BGIOSGA020354

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Revision as of 03:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020354| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020354, complete gene.| tag = OS05G05...")
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Gene Name

BGIOSGA020354

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020354, complete gene.

LocusTag

OS05G0561600

Ensembl Transcript ID

BGIOSGA020354-TA

Ensembl Protein ID

BGIOSGA020354-PA

Length

3378

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29230981..29234358

Sequence Coding Region

29230981..29231082,29231903..29232178,29233180..29234358

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29230981..29234358 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29230981..29234358 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCCCGGCGCGGCCCGCCGCAGCCTCCGTCTCCGGCGCCTTCGGCCTCTCCGCCGACCCGGCGCGGTGCTCCTTTGACCAGACGCTCCGCCGAGAGGATTTCCAGGACAACCGGCTGCTGAGGTCACTTGTTAATATCCATGAACAAGAAACTTATTCCAGAGAAATAATAACGGAAGCTATAGAGAGCTGCATGAAGAAACAAGCAGACAACTTGGTGAATACACTGGATGTCATCAGTGGGAGGCTATCACAGTTGGAGCTGTATTGCTATAAGCTGGAAAGGTCAATTGGAGAATTACGAAGTGATGTGATGGATTACCATGGTGAAGCAAATATTAACTTCCGTTGCCTCGAAAAGCATGTGAAAGAGGTTCAAAACTCTGTACAGGTGCTGCAGGATAAGCAAGAGCTTGCTGAAACCCAGAAGGAACTAACTAAACTTCAAATATTACATGAGGAATCTGCACAGAAAAGCGAAGGTACTGCTCCATCAGTTCTTATGACAAAGGAAATTGACGGCAGCATGCCAGTTGCAAAACATGAGCTTGCCCTTGTGCCTCTGCATCAAGTAAATGCTGCCCAATCTCCTGCTATGCAATTCCAAAGTTGCAATGGGCTTGTTCTGCAGCAACTGGTCCCAGTATCATTGAGCACTCAACAAGACCAGCAGCACATGAACCAAGCCACCATGTACTGTATGCAAACCCAAGCTCATGTTGAGCAAAGGCAGGCCCAACCATTTCAACCTGCACTTCAACCTGTGCAGCGACATACCCAGAATACGCCACAGACTGTAGTTGAGGCACAACAGGTGACAAGTCAGGCCCCAGACTTCTACATTCAACCTCAGCAGCAATGGGCACATCAAACTGGCCAGCAAGTTCACCAGGCAAGGCAGCCACAGCCACAGGTTGTGCAACAGCAACATTACAACAATATTCAGCAAGTTCCAGCACAGATAGTTCAAATGCAAACTTCTTCTCCACAGGCTCAAAGTGCACCACATGTCACACTGTTGTACCCTCCTTATGGATCTCAACAGCCTGCCTGTGCTAATAGTGAGCCACGCTCGCGAAGCATGGCTATGCAGCCTTCCTACTCTACAATTTCCTCGTCCCAAAGGAATCATCATGAAGTCGCTCCTGTTTATGTGCAAAGCAACACAATTTCAGTCCCACTGGCTGAGCATAGCGTCCAGTCTCCGCAGCCACCGCAACTTCAATCGCTTGGTAATGGCTCATTTAAACCAAGCAAGGTCAGCCTACATGGTGTTGCCTCATATACAGTACAGGGGAATGCCCAGGCCTATAACACTGCTTATGGAAATCCGTCCAACAATGCTGCTACTGTTGTTGCTGTCCTTCCTCAACAAGCCCAGTCTAGTGCTCCCATGGTGCTTCATCATTTAGGACCACAGTCTCTGCAGAATCATCCAATAGACATGGTTGAAAAGGTTGCTCGTATGGGTTACTTTAAGGATCAAGCTGAGAGCATGGCACTTCGAATGGCTACTGCTGGACAGAATGTAGAGTTCAAACACCTCGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MASPARPAAASVSGAFGLSADPARCSFDQTLRREDFQDNRLLRSLVNIHEQETYSREIITEAIESCMKKQADNLVNTLDVISGRLSQLELYCYKLERSIGELRSDVMDYHGEANINFRCLEKHVKEVQNSVQVLQDKQELAETQKELTKLQILHEESAQKSEGTAPSVLMTKEIDGSMPVAKHELALVPLHQVNAAQSPAMQFQSCNGLVLQQLVPVSLSTQQDQQHMNQATMYCMQTQAHVEQRQAQPFQPALQPVQRHTQNTPQTVVEAQQVTSQAPDFYIQPQQQWAHQTGQQVHQARQPQPQVVQQQHYNNIQQVPAQIVQMQTSSPQAQSAPHVTLLYPPYGSQQPACANSEPRSRSMAMQPSYSTISSSQRNHHEVAPVYVQSNTISVPLAEHSVQSPQPPQLQSLGNGSFKPSKVSLHGVASYTVQGNAQAYNTAYGNPSNNAATVVAVLPQQAQSSAPMVLHHLGPQSLQNHPIDMVEKVARMGYFKDQAESMALRMATAGQNVEFKHLA</aaseq>

Gene Sequence

<dnaseqindica>1..102#923..1198#2200..3378#ATGGCGTCCCCGGCGCGGCCCGCCGCAGCCTCCGTCTCCGGCGCCTTCGGCCTCTCCGCCGACCCGGCGCGGTGCTCCTTTGACCAGACGCTCCGCCGAGAGGTGAGCGAGATCTCTTTGTGTTCGGTGATGTTTTGCTTCGTTCTGGGTGTGTGTTGGTGAGAACGGTGGCTCGACTCTCGCCTTGGGGGGGGGGGGGGGTGCAGCTTTTTGCTGTCTGCTTCTGATTTCGTGGAGATGCGGGGAAAGGTTGGGAGTTCTCGTCTGTTGTTTGTGCGTAGCGGTGGATCTGCGAGCTCGTCAACCATTTCGATGATGTGCGAGGTTGCACACTGTTCTATGTGATTTGTTCTGACCGATTTGAATTTCAGAAATGAACGAGACAGCCCACTTTTCGTTTTCATGTGGAGATTTCGTCTTAATTTTGGCCGATTTGTGGGATTTGCGGGTGTTTCGTTACGACTAGGGTTTCACTGTTCCTTGTGCAAAACGCTAGCTGCAAATTTTTGAGGGATTTGTCCTGTGTGCTTGCTGCGGATATGCTAGGTTTGATTTACTTCTCATCGTGTTTATAATCAATCTTAGGTGTTGTCGTGACATATCACTTCTGTTGTCTTTAGATTTTTTTGGTCGTTCTACTGTTACATCTTCCGAATTTGCTTCTTCTGCTAATCATTCGTTGGGTGTGTTAGCTATCAATATACATTTCTTGTAACTTGTAAGTTGTAACCAGATGAAGATCTGGAGTCAACTTGGTGATGTTCACCCTTTATCAACACATATGAACGTATTATATTTCTTAGCTTAAATCACGTTTGCTAGGCTTTTGGCAAAATCTATATAGTTTTTCTTTTCCTTGCCATGATTCTATAGGCTCAAAACATCTGGTCCTTAGCATATTTTCCTTTCTTCAATAAAGCAGGATTTCCAGGACAACCGGCTGCTGAGGTCACTTGTTAATATCCATGAACAAGAAACTTATTCCAGAGAAATAATAACGGAAGCTATAGAGAGCTGCATGAAGAAACAAGCAGACAACTTGGTGAATACACTGGATGTCATCAGTGGGAGGCTATCACAGTTGGAGCTGTATTGCTATAAGCTGGAAAGGTCAATTGGAGAATTACGAAGTGATGTGATGGATTACCATGGTGAAGCAAATATTAACTTCCGTTGCCTCGAAAAGCATGTGAAAGAGGTATGTTGTGCTTTACATTGACATTTTGATAAGCAGTAACTGAGAATTGAGTAGCAAAGTGGTGTGGACTGAATTTTTGTGCTCTAATAGCAGCACCTTAACTATGCTTAGCTAAACTATTGTCTATTCCATTTGGACTTACAAAAATGTTGGGCAAATTATTATTCTATACTAATGATGAATACATAAGCCAATGGGAATGTAAGAGGATGACTATAGCACAAACCTCTAGTTACATAACTTTTGTATTTTTCCTCCTAGGATTTCCAGCTCCTTTTAGGATATTTAGTTAATGGTGAAAAAGGTGTATTGTAAAGTGCATAATTTACATGTGGATTTGATTTTCTCTAAACTAAAGCATATTTGCTAATTCTTCCATTTATACACGGGTTTTTAAATGAGCACCAAAGTTGGGCAAATGGTTAGGTCCATGGAGATGGAGATCACACATGTTGGTTTGAAGATTTTTATATGAAATGAGGGGTGGGAGGATGGATGTAGTGTAAAGCACTAAAGCATCACCACCTTCTTCAATTGAAAATTCAATGTAACAATACATGCATATATATTTGACTACAGGGCACATGATATATTTCGCAATTCAGCACATTTTGCAAGTAAAACAGGCCATTCTAGAACAACACAAACACATCCACCTATGGTTAGTGAAAGAATTCATGATGTGATAAGTTTCATAATGAGCTTAAGTTTAGGAACATGCTACCATCTGTCTAGATTCATAGTACTAGGATGTGTCACATCCCGTTCTAGGTTTGATTTTTGTGGGACGGAGGGAGTACTTGATTGCTTGGCTTGCTTGGTCTAGATAATTTTTCAAGTAGAACTTTGTTCTGTAGATATTGATGCATAGACAGCCAACCGGGATAAACTGCATAGCTAATATTTAACATGAATTTTCCCACTTCCTCTTGCAATTGTCTTCTTAAAAAAAAACCAAACTACTTATCATAACTCATAACTAGCACTATCTTTCTTGCCAGGTTCAAAACTCTGTACAGGTGCTGCAGGATAAGCAAGAGCTTGCTGAAACCCAGAAGGAACTAACTAAACTTCAAATATTACATGAGGAATCTGCACAGAAAAGCGAAGGTACTGCTCCATCAGTTCTTATGACAAAGGAAATTGACGGCAGCATGCCAGTTGCAAAACATGAGCTTGCCCTTGTGCCTCTGCATCAAGTAAATGCTGCCCAATCTCCTGCTATGCAATTCCAAAGTTGCAATGGGCTTGTTCTGCAGCAACTGGTCCCAGTATCATTGAGCACTCAACAAGACCAGCAGCACATGAACCAAGCCACCATGTACTGTATGCAAACCCAAGCTCATGTTGAGCAAAGGCAGGCCCAACCATTTCAACCTGCACTTCAACCTGTGCAGCGACATACCCAGAATACGCCACAGACTGTAGTTGAGGCACAACAGGTGACAAGTCAGGCCCCAGACTTCTACATTCAACCTCAGCAGCAATGGGCACATCAAACTGGCCAGCAAGTTCACCAGGCAAGGCAGCCACAGCCACAGGTTGTGCAACAGCAACATTACAACAATATTCAGCAAGTTCCAGCACAGATAGTTCAAATGCAAACTTCTTCTCCACAGGCTCAAAGTGCACCACATGTCACACTGTTGTACCCTCCTTATGGATCTCAACAGCCTGCCTGTGCTAATAGTGAGCCACGCTCGCGAAGCATGGCTATGCAGCCTTCCTACTCTACAATTTCCTCGTCCCAAAGGAATCATCATGAAGTCGCTCCTGTTTATGTGCAAAGCAACACAATTTCAGTCCCACTGGCTGAGCATAGCGTCCAGTCTCCGCAGCCACCGCAACTTCAATCGCTTGGTAATGGCTCATTTAAACCAAGCAAGGTCAGCCTACATGGTGTTGCCTCATATACAGTACAGGGGAATGCCCAGGCCTATAACACTGCTTATGGAAATCCGTCCAACAATGCTGCTACTGTTGTTGCTGTCCTTCCTCAACAAGCCCAGTCTAGTGCTCCCATGGTGCTTCATCATTTAGGACCACAGTCTCTGCAGAATCATCCAATAGACATGGTTGAAAAGGTTGCTCGTATGGGTTACTTTAAGGATCAAGCTGAGAGCATGGCACTTCGAATGGCTACTGCTGGACAGAATGTAGAGTTCAAACACCTCGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020354