATAATTGAACCATCAGATATATTTCAAATGGAATGCTATTTTATATGACGACTTATATCTCCTTGCTATCTTATCATTATTATTTTCTGCTATCTTGTATGTCGAATTCTGTTATTATTTTGACTGGCTTTAATTCATATACTGTCTTTGCATAGGTCTTGATGGCACAGAAGATTGCAAAAGAAAAGGGCTATTCTGATGTTCTCTACTTGGATGCTGTTCACAAAAAGTATCTTGAAGAAGTTTCTTCATGCAATATTTTTGTTGTCAAGGTGTGTTTATGCTGTCAATAATACTTGTTAGTTTGATTTGGGCACTTTCTCCTGTAGGTCCAGCTAATGCCTTTTTAGTTCTGAAAGCTACCACAGTAAATTAACCAATGCTAAGATTTGTAACCTACTATATTAACGATCAGCTTTGTTTTCTTTACTGACAGATGATGTCCTTTTTATATCTGTATAGATTAAAGAAGTTTCAAATAAATGAAATGAGTCATACGCTCTTTGAAGTAGATATTTGATACTCTTGGATTGAACAGGCTTCTGGCTCAAAACTTTTGAAAATCTGTAGCAGATAGCATGATAGTATCCAAAAAATATAGATGTGTTTTATGTGTTAGTTGCTAGCAACATCCATTAGTAAATGCATACCCTGTGGGTTAGTATATTCCTATAAATGATGGAGATAATGTGTCAAGGGATCTAATTTCATAACATTCAAACTCAAAACTGTTACCTTCTACCATGCATAAGCCTCTGTGAATTGTTACCTAAATGAAAACAACAGGCATATCCACAACACATGGTCATAGATATTGGTTCGCTAGCAATACGGTGCCATGACTATTCTATAGGAATAGGATAATACCGTACTAACAATTGGTTGTTCTATACCTACTAGGTTCAGCCAGGTTGTCTGTGTCATATCCTGAATGACAAACTATTGTTGTATTTGTTTTAGTTCACAGTGGACTTTGTATTTCCATTGCAGACAAAACATTTATTTCTTATTTTTGCGTAAGGATAGTCAGCAAATTGAAGGAATATCTTATACATGCTGCCTTTAACTGAGATCTCTTTATTATTTTTCTTGGCTTTTGCACCAGGGCAATGTCATTTCAACTCCAGCAGTAAAAGGAACAATATTGCCAGGCATCACAAGGAAAAGTATCATTGATGTTGCTCTGAGCAAGGGTTTCCAGGTAAATTAATCATCAATCCCATGAACTAACAAGCAAGATGCTTTACTATCAGTGTAGCTCAAATTAGTAGCCTGTGATTTGATAGCTTTGACAACAGCATTAGGTATTCAACATTGATCCTTTCGTATTTGCTTGGTATCCAAGTCCATGTTTCTATTTGTCCATATCATCCTTCATGTTCGTTGTGAGGGTTATCTATCTTTCAATCTACCAAGATTCATGATTAGGTTCTTATGAGCTACGGCTACATAGAAGAAGATGGAACCTATTTTTCCTAGCGATGTTGATCCAATTAGAAGCAGCAAAACACTGTTCTCAATCTGTTACTGAAAATTGTTACATCTATTCTCAGTTTTTTGGGAAATCTTCTATTAATGTATTTGGTTTCTTGAAGGTCGAGGAGCGACTTGTGTCAGTAGATGAGCTGCTTGAAGCTGATGAGGTTTTCTGCACAGGAACTGCTGTCGTAGTGTCTCCTGTGGGTAGTATTACCTATCAAGGGAAAAGGTGATACTCTTATCCTTCCTTGCATGGTTCCAAGAAATTAGCAAGCATATTAGATGAAAATTAGATTATATAACACTAAAATAGCAACAAAACACCACCCAAGCAAGTTCAACAGCCTAATGCACCATCTAATTCCTAATCGTGGTGGCTACCAGGCTCCTAGGCGGCACCCAGTGCCGACTTTTAGAACATTGCTTTCCTTGAAATTTCAGCTGTTTGCTGTATGTGTAGTCAAAAGTCAAAATTGTTTTCTTTCTTAACACCCATATTATGTATTGTTCCTCAAATATATCACCAATTAAGAACTATCTAATGGGCCGAAACCTAGCCAATACTTCACTCCATGTTCCTTGAATAAGGGAACCATCAAAGCCATATAAAAACAATTGAAAGGTGTATATTATTCACTAGTGGCTAGTAAGTCGTGGCTAACCTCTTTTGTTGGATCGCCTACTAAGATGGACTTGTCTTGGTAAAATTTCCAAAGTCAGAGAGAGCTTGTTCTTCCAAGTTCCATCATACTGTCCAATGGATTTTTCATTGCAGGGTCGAATATGCTGGCAACAAAGGAGTTGGTGTCGTGTCTCAGCAGCTATATACTTCATTGACAAGCCTGCAGATGGGCCAGGCAGAAGATTGGCTAGGCTGGACTGTGCAACTGAGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020342

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020342&oldid=49098"