BGIOSGA020357

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Revision as of 03:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020357| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020357, complete gene.| tag = OsI_209...")
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Gene Name

BGIOSGA020357

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020357, complete gene.

LocusTag

OsI_20981

Ensembl Transcript ID

BGIOSGA020357-TA

Ensembl Protein ID

BGIOSGA020357-PA

Length

4708

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29310564..29315271

Sequence Coding Region

29310564..29310848,29310938..29310994,29311110..29311280,29311396..29311480,29312110..29312200
,29312274..29312438,29312862..29312981,29313073..29313145,29314025..29314184
,29314268..29315133,29315206..29315271

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29310564..29315271 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29310564..29315271 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCGGGATCGACCTCAACACCGTCGAGGAGGACGAGGAGGAGGCGGCGGAGGAGGTGGCGGCGAACGGCTCGTCTCCGGCTCCGGCGAGGGCGGGCGCGGTGTGCCTCGAGCTGTGGCACGCCTGCGCCGGGCCCGTGGCGCCGCTGCCGAGGAAAGGGGGCGTCGTCGTGTACCTGCCGCAGGGGCATCTCGAGCACCTCGGCGACGCGCCCGCGGCGGCGGCGGCCGCGGCCGCCGTGCCGCCGCACGTCTTCTGCCGCGTCGTCGACGTCACCCTCCTCGCGGACGCGGCGACCGACGAGGTGTACGCGCAGCTCTCGCTTGTCCCGGAGAAGGAGGAGGTGGCGAGGCGGGCGGACGACGGCGAGGGCGAGGACGGGGACGGCATGAAGCAGCGGTTCGCGCGGATGCCGCACATGTTCTGCAAGACGCTCACGGCGTCCGACACCAGCACGCACGGCGGCTTCTCTGTGCCGCGCCGCGCCGCCGAGGACTGCTTCCCTCCACTGGATTACAGCCAGCAGCGGCCGTCGCAGGAGCTTGTTGCCAAGGATTTGCACGGCACTGAATGGAGGTTCCGCCATATTTACCGAGGCCAGCCACGTCGGCACCTTTTAACCACAGGTTGGAGTGCATTTGTTAACAAGAAGAAGCTTGTTTCTGGGGATGCCGTACTATTTTTGCGAGGTGATGATGGGGAACTAAGACTGGGAGTTCGCCGTGCAGCTCAGCTTAAAAATGGGTCTGCTTTTCCAGCGCTTTACAACCAGTGTTCTAATCTTGGTACACTTGCCAATGTTGCACATGCAGTGGCTACAGAAAGTGTGTTCAACATATACTACAATCCCAGGTTAAGTCAGTCCGAATTCATTGTACCCTACTGGAAGTTCATGAAAAGCCTCAGCCAACCATTTTCTGTTGGGCTGAGGTTCAAAATGAGATATGAAAGTGAAGATGCTAGTGAAAGAAGGTACACCGGGATAATTACTGGAAGTGGTGATACAGACCCTATGTGGCATGGTTCGAAATGGAAATGTTTGTTGGTGAGGTGGGATGACGACGCTGAGTTCCGTCGACCAAACAGGGTCTCTCCTTGGGAGATTGAGCTGACTAGTTCAGTGTCAGGATCCCATTTGTCCACACCCCATTCAAAGCGATTGAAACCATGTCTTCCCCATGTTAATCCAGAATACATGGTTCCACGTGGAGGTGGTTGTCCTGATTTTGCGGAATCTGCCCAATTCCACAAGGTCTTGCAAGGTCAAGAATTATTGGGTTTTAAATCTCATGGTGGTACTGCTGCTGCTACTTCTCAGCCATGTGAAGCAAGGCATTTACAGTACATTGATGAGCGGAGTTGCTCCAGCGATGCGAGTAACAGTATCCTAGGGGTTCCAAGACTTGGTGATAGAGCACCACTTGGAAACCCAGGATTTTCCTACCATTGCTCAGGCTTTGGGGAGTCTCAGAGACTCCAAAAGGTCTTGCAAGGTCAAGAATTATTTCGTCCCTACCGAGGAACTTTGGTTGATGCGTCTATGGGTAGTAATGGGTTTCATCAACAAGATAGTCCTCGTGCACCAGGTGTGGTGAATAAATGGCAGGCACAACTTCATGGCCGTGCTGCTTTTCATGGACCGCCAGCACTGGCTCTTCCATCTCAATCATCATCTCCGCCATCTGTCCTAATGTTTCAGCAAGCTAATTCAAAGATGCCCAGGTTGGAGTTTGGGCATGGACAGTTGGACAAGCACGAGAATGATAGGCGTGTTAGGTTTGGTCCTTCTGAAGGAATTGAAAGAAGAGAGCAAAGAATACCACTCCAGCCTTATCCTACTTCTGGAGAAGTGATAGATGGACAGGTTACAGTTGAGAAGTCTCACTCCCCTGGTCGACATGGAAAGGATGGTCCAGATAACAAAGCTGTTGGCACAAATAGTTGCAAAATATTTGGCATCTCTTTGACTGAGAAGGTTCCAGCAAGAGAAGAACTAGATGATGGCGACGCCAACTATTCACTCCAGTCTTTGAAGCAAGTGCCAAAATCCCTGGGCAATAGTTGTGCTACCGTTCATGAGCAAAGGCCTGTTGTTGGCAGGGTGATTGATATTTCAACTATGGATATGATGATCTGA</cdnaseq>

Protein Sequence

<aaseq>MTGIDLNTVEEDEEEAAEEVAANGSSPAPARAGAVCLELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVPPHVFCRVVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANVAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDASERRYTGIITGSGDTDPMWHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTPHSKRLKPCLPHVNPEYMVPRGGGCPDFAESAQFHKVLQGQELLGFKSHGGTAAATSQPCEARHLQYIDERSCSSDASNSILGVPRLGDRAPLGNPGFSYHCSGFGESQRLQKVLQGQELFRPYRGTLVDASMGSNGFHQQDSPRAPGVVNKWQAQLHGRAAFHGPPALALPSQSSSPPSVLMFQQANSKMPRLEFGHGQLDKHENDRRVRFGPSEGIERREQRIPLQPYPTSGEVIDGQVTVEKSHSPGRHGKDGPDNKAVGTNSCKIFGISLTEKVPAREELDDGDANYSLQSLKQVPKSLGNSCATVHEQRPVVGRVIDISTMDMMI</aaseq>

Gene Sequence

<dnaseqindica>1..285#375..431#547..717#833..917#1547..1637#1711..1875#2299..2418#2510..2582#3462..3621#3705..4570#4643..4708#ATGACCGGGATCGACCTCAACACCGTCGAGGAGGACGAGGAGGAGGCGGCGGAGGAGGTGGCGGCGAACGGCTCGTCTCCGGCTCCGGCGAGGGCGGGCGCGGTGTGCCTCGAGCTGTGGCACGCCTGCGCCGGGCCCGTGGCGCCGCTGCCGAGGAAAGGGGGCGTCGTCGTGTACCTGCCGCAGGGGCATCTCGAGCACCTCGGCGACGCGCCCGCGGCGGCGGCGGCCGCGGCCGCCGTGCCGCCGCACGTCTTCTGCCGCGTCGTCGACGTCACCCTCCTCGTGCGTCCCTTCTCAATGCTCGTATCGTACGTGTTCTCGTCTTCACGGCGGCGCGAGGGGATTGATTGGCTTTGTGTTCTTCTCTGCAGGCGGACGCGGCGACCGACGAGGTGTACGCGCAGCTCTCGCTTGTCCCGGAGAAGGAGGTGCGCGCCCGCCTGCGCGAAGCAGTTGGAGCATTTGGTTTGATGATTCCGTTTTGTTTTTTTTTTTTTTGTTTTTTGGCCTGAGTTTTCTTCTCTTCTCTTCCGGGGATTGAAGGAGGTGGCGAGGCGGGCGGACGACGGCGAGGGCGAGGACGGGGACGGCATGAAGCAGCGGTTCGCGCGGATGCCGCACATGTTCTGCAAGACGCTCACGGCGTCCGACACCAGCACGCACGGCGGCTTCTCTGTGCCGCGCCGCGCCGCCGAGGACTGCTTCCCTCCACTGGTCGGTGTATATTGGAGAAAGAAAAAGAAAAGCTTCCTTTTTTGAAGTAAAGAATTTATCTTTTTTTTGGGGGTTTGTTTAGCTGATGAAATCCTTCGGATTGGGAACCTTGCAGGATTACAGCCAGCAGCGGCCGTCGCAGGAGCTTGTTGCCAAGGATTTGCACGGCACTGAATGGAGGTTCCGCCATATTTACCGAGGTAGAGCAGAAAGAAAACATGGACTTTGAGAACAAGTTTTTTTTTTTTTAACCTGTTTTGATGACTGAGATGCTCTACGCAGCTGTGCCATGCATACATTCCATCTTCATTAGGCTTCTGTACTGTGCATGCACTTCCCCTGGCTGGAAGCCTCTGCGTCCTGAATGATTCAATGGGGATTGAATATTAGTACTGGATTTGTGCTTTAGTTGTTTCTGACGACCAGCGCGTCTTGTTCAGATAGAGCAGTAATAGCTTGTGAATACACACATGCATCAACCGAGCTCACCGAGAACTTGCACTTTGCGGTTATGATCGACATCTGTACTTTTTGCATATCCACCTGTTTTATGATGCTAAATCATGACTGGGCTGACATGATATGATTGTATGCAATGTGTTGATTCTCCAAACACTCTAATATGTGTTGGCTAGGCTACATTATGTTTCTCCATAGCTCCGACATTGTTAGTTAATCAATCATGTTTAACTGTATTTTACATTTTTTCTTCTTTCTTAAAAACCTTTGTATTGTAATGTCTGGTCCCTTCTTGAGGATTGCAAAGGACAAACATAACAAGTTAAGTGGTCCTTGATTTCTGATAGATCTACATCTGAATATGCTACAGGCCAGCCACGTCGGCACCTTTTAACCACAGGTTGGAGTGCATTTGTTAACAAGAAGAAGCTTGTTTCTGGGGATGCCGTACTATTTTTGCGGTAGGCCACTCGATCATTCAGATAATTATCACATGTTGACGATCTTTTCTAAAGATTCTTGATCAATCTGCAGAGGTGATGATGGGGAACTAAGACTGGGAGTTCGCCGTGCAGCTCAGCTTAAAAATGGGTCTGCTTTTCCAGCGCTTTACAACCAGTGTTCTAATCTTGGTACACTTGCCAATGTTGCACATGCAGTGGCTACAGAAAGTGTGTTCAACATATACTACAATCCCAGGTAATGAAGAACCTCGAGTTATTTTGTTAATGCTCCCGACAGCTGATGTTCTAGAACTTTCTTGCTGTTGGCTGGTGGCAGCCTTAAATTGTGCCCATTATTTACTGCTTGTTTGAGCTATTTGTTGATAGTCATACATTATGCCAGCTCAGCATGTGCAATCACATGGTTTTATCTGGTTGCATTTGTAGTCTTGCTGAAATTTGAAGTTAGGCGCTGTTGCAATAGCTTGGAAAGTTGTATTTGTAGGTTGTAACTGTTCTTTTTAAAACAAAAGATTATATGAACAGAATCAATAGTCTCGTTTCATATATTTATCAATGTAGTCGTTTTGCATTTGATGCTTTACAGAGCTAGCGCCTACTTCTGTTCTTGCAACAAAACAGTGTCTTATTTCAAAGCTCTCTTCTGAAATATTGACAGGTTAAGTCAGTCCGAATTCATTGTACCCTACTGGAAGTTCATGAAAAGCCTCAGCCAACCATTTTCTGTTGGGCTGAGGTTCAAAATGAGATATGAAAGTGAAGATGCTAGTGAAAGAAGGTAGATGGACAATAGTTCTACACTTGTACTAGAATGGACTGAACTGCATTCTAGATTGGTGATGCATATGTGATAACTTATAATTTTACAGGTACACCGGGATAATTACTGGAAGTGGTGATACAGACCCTATGTGGCATGGTTCGAAATGGAAATGTTTGTTGGTAAACTACCCTATCTCTTGTGCCTCGTAATATATGTTTATGGGCATCTGCTGTGTATTCAATTAACATTTTTTTTTTGTAGTGTTGCTGCCATTTCACTAATTAAACCCTTGTTTTTTCCTAGTGCCGCGTGGCATTTGCATCATGTGGCCATCTTGACTTGTTTGTTTGGATTATATTTTACATATAACAAGAATTTGATGCTAATCTTGGTTCACAAATTTGCTAGCATGGAACCCATTCACTCTATTAACTGATGTAGCAGTTGAGCTTTAGTTTACATATTACTAAAACACAGTTTAGTTGTCTTGATGCATTTTGTTTCTTATCCAAACTCAAGTCAGATAGTAGTGATTTTTCATGAACTCAATCTGGAAAGGAACAGGTTTTCAGATAATTGAGCACTGCGGTACTATTACACAATGTCAGCTTACATGGTTATGTTTTCAGAGTGACAGTTGCACTGACTAGCAAGTTTGGTTGCTCACAATAACAGTCTTAGATTTGAAGACATCAGTTAATCTTCCTGGTTTGTTTTCAAAAGTGGTAATCTTAACTTGCCATTTGACTTCCACTAGTAGTTTTTGTAGCTAGTCTAGAGCTGTGTTCTACACTCAGCCTGGTTTCTTCAGCGAAATATTAGGTGGATGAAGTTATGGACACTGCTAGCTTGATCTTCTTTTGAAATTTTACCTTCCAGGAGTACTTAGGCATGTGAAAGTTTTTAGACTATGGCTCTCCTGAGTTAAAATTTCAATTTTTGAGCACATAATTCTGTTCTCATGGCCACACCATAAGTCCCGTACAAGCCATTATTGCAATCAGATCCTCTTTATGACCATATGTATATGATTTATCGACCTATGTCTACCTTGGTAGGTGAGGTGGGATGACGACGCTGAGTTCCGTCGACCAAACAGGGTCTCTCCTTGGGAGATTGAGCTGACTAGTTCAGTGTCAGGATCCCATTTGTCCACACCCCATTCAAAGCGATTGAAACCATGTCTTCCCCATGTTAATCCAGAATACATGGTTCCACGTATGTCTTTCTTCTAGCTATTACCAGTTAATAGGATGGTTCTGTTGGATGCACTGTGCCGATTTAATTTATCCTTTTGTCAGGTGGAGGTGGTTGTCCTGATTTTGCGGAATCTGCCCAATTCCACAAGGTCTTGCAAGGTCAAGAATTATTGGGTTTTAAATCTCATGGTGGTACTGCTGCTGCTACTTCTCAGCCATGTGAAGCAAGGCATTTACAGTACATTGATGAGCGGAGTTGCTCCAGCGATGCGAGTAACAGTATCCTAGGGGTTCCAAGACTTGGTGATAGAGCACCACTTGGAAACCCAGGATTTTCCTACCATTGCTCAGGCTTTGGGGAGTCTCAGAGACTCCAAAAGGTCTTGCAAGGTCAAGAATTATTTCGTCCCTACCGAGGAACTTTGGTTGATGCGTCTATGGGTAGTAATGGGTTTCATCAACAAGATAGTCCTCGTGCACCAGGTGTGGTGAATAAATGGCAGGCACAACTTCATGGCCGTGCTGCTTTTCATGGACCGCCAGCACTGGCTCTTCCATCTCAATCATCATCTCCGCCATCTGTCCTAATGTTTCAGCAAGCTAATTCAAAGATGCCCAGGTTGGAGTTTGGGCATGGACAGTTGGACAAGCACGAGAATGATAGGCGTGTTAGGTTTGGTCCTTCTGAAGGAATTGAAAGAAGAGAGCAAAGAATACCACTCCAGCCTTATCCTACTTCTGGAGAAGTGATAGATGGACAGGTTACAGTTGAGAAGTCTCACTCCCCTGGTCGACATGGAAAGGATGGTCCAGATAACAAAGCTGTTGGCACAAATAGTTGCAAAATATTTGGCATCTCTTTGACTGAGAAGGTTCCAGCAAGAGAAGAACTAGATGATGGCGACGCCAACTATTCACTCCAGTCTTTGAAGCAAGTGCCAAAATCCCTGGGCAATAGTTGTGCTACCGTGAGTGTTTTATGATGAGTAATTTTCATGCACTCAGTAATGTAAACTGCTTTTTAACTAAAAGCTCTGCAGGTTCATGAGCAAAGGCCTGTTGTTGGCAGGGTGATTGATATTTCAACTATGGATATGATGATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020357

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020357&oldid=49113"